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>P35962_LOOPS
1-29, 42-54, 64-72, 120-149, 162-183, 211-239, 249-260, 275-294, 349-358, 381-424, 435-500
MGARASVLSA GELDKWEKIR LRPGGKKQYr lkhivwasre lERFAVDPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq kievkdtkea lekieeeqnk skkkaqqaaA DTGNSSQVSQ NYPIVQNLQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaa EWDRLHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamsqv tnsatimmqr GNFRNQRKTV KCFNCGKEGH IAKNCRAPRK KGCWKCGKEG HQMKdcterq anflGKIWPS HKGRPGNFLQ SRPEPTAPSE ESVRFGEETT TPSQKQEPID KELYPLASLR SLFGSDPSSQ
>P35962_HOTLOOPS
1-31, 120-129, 280-292, 397-410, 438-500
MGARASVLSA GELDKWEKIR LRPGGKKQYR Lkhivwasre lerfavdpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq kievkdtkea lekieeeqnk skkkaqqaaA DTGNSSQVSq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrktv kcfncgKEGH IAKNCRAPRK kgcwkcgkeg hqmkdcterq anflgkiWPS HKGRPGNFLQ SRPEPTAPSE ESVRFGEETT TPSQKQEPID KELYPLASLR SLFGSDPSSQ
>P35962_REM465
1-9, 106-128, 451-476
MGARASVLSa geldkwekir lrpggkkqyr lkhivwasre lerfavdpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq kievkdtkea lekieEEQNK SKKKAQQAAA DTGNSSQVsq nypivqnlqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrlhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrktv kcfncgkegh iakncraprk kgcwkcgkeg hqmkdcterq anflgkiwps hkgrpgnflq SRPEPTAPSE ESVRFGEETT TPSQKQepid kelyplaslr slfgsdpssq
| JOB-ID | P35962_113332Zt7dDH8AAQEAABRfHT4AAABC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P35962 |
| Description | sp|P35962|GAG_HV1Y2 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) OX=362651 GN=gag PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 500 |
| Download predictions | smoothed scores raw scores |