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>Q01641_LOOPS
10-100, 108-137, 146-162, 168-186, 192-213, 220-240, 283-337, 376-401, 431-460, 471-487, 519-530, 578-602, 613-631, 645-653, 661-703, 709-717
masliyrqlL SNSYVTNISD EVNEIGTKKT TNVTVNPGPF AQTGYAPVDW GHGELPDSTL VQPTLDGPYQ PTSLNLPVDY WMLIAPTREG KVAEGTNTTD rwfacvlVEP NVQNTQRQYV LDGQNVQLHV SNDSSTSwkf ilfikLTPYG TYTQYSTLST PHklcawMKR DNRVYWYQGA TPNASEsyyl tINNDNSNVS SDAEFYLIPQ SQTamctqyI NNGLPPIQNT RNIVPVNITS rqikdvraqm nediviskts lwkemqynrd iiirfkfans iiKSGGLGYK WSEISFKPMN YQYTYTRDEE EVTAHTTCSV NGVNDFNYNG GTLPTDFais rfevikensy vyvdywddsq afrnmvyvrs laanlNDVVC SGGSYSFALP VGNHPVMSGG Avtltsagvt lstqytdyvs lnslqfrfrl AVSEPSFSIS RTRMSGIYGL PAVNPNNSAE yyeiagrfsl ISLVPTNDDY QTPIANSvtv rqdlerqlge lreefnslsq eiavsqliDL ATLPLDMFSM fsgikstvea vksmttnvmk rfktsslana isdltsnmse aassvrlTSV RSVGTITLPR ARVSLQVGDD LRsmqdvstq vsNVSRNLRL KEFTTQTDTL Sfddisaavl ktklDKSTQI SQQtmpdiia ESSEKFIPKR SYRIVDEDIR FETGIDGTFY AYKVDTFNEI PFDmerfnKL ITDSPVLsai idfktlknln dnygitkkqa mellhsnpkt lkefinnnnp iirnrienli sqcrl
>Q01641_HOTLOOPS
22-40, 130-137, 286-295, 571-604, 609-633, 643-690, 753-763
masliyrqll snsyvtnisd eVNEIGTKKT TNVTVNPGPF aqtgyapvdw ghgelpdstl vqptldgpyq ptslnlpvdy wmliaptreg kvaegtnttd rwfacvlvep nvqntqrqyv ldgqnvqlhV SNDSSTSwkf ilfikltpyg tytqystlst phklcawmkr dnrvywyqga tpnasesyyl tinndnsnvs sdaefylipq sqtamctqyi nnglppiqnt rnivpvnits rqikdvraqm nediviskts lwkemqynrd iiirfkfans iiksgGLGYK WSEISfkpmn yqytytrdee evtahttcsv ngvndfnyng gtlptdfais rfevikensy vyvdywddsq afrnmvyvrs laanlndvvc sggsysfalp vgnhpvmsgg avtltsagvt lstqytdyvs lnslqfrfrl avsepsfsis rtrmsgiygl pavnpnnsae yyeiagrfsl islvptnddy qtpiansvtv rqdlerqlge lreefnslsq eiavsqlidl atlpldmfsm fsgikstvea vksmttnvmk rfktsslana isdltsnmse AASSVRLTSV RSVGTITLPR ARVSLQVGDD LRSMqdvsTQ VSNVSRNLRL KEFTTQTDTL SFDdisaavl ktKLDKSTQI SQQTMPDIIA ESSEKFIPKR SYRIVDEDIR FETGIDGTFY aykvdtfnei pfdmerfnkl itdspvlsai idfktlknln dnygitkkqa mellhsnpkt lkEFINNNNP IIRnrienli sqcrl
>Q01641_REM465
none
masliyrqll snsyvtnisd evneigtkkt tnvtvnpgpf aqtgyapvdw ghgelpdstl vqptldgpyq ptslnlpvdy wmliaptreg kvaegtnttd rwfacvlvep nvqntqrqyv ldgqnvqlhv sndsstswkf ilfikltpyg tytqystlst phklcawmkr dnrvywyqga tpnasesyyl tinndnsnvs sdaefylipq sqtamctqyi nnglppiqnt rnivpvnits rqikdvraqm nediviskts lwkemqynrd iiirfkfans iiksgglgyk wseisfkpmn yqytytrdee evtahttcsv ngvndfnyng gtlptdfais rfevikensy vyvdywddsq afrnmvyvrs laanlndvvc sggsysfalp vgnhpvmsgg avtltsagvt lstqytdyvs lnslqfrfrl avsepsfsis rtrmsgiygl pavnpnnsae yyeiagrfsl islvptnddy qtpiansvtv rqdlerqlge lreefnslsq eiavsqlidl atlpldmfsm fsgikstvea vksmttnvmk rfktsslana isdltsnmse aassvrltsv rsvgtitlpr arvslqvgdd lrsmqdvstq vsnvsrnlrl kefttqtdtl sfddisaavl ktkldkstqi sqqtmpdiia essekfipkr syrivdedir fetgidgtfy aykvdtfnei pfdmerfnkl itdspvlsai idfktlknln dnygitkkqa mellhsnpkt lkefinnnnp iirnrienli sqcrl
| JOB-ID | Q01641_030718Z@yp5n8AAQEAAA-GDRAAAABR |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q01641 |
| Description | sp|Q01641|VP4_ROTHJ Outer capsid protein VP4 OS=Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9]) OX=39012 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 775 |
| Download predictions | smoothed scores raw scores |