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>Q02843_LOOPS
1-28, 64-74, 118-154, 212-242, 252-262, 280-296, 338-345, 354-361, 373-469, 501-513
MGGGHSALSG RSLDTFEKIR LRPNGKKKyq ikhliwagke merfglhekl letkegcqki ievLTPLEPT GSEGlkalfn lccviwciha eqkvkdteea vvtvkqhyhl vdknekaAKK KNETTAPPGG ESRNYPVVNQ NNAWVHQPLS PRTLnawvkc veekrwgaev vpmfqalseg clsydvnqml nvigdhqgal qilkevinee aAEWDRTHRP PAGPLPAGQL RDPTGSDIAG TTssiqeqie wTFNANPRID VGaqyrkwvi lglqkvvqmY NPQKVLDIRQ GPKEPFqdyv drfykalrae qapqdvknwm tqtlliqnan pdcklilKGL GMNPTleeml iacQGVGGPQ Hkaklmvemm snGQNMVQVG PQKKGPRGPL KCFNCGKFGH MQRECKAPRQ IKCFKCGKIG HMAKDCKNGQ ANFLGYGHWG GAKPRNFVQY RGDTVGLEPT APPMETAYDp akkllqqyae kgqrlreere qtrkqkekev EDVSLSSLFG GDQ
>Q02843_HOTLOOPS
1-30, 108-135, 285-294, 379-389, 399-409, 490-513
MGGGHSALSG RSLDTFEKIR LRPNGKKKYQ ikhliwagke merfglhekl letkegcqki ievltplept gseglkalfn lccviwciha eqkvkdteea vvtvkqhYHL VDKNEKAAKK KNETTAPPGG ESRNYpvvnq nnawvhqpls prtlnawvkc veekrwgaev vpmfqalseg clsydvnqml nvigdhqgal qilkevinee aaewdrthrp pagplpagql rdptgsdiag ttssiqeqie wtfnanprid vgaqyrkwvi lglqkvvqmy npqkVLDIRQ GPKEpfqdyv drfykalrae qapqdvknwm tqtlliqnan pdcklilkgl gmnptleeml iacqgvggpq hkaklmvemm sngqnmvqVG PQKKGPRGPl kcfncgkfGH MQRECKAPRq ikcfkcgkig hmakdckngq anflgyghwg gakprnfvqy rgdtvglept appmetaydp akkllqqyae kgqrlreerE QTRKQKEKEV EDVSLSSLFG GDQ
>Q02843_REM465
1-9, 117-130, 481-513
MGGGHSALSg rsldtfekir lrpngkkkyq ikhliwagke merfglhekl letkegcqki ievltplept gseglkalfn lccviwciha eqkvkdteea vvtvkqhyhl vdknekAAKK KNETTAPPGG esrnypvvnq nnawvhqpls prtlnawvkc veekrwgaev vpmfqalseg clsydvnqml nvigdhqgal qilkevinee aaewdrthrp pagplpagql rdptgsdiag ttssiqeqie wtfnanprid vgaqyrkwvi lglqkvvqmy npqkvldirq gpkepfqdyv drfykalrae qapqdvknwm tqtlliqnan pdcklilkgl gmnptleeml iacqgvggpq hkaklmvemm sngqnmvqvg pqkkgprgpl kcfncgkfgh mqreckaprq ikcfkcgkig hmakdckngq anflgyghwg gakprnfvqy rgdtvglept appmetaydp akkllqqyae KGQRLREERE QTRKQKEKEV EDVSLSSLFG GDQ
| JOB-ID | Q02843_053910ZukV-n8AAQEAADCSImUAAAAF |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q02843 |
| Description | sp|Q02843|GAG_SIVG1 Gag polyprotein OS=Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) OX=31684 GN=gag PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 513 |
| Download predictions | smoothed scores raw scores |