Download PostScript file
>Q155Z9_LOOPS
1-21, 27-41, 80-99, 109-132, 139-176, 186-208, 229-251, 287-300, 314-384, 395-474, 482-532, 555-582, 591-615, 621-709, 724-784, 801-904, 917-929, 938-954, 983-991, 1043-1064, 1072-1080, 1113-1120, 1131-1150, 1182-1189, 1196-1204, 1218-1238, 1246-1259, 1265-1312, 1331-1353, 1361-1368, 1395-1433, 1462-1513, 1529-1541, 1553-1651, 1665-1695, 1722-1789, 1804-1811, 1818-1849, 1865-1872, 1879-1904, 1918-1936, 1946-1967, 1977-1989, 2003-2017, 2053-2065, 2077-2100, 2105-2116, 2128-2135, 2146-2170
MQNSHFSFDT ASGTFEDVTG TkvkivEYPR SVNNGVYDSS Thleilnlqg eieilrsfne yqiraakqql gldivyelqG NVQTTSKNDF DSRGNNGNMt fnyyantyQN SVDFSTSSSA SGAGPGNSRG GLaglltnFS GILNPLGYLK DHNTEEMENS ADRVTTQTAG NTAINTqssl gvlcaYVEDP TKSDPPSSST DQPTTTFTai drwytgrlns wtkavktfSF QAVPLPGAFL SRQGGLNGGA Ftatlhrhfl mkcgwqvqvq cnltqfhqga llvamvPETT LDVKPDGKAK slqelneeqw vemSDDYRTG KNMPFQSLGT YYRPPNWTWG PNFINPYQVT VFPHQILNAR TSTSVDINVP YIGETPTQSS ETQNswtllv mvlvPLDYKE GATTDPEITF SVRPTSPYFN GLRNRYTAGT DEEQGPIPTA PRENSLMFLS TLPDDTVPAY GNVRTPPVNY LPGEitdllq lARIPTLMAF ERVPEPVPAS DTYVPYVAVP TQFDDRPLIS FPITLSDPVY QNtlvgaiss nfanyrgciq itltFCGPMM ARGKFLLSYS PPNGTQPQTL SEamqctysi WDIGLNSSWT FVVPYISPSD YRETRaitns VYSADGWFSL HKLTKITLPP DCPQSPCILF FASAGEDYTL RLPVDCNPSY VFHSTDNAET GVIEAGNTDT DFSGELAAPG SNHTNVKFLf drsrllnvik vleKDAVFPR PFPTQEGAQQ DDGYFCLLTP RPTVASRPAT RFGLYANPSG SGVLANTSLD FNFYslacft yfrsdlevtv VSLEPDLEFA VGWFPSGSEY QASSFVYDQL HVPFHFTGRT PRAFASKGGK VSFVLPWNSV SSVLPVRWGG ASKLSSATRG LPAHADWGTI YAFVPRPNEK KSTAvkhvav yiryknARAW CPSMLPFRSy kqkmlmqSGD IETNPGPASD NPILefleae ndlvtlaslw kmvhsvqqtw rkYVKNDDFW Pnllselvge gsvalaatls nqasvkallg lhflsrglny tdfyslliek csSFFTVEPP PPPAENLMTK PSVKskfrkl fKMQGPMDKV kdwnqiaagl knfqfvrdlv kevvdwlqaw inKEKASPVL qyqlemkklg PVALAHDAFM AGSGPPLSDD qieylqnlks laltlgktnl aqslttmina kQSSAQRVEp vvvvlRGKPG CGKSlastli aqavskrLYG SQSVYSLPPD PDFFDGYKgq fvtlmDDLGQ NPDGQDFSTf cqmvSTAQFL PNMADLAEKG RPFTSNLIIA TTNLPHFSPV TIADPSAVSR RInydltlev seaykkhtrl NFDLAFRRTD APPIYPFAAH VPFvdvavrf KNGHQNFNll elvdsictdi rakqqgarnm qtlvLQSPNE NDDTPVDEAL GRVLSPAAVD EALVDLTPEA DPVgrlaila klglalaavt pgliilavgl yRYFSGSDAD QEETESEGSV KAPRSENAYD GPKKNSKPPG ALSLMEMQQP NVDmgfeaav akkvvvpiTF MVPNRPSGLT Qsallvtgrt flINEHTWSN PSWTSFTIRG EVHTRDEPFQ TVHFTHHGIP TDLMMVRLGP GNSFPNNLDK FGLDQMPARN SRVVGVSSSY GNFFFSGNFL GFVDSITSEQ Gtyarlfryr vttyKGWCGS ALVCEAGGVR RIIGLHSAGA AGIGAgtyis klglikalkh lgeplatmqg lMTELEPGIT VHVPRKSKLR KTTAHAVYKP EFEPAVLSKF DPRLNKDVDL DEVIWSKHTA NVPYQPPLFy tymseyahrv fsfLGKDNDI LtvkeaiLGI PGLDPMDPHT APGLPYAING LRRTDLVDFv ngtvdaalav qiqkFLDGDY SDhvfqtfLK DEIRPSEKVR AGKTRIVDVP SLAHcivgrm llgrfaaKFQ SHPGFLLGSA IGSDPDvfwt vigaqLEGRK NTYDVDYSAF DSSHGTGsfe alishfFTVD NGFSPALGPy lrslavsvha ygERRIKITG GLPSGCAats llntvlnnvi irtalaltyk efeydmvdii ayGDDLLVGT DYDLDfneva rraaklGYKM TPANKGSVFP PTSSLSDAVF lkrkFVQNND GLYKPVmdlk nleamlsYFK PGTLLeklqs vsmlaQHSGK EEYDRLMHPF ADYGAVPSHE ylqarwralf d
>Q155Z9_HOTLOOPS
1-23, 85-95, 191-206, 374-385, 402-420, 734-744, 894-904, 915-923, 1050-1062, 1180-1189, 1291-1309, 1472-1495, 1532-1541, 1554-1564, 1724-1763, 1776-1786, 1877-1901, 2077-2094
MQNSHFSFDT ASGTFEDVTG TKVkiveypr svnngvydss thleilnlqg eieilrsfne yqiraakqql gldivyelqg nvqtTSKNDF DSRGNngnmt fnyyantyqn svdfstsssa sgagpgnsrg glaglltnfs gilnplgylk dhnteemens adrvttqtag ntaintqssl gvlcayvedp TKSDPPSSST DQPTTTftai drwytgrlns wtkavktfsf qavplpgafl srqgglngga ftatlhrhfl mkcgwqvqvq cnltqfhqga llvamvpett ldvkpdgkak slqelneeqw vemsddyrtg knmpfqslgt yyrppnwtwg pnfinpyqvt vfphqilnar tstsvdinvp yigETPTQSS ETQNSwtllv mvlvpldyke gATTDPEITF SVRPTSPYFN glrnrytagt deeqgpipta prenslmfls tlpddtvpay gnvrtppvny lpgeitdllq lariptlmaf ervpepvpas dtyvpyvavp tqfddrplis fpitlsdpvy qntlvgaiss nfanyrgciq itltfcgpmm argkfllsys ppngtqpqtl seamqctysi wdiglnsswt fvvpyispsd yretraitns vysadgwfsl hkltkitlpp dcpqspcilf fasagedytl rlpvdcnpsy vfhstdnaet gvieagntdt dfsgelaapg snhtnvkflf drsrllnvik vlekdavfpr pfpTQEGAQQ DDGYfclltp rptvasrpat rfglyanpsg sgvlantsld fnfyslacft yfrsdlevtv vslepdlefa vgwfpsgsey qassfvydql hvpfhftgrt prafaskggk vsfvlpwnsv ssvlpvrwgg asklssatrg lpahadwgti yafVPRPNEK KSTAvkhvav yiryKNARAW CPSmlpfrsy kqkmlmqsgd ietnpgpasd npilefleae ndlvtlaslw kmvhsvqqtw rkyvknddfw pnllselvge gsvalaatls nqasvkallg lhflsrglny tdfyslliek cssfftvepP PPPAENLMTK PSvkskfrkl fkmqgpmdkv kdwnqiaagl knfqfvrdlv kevvdwlqaw inkekaspvl qyqlemkklg pvalahdafm agsgpplsdd qieylqnlks laltlgktnl aqslttminA KQSSAQRVEp vvvvlrgkpg cgkslastli aqavskrlyg sqsvyslppd pdffdgykgq fvtlmddlgq npdgqdfstf cqmvstaqfl pnmadlaekg rpftsnliia TTNLPHFSPV TIADPSAVSr rinydltlev seaykkhtrl nfdlafrrtd appiypfaah vpfvdvavrf knghqnfnll elvdsictdi rakqqgarnm qtlvlqspne nddtpvdeal grvlspaavd ealvdltpea dpvgrlaila klglalaavt pgliilavgl yryfsgsdad qEETESEGSV KAPRSENAYD GPKKNskppg alslmemqqp nvdmgfeaav akkvvvpitf mVPNRPSGLT Qsallvtgrt fliNEHTWSN PSWTsftirg evhtrdepfq tvhfthhgip tdlmmvrlgp gnsfpnnldk fgldqmparn srvvgvsssy gnfffsgnfl gfvdsitseq gtyarlfryr vttykgwcgs alvceaggvr riiglhsaga agigagtyis klglikalkh lgeplatmqg lmtELEPGIT VHVPRKSKLR KTTAHAVYKP EFEPAVLSKF DPRlnkdvdl deviwSKHTA NVPYQPplfy tymseyahrv fsflgkdndi ltvkeailgi pgldpmdpht apglpyaing lrrtdlvdfv ngtvdaalav qiqkfldgdy sdhvfqTFLK DEIRPSEKVR AGKTRIVDVP Slahcivgrm llgrfaakfq shpgfllgsa igsdpdvfwt vigaqlegrk ntydvdysaf dsshgtgsfe alishfftvd ngfspalgpy lrslavsvha ygerrikitg glpsgcaats llntvlnnvi irtalaltyk efeydmvdii aygddllvgt dydldfneva rraaklGYKM TPANKGSVFP PTSSlsdavf lkrkfvqnnd glykpvmdlk nleamlsyfk pgtlleklqs vsmlaqhsgk eeydrlmhpf adygavpshe ylqarwralf d
>Q155Z9_REM465
1-8, 114-125, 156-165, 191-203, 1181-1188, 1468-1497
MQNSHFSFdt asgtfedvtg tkvkiveypr svnngvydss thleilnlqg eieilrsfne yqiraakqql gldivyelqg nvqttskndf dsrgnngnmt fnyyantyqn svdFSTSSSA SGAGPgnsrg glaglltnfs gilnplgylk dhnteEMENS ADRVTtqtag ntaintqssl gvlcayvedp TKSDPPSSST DQPtttftai drwytgrlns wtkavktfsf qavplpgafl srqgglngga ftatlhrhfl mkcgwqvqvq cnltqfhqga llvamvpett ldvkpdgkak slqelneeqw vemsddyrtg knmpfqslgt yyrppnwtwg pnfinpyqvt vfphqilnar tstsvdinvp yigetptqss etqnswtllv mvlvpldyke gattdpeitf svrptspyfn glrnrytagt deeqgpipta prenslmfls tlpddtvpay gnvrtppvny lpgeitdllq lariptlmaf ervpepvpas dtyvpyvavp tqfddrplis fpitlsdpvy qntlvgaiss nfanyrgciq itltfcgpmm argkfllsys ppngtqpqtl seamqctysi wdiglnsswt fvvpyispsd yretraitns vysadgwfsl hkltkitlpp dcpqspcilf fasagedytl rlpvdcnpsy vfhstdnaet gvieagntdt dfsgelaapg snhtnvkflf drsrllnvik vlekdavfpr pfptqegaqq ddgyfclltp rptvasrpat rfglyanpsg sgvlantsld fnfyslacft yfrsdlevtv vslepdlefa vgwfpsgsey qassfvydql hvpfhftgrt prafaskggk vsfvlpwnsv ssvlpvrwgg asklssatrg lpahadwgti yafvprpnek kstavkhvav yiryknaraw cpsmlpfrsy kqkmlmqsgd ietnpgpasd npilefleae ndlvtlaslw kmvhsvqqtw rkyvknddfw pnllselvge gsvalaatls nqasvkallg lhflsrglny tdfyslliek cssfftvepp pppaenlmtk psvkskfrkl fkmqgpmdkv kdwnqiaagl knfqfvrdlv kevvdwlqaw inkekaspvl qyqlemkklg pvalahdafm agsgpplsdd qieylqnlks laltlgktnl aqslttmina KQSSAQRVep vvvvlrgkpg cgkslastli aqavskrlyg sqsvyslppd pdffdgykgq fvtlmddlgq npdgqdfstf cqmvstaqfl pnmadlaekg rpftsnliia ttnlphfspv tiadpsavsr rinydltlev seaykkhtrl nfdlafrrtd appiypfaah vpfvdvavrf knghqnfnll elvdsictdi rakqqgarnm qtlvlqspne nddtpvdeal grvlspaavd ealvdltpea dpvgrlaila klglalaavt pgliilavgl yryfsgsDAD QEETESEGSV KAPRSENAYD GPKKNSKppg alslmemqqp nvdmgfeaav akkvvvpitf mvpnrpsglt qsallvtgrt flinehtwsn pswtsftirg evhtrdepfq tvhfthhgip tdlmmvrlgp gnsfpnnldk fgldqmparn srvvgvsssy gnfffsgnfl gfvdsitseq gtyarlfryr vttykgwcgs alvceaggvr riiglhsaga agigagtyis klglikalkh lgeplatmqg lmtelepgit vhvprksklr kttahavykp efepavlskf dprlnkdvdl deviwskhta nvpyqpplfy tymseyahrv fsflgkdndi ltvkeailgi pgldpmdpht apglpyaing lrrtdlvdfv ngtvdaalav qiqkfldgdy sdhvfqtflk deirpsekvr agktrivdvp slahcivgrm llgrfaakfq shpgfllgsa igsdpdvfwt vigaqlegrk ntydvdysaf dsshgtgsfe alishfftvd ngfspalgpy lrslavsvha ygerrikitg glpsgcaats llntvlnnvi irtalaltyk efeydmvdii aygddllvgt dydldfneva rraaklgykm tpankgsvfp ptsslsdavf lkrkfvqnnd glykpvmdlk nleamlsyfk pgtlleklqs vsmlaqhsgk eeydrlmhpf adygavpshe ylqarwralf d
| JOB-ID | Q155Z9_085551ZulEF38AAQEAADCSKSsAAAAA |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q155Z9 |
| Description | sp|Q155Z9|POLG_SVV1 Genome polyprotein OS=Seneca Valley virus (isolate -/United States/SSV-001/2002) OX=686944 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2181 |
| Download predictions | smoothed scores raw scores |