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>Q1HSF8_LOOPS
1-17, 42-82, 113-145, 178-193, 199-280, 295-321, 358-403, 420-438, 443-468, 478-491, 516-523, 580-607, 699-740
MTVMGIRKNY QHCGGWGalf lgvllicsaa eqlwvtvyyg vPVWKEANTT LFCASDAKGY ETEKHNVWAT HACVPTDPSP QElvlanvte nfnmwknnmv eqmhediisl wdQSLKPCVK LTPLCVTLTC KNVTNTNGTK TNNSSektmr eemkncsfni ttnirdriqk qyalfykLDI VQIDENDNTS YRLiscntSI ITQACPKVSF EPIPIHYCAP AGFAILKCNN ETFNGTGPCK NVSTVQCTHG IRPVVSTQLL LNGSLAKGEV IIRSANFSDN aktiivqlne sviiNCTRPN NNTRKSIPIG PGRAFYATGD Iigdirqahc nvsrkqwnnt lkwvtaklre qfnktivFKN SSGGDPEIVM HSFNCGGEFF YCNTTPLFNN DTNNETEDNN NTItlqcrik qiinmwqevG KAMYAPPISG NISCSSNItg llLTRDGGHN VSDMTETFRP GGGDMKDNwr selykykVVR IEPLGIAPTK Akrrvvqrek ravglgavfi gflgaAGSTM GAAsmtltvq arqllsgivq qqnnllraie aqqhllqltv wgikqlqari laverylkdQ QLLGIWGCSG KLICPTTVPW NNSWSNKsmk viwenmtwmq wereienytg viyslieesq nqqerneqel leldkwaslw nwfditnwlw yirlfimivg glvglriifv vlsivnrvRQ GYSPLSFQIR PPAPRGPDRP EGIEEEGGER DRDTSGPLVN gfleiiwvdl rslclfsyrh lrdllliaar iveilgrrgw ealkywwnll qywsqelkns avsllnaiai avaegtdril eilqrafrai lhiptrirqg lerall
>Q1HSF8_HOTLOOPS
1-13, 128-150, 292-311, 358-366, 457-468, 478-496, 596-606, 701-718, 723-738
MTVMGIRKNY QHCggwgalf lgvllicsaa eqlwvtvyyg vpvwkeantt lfcasdakgy etekhnvwat hacvptdpsp qelvlanvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtLTC KNVTNTNGTK TNNSSEKTMR eemkncsfni ttnirdriqk qyalfykldi vqidendnts yrliscntsi itqacpkvsf epipihycap agfailkcnn etfngtgpck nvstvqcthg irpvvstqll lngslakgev iirsanfsdn aktiivqlne sVIINCTRPN NNTRKSIPIG Pgrafyatgd iigdirqahc nvsrkqwnnt lkwvtaklre qfnktivFKN SSGGDPeivm hsfncggeff ycnttplfnn dtnnetednn ntitlqcrik qiinmwqevg kamyappisg niscssnitg llltrdgghn vsdmteTFRP GGGDMKDNwr selykykVVR IEPLGIAPTK AKRRVVqrek ravglgavfi gflgaagstm gaasmtltvq arqllsgivq qqnnllraie aqqhllqltv wgikqlqari laverylkdq qllgiwgcsg klicpTTVPW NNSWSNksmk viwenmtwmq wereienytg viyslieesq nqqerneqel leldkwaslw nwfditnwlw yirlfimivg glvglriifv vlsivnrvrq GYSPLSFQIR PPAPRGPDrp egIEEEGGER DRDTSGPLvn gfleiiwvdl rslclfsyrh lrdllliaar iveilgrrgw ealkywwnll qywsqelkns avsllnaiai avaegtdril eilqrafrai lhiptrirqg lerall
>Q1HSF8_REM465
639-647, 713-733
mtvmgirkny qhcggwgalf lgvllicsaa eqlwvtvyyg vpvwkeantt lfcasdakgy etekhnvwat hacvptdpsp qelvlanvte nfnmwknnmv eqmhediisl wdqslkpcvk ltplcvtltc knvtntngtk tnnssektmr eemkncsfni ttnirdriqk qyalfykldi vqidendnts yrliscntsi itqacpkvsf epipihycap agfailkcnn etfngtgpck nvstvqcthg irpvvstqll lngslakgev iirsanfsdn aktiivqlne sviinctrpn nntrksipig pgrafyatgd iigdirqahc nvsrkqwnnt lkwvtaklre qfnktivfkn ssggdpeivm hsfncggeff ycnttplfnn dtnnetednn ntitlqcrik qiinmwqevg kamyappisg niscssnitg llltrdgghn vsdmtetfrp gggdmkdnwr selykykvvr ieplgiaptk akrrvvqrek ravglgavfi gflgaagstm gaasmtltvq arqllsgivq qqnnllraie aqqhllqltv wgikqlqari laverylkdq qllgiwgcsg klicpttvpw nnswsnksmk viwenmtwmq wereienytg viyslieeSQ NQQERNEqel leldkwaslw nwfditnwlw yirlfimivg glvglriifv vlsivnrvrq gysplsfqir ppAPRGPDRP EGIEEEGGER DRDtsgplvn gfleiiwvdl rslclfsyrh lrdllliaar iveilgrrgw ealkywwnll qywsqelkns avsllnaiai avaegtdril eilqrafrai lhiptrirqg lerall
| JOB-ID | Q1HSF8_053004ZukT3H8AAQEAADCTky4AAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q1HSF8 |
| Description | tr|Q1HSF8|Q1HSF8_9HIV1 Envelope glycoprotein gp160 OS=Human immunodeficiency virus 1 OX=11676 GN=env PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 846 |
| Download predictions | smoothed scores raw scores |