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>Q3I0Y8_LOOPS
1-11, 99-108, 136-155, 164-237, 249-256, 287-307, 318-330, 355-408, 435-491, 508-523, 530-538, 559-579, 599-611, 618-649, 664-695, 712-724, 790-814, 823-831, 843-851, 884-895, 911-955, 963-973, 1008-1133, 1142-1152, 1208-1217, 1305-1314, 1366-1379, 1395-1405, 1432-1469, 1482-1491, 1503-1525, 1559-1599, 1606-1665, 1673-1690, 1696-1708, 1743-1761, 1772-1802, 1820-1852, 1858-1872, 1896-1910, 1918-1953, 1964-1993, 2002-2032, 2062-2084, 2092-2105, 2119-2127, 2135-2143, 2199-2207, 2242-2253, 2275-2283, 2291-2314, 2332-2341, 2352-2363, 2426-2442, 2460-2467, 2500-2507, 2521-2535, 2572-2586, 2598-2619, 2628-2647, 2657-2685, 2700-2710, 2730-2745, 2772-2805, 2819-2849, 2858-2901, 2918-2926, 2954-2962, 2981-3000, 3018-3041, 3051-3073, 3109-3119, 3124-3132, 3154-3177, 3190-3207, 3224-3243, 3251-3282, 3314-3338, 3352-3385, 3420-3432
MSKKPGGPGK Sravnmlkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkelgt ltsainrrSS KQKKRGGKtg iavmiglias vgavtlsnfq gkvmmTVNAT DVTDVITIPT AAGKNlcivr amdVGYMCDD TITYECPVLS AGNDPEDIDC WCTKSAVYVR YGRCTKTRHS RRSRRSLTVQ THGESTLANK KGAWMDStka trylvkteSW ILRNPGyalv aavigwmlgs ntmqrvvfvv llllvaPAYS FNCLGMSNRD FLEGVSGatw vdlvlegDSC VTIMSKDKPT idvkmmnmea anlaevrsyc ylatVSDLST KAACPTMGEA HNDKRADPAF VCRQGVVDRG WGNGCGLFGK GSIDTCAKfa cstkaigrti lkenikyeva ifvhGPTTVE SHGNYSTQVG ATQAGRFSIT PAAPSYTLKL GEYGEVTVDC EPRSGIDTNA Yyvmtvgtkt flvhrewFMD LNLPWSSAGS TVWrnretlM EFEEPHATkq svialgsqeg alhqalagAI PVEFSSNTVK LTSGHLKCRv kmeklqlkgt tygvcskaFK FLGTPADTGH GtvvlelQYT GTDGPCKVPI SSVASLNDLT PVGRLVTVNp fvsvatanak vliELEPPFG DSYIVVGRGE QQINHHWHKS GSSIGkaftt tlkgaqrlaa lGDTAWDFGS VGGVftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvH ADTGCAIDIS RQELRCGSGV FIHNdveawm drYKYYPETP Qglakiiqka hkEGVCGLRS Vsrlehqmwe avkdelntll kengvdlsvv vekQEGMYKS APKRLtatte kleigwkawg KSILFAPELA NNTFVVDGPE TKECPTQNRA WNSLEVEDFG FGLTStrmfl kvRESNTTEC DSKiigtavk nnlaihsdls ywiesrlndt wkleravLGE VKSCTWPETH TLWGDGILES DLIIPVTLAG PRSNHNRRPG YKTQNQGPWD EGRVEIDFDY CPGTTVTLSE SCGHRGPATR TTTESGKLIT DWCCRSCTLP PLRYQTDSGC WYGMEIRPQR HDEktlvqsq vNAYNADMID PFqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry vilvgaaFAE SNSGGDVvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalLTPGLR CLNLdvyril llmvgigsli rekrsaaakk kgasllclal astglfnpmi laaglIACDP NRKRGWPATe vmtavglmfa ivggLAELDI DSMAIpmtia glmfaafvis gkstdmwier tADISWESDA EITGSSERVD VRLDDDGDFQ LMNDPGAPWk iwmlrmvcla iSAYTPWAIL Psvvgfwitl qyTKRGGVLW DTPSPKEYKK GDTTTgvyri mtrgllgsyq agagvmvegv fhtlwhttKG AALMSGEGRL DPYWGSVKED RLCYGGPWKL QHKWNGQDEv qmivvEPGKN VKNVQTKPGV FKTPEGEIGA VTLDFPTGTS GSPIVDKNGD VIGLYGNGVI MPNGSyisai vqGERMDEPI PAGFEPEMLR kkqitVLDLH PGAGKTRRil pqiikeainr rlrtavlapt rvvaaemaea lrGLPIRYQT SAVPREHNGN Eivdvmchat lTHRLMSPHR VPNYNLFVMD EAHFTDPASI AArgyistkv elgeaaaifM TATPPGTSDP FPESNSPISD LQTEIPDRAW NSgyewiTEY TGKTVWFVPS VKmgneialc lqragkkvvq lnrksYETEY PKCKNDDWDF vittdisEMG ANFKASRVID SRKSVKPTII TEGEGRVILG EPSavtaasa aqrRGRIGRN PSQVGDEYCY GGHTNEDDSN FAHwtearim lDNINMPNGL IAQFYQPERE KVYTMDGEYR LRgeerknfl ellrtadlpv wlaykvaaag vSYHDRRWCF DGPRTNTILE DNNEvevitk lGERKILRPR WIDARvysdh qalkafkdFA SGKRSQIgli evlgKMPEHF MGKtwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrKG IGKIGLGgav lgvatffcwm aevpgtkiag mlllslllmi vLIPEPEKQR SQTdnqlavf licvmtlvsa vaanEMGWLD KTKsdisslf GQRIEVKENF SMGEFLLDLR PATAwslyav ttavltpllk hLITSDYINT Sltsinvqas aLFTLSRGFP FVDvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdGIVAT DVPELERTTP IMqkkvgqim lilvslaavV VNPSVKTvre agilitaaav tlwengassv wnattaiglC HIMRGGWlsc lsitwtlikn MEKPGLKRGG AKGRTlgevw kerlnqmtke eftryrkeai ievdrsaakh aRKEGNVTGG HPVSRGtakl rwlverrFLE PVGKVIDLGC GRGGWCYYMa tqkrvqeVRG YTKGGPGHEE PQLVQSYgwn ivtmksGVDV FYRPSECCDT LLCDIGESSS SAEVEehrti rvlemvedwL HRGPREFCVK vlcpympkvi ekmellqrrY GGGLVRNPLS RNSTHemywv srasgnvvhs vnmtsqvllg rMEKRTWKGP QYEEDVNLGS GTRAVGKPLL NSDTSkiknr ierlrreySS TWHHDENHPY RTWNYHGSYD VKPTGSASSl vngvvrlLSK PWDTITNVTT MAMTDTTPFG QQRVFKEKVD TKAPEPPEGV Kyvlnettnw lwaflarEKR PRMCSReefi rkvnsnaalg amfeeqnqwr sarEAVEDPK FWemvdeera hlrgechtci YNMMGKREKK PGEFGKAKGS raiwfmwlga rflefeaLGF LNEDHWLGRK NSGGGVEGLG Lqklgyilre VGTRPGGKIY ADDTAGWDTR ITRadlenea kvlelldgeh rrlaraiiel tyrhkvvkVM RPAADGRTVm dviSREDQRG SGqvvtyaln tftnlavqlv rmmEGEGVIG PDDVEKLTKG KGPKVRTwlf engeerlsrM AVSGDDCVVK PLDDRFAtsl hflnamskvr kdiQEWKPST GWYDWQQVPF CSNhftelim KDGRTLVVPC RGQDELVGRA RISPGAGWNV RDtaclaksy aqmwlllyfh rrdlrlmana icsAVPVNWV PTGRTTWSIH AGGEWMTTed mlevwnrvwi eENEWMEDKT PVEKWSDVPY SGKREDIWCG SLIGTrarat waeniqvain qvraiigdek yvdymsslkR YEDTTLVEDT VL
>Q3I0Y8_HOTLOOPS
1-17, 88-109, 145-156, 195-237, 370-378, 483-492, 881-899, 933-946, 1040-1063, 1077-1100, 1433-1451, 1505-1526, 1607-1628, 1696-1710, 1896-1907, 1920-1953, 1960-1973, 2073-2101, 2116-2124, 2521-2539, 2566-2587, 2675-2688, 2774-2809, 2817-2832, 2888-2904, 2982-2997, 3052-3069, 3098-3120, 3158-3177, 3267-3279, 3316-3324, 3330-3338, 3353-3374, 3418-3432
MSKKPGGPGK SRAVNMLkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkeLGT LTSAINRRSS KQKKRGGKTg iavmiglias vgavtlsnfq gkvmmtvnat dvtdVITIPT AAGKNLcivr amdvgymcdd tityecpvls agndpedidc wctkSAVYVR YGRCTKTRHS RRSRRSLTVQ THGESTLANK KGAWMDStka trylvktesw ilrnpgyalv aavigwmlgs ntmqrvvfvv llllvapays fnclgmsnrd flegvsgatw vdlvlegdsc vtimskdkpt idvkmmnmea anlaevrsyc ylatvsdlst kaacptmgeA HNDKRADPaf vcrqgvvdrg wgngcglfgk gsidtcakfa cstkaigrti lkenikyeva ifvhgpttve shgnystqvg atqagrfsit paapsytlkl geygevtvdc epRSGIDTNA YYvmtvgtkt flvhrewfmd lnlpwssags tvwrnretlm efeephatkq svialgsqeg alhqalagai pvefssntvk ltsghlkcrv kmeklqlkgt tygvcskafk flgtpadtgh gtvvlelqyt gtdgpckvpi ssvaslndlt pvgrlvtvnp fvsvatanak vlieleppfg dsyivvgrge qqinhhwhks gssigkaftt tlkgaqrlaa lgdtawdfgs vggvftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvh adtgcaidis rqelrcgsgv fihndveawm drykyypetp qglakiiqka hkegvcglrs vsrlehqmwe avkdelntll kengvdlsvv VEKQEGMYKS APKRLTATTe kleigwkawg ksilfapela nntfvvdgpe tkECPTQNRA WNSLEVedfg fgltstrmfl kvresnttec dskiigtavk nnlaihsdls ywiesrlndt wkleravlge vksctwpeth tlwgdgiles dliipvtlaG PRSNHNRRPG YKTQNQGPWD EGRveidfdy cpgttvTLSE SCGHRGPATR TTTESGKLIT dwccrsctlp plryqtdsgc wygmeirpqr hdektlvqsq vnaynadmid pfqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry vilvgaafae snsggdvvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalltpglr clnldvyril llmvgigsli rekrsaaakk kgasllclal astglfnpmi laagliacdp nrkrgwpate vmtavglmfa ivgglaeldi dsmaipmtia glmfaafvis gkstdmwier taDISWESDA EITGSSERVD Vrldddgdfq lmndpgapwk iwmlrmvcla isaytpwail psvvgfwitl qytkRGGVLW DTPSPKEYKK GDTTTGvyri mtrgllgsyq agagvmvegv fhtlwhttkg aalmsgegrl dpywgsvked rlcyggpwkl qhkwngqdev qmivvePGKN VKNVQTKPGV FKTPEGEIga vtldfptgts gspivdkngd viglygngvi mpngsyisai vqgermdepi pagfepemlr kkqitVLDLH PGAGKTRRIL pqiikeainr rlrtavlapt rvvaaemaea lrglpiryqt savprehngn eivdvmchat lthrlmsphr vpnynlfvmd eahftdpasi aargyistkv elgeaaaifm tatppgtsdp fpesnspisd lqteipdraw nsgyewitey tgktvwfvps vkmgneialc lqragkkvvq lnrksYETEY PKCKNDDwdf vittdisemG ANFKASRVID SRKSVKPTII TEGEGRVILG EPSavtaasA AQRRGRIGRN PSQvgdeycy gghtneddsn fahwtearim ldninmpngl iaqfyqpere kvytmdgeyr lrgeerknfl ellrtadlpv wlaykvaaag vsyhdrrwcf dgPRTNTILE DNNEVEVITK LGERKILRPR Widarvysdh qalkaFKDFA SGKRsqigli evlgkmpehf mgktwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrkg igkiglggav lgvatffcwm aevpgtkiag mlllslllmi vlipepekqr sqtdnqlavf licvmtlvsa vaanemgwld ktksdisslf gqrievkenf smgeflldlr patawslyav ttavltpllk hlitsdyint sltsinvqas alftlsrgfp fvdvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdgivat dvpelerttp imqkkvgqim lilvslaavv vnpsvktvre agilitaaav tlwengassv wnattaiglc himrggwlsc lsitwtlikn MEKPGLKRGG AKGRTLGEVw kerlnqmtke eftryrkeai ievdrSAAKH ARKEGNVTGG HPVSRGTakl rwlverrfle pvgkvidlgc grggwcyyma tqkrvqevrg ytkggpghee pqlvqsygwn ivtmksgvdv fyrpseccdt llcdIGESSS SAEVEEHRti rvlemvedwl hrgprefcvk vlcpympkvi ekmellqrry ggglvrnpls rnsthemywv srasgnvvhs vnmtsqvllg rmeKRTWKGP QYEEDVNLGS GTRAVGKPLL NSDTSKIKNr ierlrrEYSS TWHHDENHPY RTwnyhgsyd vkptgsassl vngvvrllsk pwdtitnvtt mamtdttpfg qqrvfkeKVD TKAPEPPEGV KYVLnettnw lwaflarekr prmcsreefi rkvnsnaalg amfeeqnqwr sareavedpk fwemvdeera hlrgechtci yNMMGKREKK PGEFGKAkgs raiwfmwlga rflefealgf lnedhwlgrk nsgggveglg lqklgyilre vGTRPGGKIY ADDTAGWDTr itradlenea kvlelldgeh rrlaraiIEL TYRHKVVKVM RPAADGRTVM dvisredqrg sgqvvtyaln tftnlavqlv rmmegegVIG PDDVEKLTKG KGPKVRTwlf engeerlsrm avsgddcvvk plddrfatsl hflnamskvr kdiqewkpst gwydwqqvpf csnhftelim kdgrtlvvpc rgqdelVGRA RISPGAGWNv rdtaclaksy aqmwlllyfh rrdlrlmana icsavPVNWV PTGRttwsiH AGGEWMTTed mlevwnrvwi eeNEWMEDKT PVEKWSDVPY SGKRediwcg sligtrarat waeniqvain qvraiigdek yvdymssLKR YEDTTLVEDT VL
>Q3I0Y8_REM465
1-10, 97-107, 205-223, 1080-1092, 1333-1341, 1826-1837, 1955-1965, 2565-2582, 2678-2686
MSKKPGGPGK sravnmlkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkelgt ltsainRRSS KQKKRGGktg iavmiglias vgavtlsnfq gkvmmtvnat dvtdvitipt aagknlcivr amdvgymcdd tityecpvls agndpedidc wctksavyvr ygrcTKTRHS RRSRRSLTVQ THGestlank kgawmdstka trylvktesw ilrnpgyalv aavigwmlgs ntmqrvvfvv llllvapays fnclgmsnrd flegvsgatw vdlvlegdsc vtimskdkpt idvkmmnmea anlaevrsyc ylatvsdlst kaacptmgea hndkradpaf vcrqgvvdrg wgngcglfgk gsidtcakfa cstkaigrti lkenikyeva ifvhgpttve shgnystqvg atqagrfsit paapsytlkl geygevtvdc eprsgidtna yyvmtvgtkt flvhrewfmd lnlpwssags tvwrnretlm efeephatkq svialgsqeg alhqalagai pvefssntvk ltsghlkcrv kmeklqlkgt tygvcskafk flgtpadtgh gtvvlelqyt gtdgpckvpi ssvaslndlt pvgrlvtvnp fvsvatanak vlieleppfg dsyivvgrge qqinhhwhks gssigkaftt tlkgaqrlaa lgdtawdfgs vggvftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvh adtgcaidis rqelrcgsgv fihndveawm drykyypetp qglakiiqka hkegvcglrs vsrlehqmwe avkdelntll kengvdlsvv vekqegmyks apkrltatte kleigwkawg ksilfapela nntfvvdgpe tkecptqnra wnslevedfg fgltstrmfl kvresnttec dskiigtavk nnlaihsdls ywiesrlndt wkleravlge vksctwpeth tlwgdgiles dliipvtlag prsnhnrrpg yktqnqgpwd egrveidfdy cpgttvtlsE SCGHRGPATR TTtesgklit dwccrsctlp plryqtdsgc wygmeirpqr hdektlvqsq vnaynadmid pfqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry vilvgaafae snsggdvvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalltpglr clnldvyril llmvgigsli reKRSAAAKK Kgasllclal astglfnpmi laagliacdp nrkrgwpate vmtavglmfa ivgglaeldi dsmaipmtia glmfaafvis gkstdmwier tadiswesda eitgsservd vrldddgdfq lmndpgapwk iwmlrmvcla isaytpwail psvvgfwitl qytkrggvlw dtpspkeykk gdtttgvyri mtrgllgsyq agagvmvegv fhtlwhttkg aalmsgegrl dpywgsvked rlcyggpwkl qhkwngqdev qmivvepgkn vknvqtkpgv fktpegeiga vtldfptgts gspivdkngd viglygngvi mpngsyisai vqgermdepi pagfepemlr kkqitvldlh pgagktrril pqiikeainr rlrtavlapt rvvaaemaea lrglpiryqt savprehngn eivdvmchat lthrlmsphr vpnynlfvmd eahftdpasi aargyistkv elgeaaaifm tatppGTSDP FPESNSPisd lqteipdraw nsgyewitey tgktvwfvps vkmgneialc lqragkkvvq lnrksyetey pkcknddwdf vittdisemg anfkasrvid srksvkptii tegegrvilg epsaVTAASA AQRRGrigrn psqvgdeycy gghtneddsn fahwtearim ldninmpngl iaqfyqpere kvytmdgeyr lrgeerknfl ellrtadlpv wlaykvaaag vsyhdrrwcf dgprtntile dnnevevitk lgerkilrpr widarvysdh qalkafkdfa sgkrsqigli evlgkmpehf mgktwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrkg igkiglggav lgvatffcwm aevpgtkiag mlllslllmi vlipepekqr sqtdnqlavf licvmtlvsa vaanemgwld ktksdisslf gqrievkenf smgeflldlr patawslyav ttavltpllk hlitsdyint sltsinvqas alftlsrgfp fvdvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdgivat dvpelerttp imqkkvgqim lilvslaavv vnpsvktvre agilitaaav tlwengassv wnattaiglc himrggwlsc lsitwtlikn mekpglkrgg akgrtlgevw kerlnqmtke eftryrkeai ievdRSAAKH ARKEGNVTGG HPvsrgtakl rwlverrfle pvgkvidlgc grggwcyyma tqkrvqevrg ytkggpghee pqlvqsygwn ivtmksgvdv fyrpseccdt llcdigeSSS SAEVEEhrti rvlemvedwl hrgprefcvk vlcpympkvi ekmellqrry ggglvrnpls rnsthemywv srasgnvvhs vnmtsqvllg rmekrtwkgp qyeedvnlgs gtravgkpll nsdtskiknr ierlrreyss twhhdenhpy rtwnyhgsyd vkptgsassl vngvvrllsk pwdtitnvtt mamtdttpfg qqrvfkekvd tkapeppegv kyvlnettnw lwaflarekr prmcsreefi rkvnsnaalg amfeeqnqwr sareavedpk fwemvdeera hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rflefealgf lnedhwlgrk nsgggveglg lqklgyilre vgtrpggkiy addtagwdtr itradlenea kvlelldgeh rrlaraiiel tyrhkvvkvm rpaadgrtvm dvisredqrg sgqvvtyaln tftnlavqlv rmmegegvig pddvekltkg kgpkvrtwlf engeerlsrm avsgddcvvk plddrfatsl hflnamskvr kdiqewkpst gwydwqqvpf csnhftelim kdgrtlvvpc rgqdelvgra rispgagwnv rdtaclaksy aqmwlllyfh rrdlrlmana icsavpvnwv ptgrttwsih aggewmtted mlevwnrvwi eenewmedkt pvekwsdvpy sgkrediwcg sligtrarat waeniqvain qvraiigdek yvdymsslkr yedttlvedt vl
| JOB-ID | Q3I0Y8_192224ZwrMcH8AAQEAAGAGWe4AAAAT |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q3I0Y8 |
| Description | tr|Q3I0Y8|Q3I0Y8_WNV Genome polyprotein OS=West Nile virus OX=11082 PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 3432 |
| Download predictions | smoothed scores raw scores |