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>Q5EG65_LOOPS
1-125, 130-143, 161-173, 185-211, 221-258, 287-315, 381-391, 400-409, 419-436, 444-625, 644-688, 776-786
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PKGRNWAQPG YPWPLYGNEG CGWAGWLPSP RGSRPSWGPN DPRRRSRNLG KVIDTltcgF VDLMGYIPLV GAPlrgaara lahgvrvled GVNYATGNLP GCSfsiflla llscLTVPAS AYQVRNSTGL YHVTNDCPNS Sivyeavdai LHTPGCVPCV REGNASRCWV AMTPTVATRD GRLPTTQLrr hidllvgsat lcsalyvgdl cgsvflVGQL FTFSPRRHWT TQGCNCSIYP GHITGhrmaw dmmmnwsptt alvvaqllri pqaildmiag ahwgvlagma yfsmvgnwak vlavlllfag VDAETHVTGG AaarstlqlA GLFQPGAKQn vqlintngSW HVNRTALNCN DSLNTGwiag lfyYHGFNSS GCSERLASCR SLTDFDQGWG PISYAGGGGP DHRPYCWHYP PKPCGIVPAK SVCGPVYCFT PSPVVVGTTD RSGAPTYSWG ADDTDVFVLN NTRPPLGNWF GCTWMNSTGF TKVCGAPPCV IGGVGNNTLH CPTDCFRKHP EATYSRCGSG PWLTPRCLVD YPYRLWHYPC TINHSifkvr myvggvehrl daaCNWTRGE RCDLEDRDRS ELSPLLLSTT QWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvvlnaasla gthglvsflv ffcfaWFLRG KWVPGAvyal ygmwplllll lalpqrayal dtevaascgg vvlvglmal
>Q5EG65_HOTLOOPS
1-77, 103-121, 244-255, 294-305, 593-604
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PKGRNWAqpg ypwplygneg cgwagwlpsp rgSRPSWGPN DPRRRSRNLG Kvidtltcgf vdlmgyiplv gaplrgaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivyeavdai lhtpgcvpcv regnasrcwv amtPTVATRD GRLPTtqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfSPRRHWT TQGCNcsiyp ghitghrmaw dmmmnwsptt alvvaqllri pqaildmiag ahwgvlagma yfsmvgnwak vlavlllfag vdaethvtgg aaarstlqla glfqpgakqn vqlintngsw hvnrtalncn dslntgwiag lfyyhgfnss gcserlascr sltdfdqgwg pisyaggggp dhrpycwhyp pkpcgivpak svcgpvycft pspvvvgttd rsgaptyswg addtdvfvln ntrpplgnwf gctwmnstgf tkvcgappcv iggvgnntlh cptdcfrkhp eaTYSRCGSG PWLTprclvd ypyrlwhypc tinhsifkvr myvggvehrl daacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvvlnaasla gthglvsflv ffcfawflrg kwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglmal
>Q5EG65_REM465
1-17, 47-74
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PKGRnwaqpg ypwplygneg cgwagwlpsp rgsrpswgpn dprrrsrnlg kvidtltcgf vdlmgyiplv gaplrgaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivyeavdai lhtpgcvpcv regnasrcwv amtptvatrd grlpttqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfsprrhwt tqgcncsiyp ghitghrmaw dmmmnwsptt alvvaqllri pqaildmiag ahwgvlagma yfsmvgnwak vlavlllfag vdaethvtgg aaarstlqla glfqpgakqn vqlintngsw hvnrtalncn dslntgwiag lfyyhgfnss gcserlascr sltdfdqgwg pisyaggggp dhrpycwhyp pkpcgivpak svcgpvycft pspvvvgttd rsgaptyswg addtdvfvln ntrpplgnwf gctwmnstgf tkvcgappcv iggvgnntlh cptdcfrkhp eatysrcgsg pwltprclvd ypyrlwhypc tinhsifkvr myvggvehrl daacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvvlnaasla gthglvsflv ffcfawflrg kwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglmal
| JOB-ID | Q5EG65_055911Zukarn8AAQEAADCTliIAAABY |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q5EG65 |
| Description | sp|Q5EG65|POLG_HCVGL Genome polyprotein (Fragment) OS=Hepatitis C virus (isolate Glasgow) OX=329389 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 829 |
| Download predictions | smoothed scores raw scores |