Download PostScript file
>Q5NTZ0_LOOPS
1-23, 48-66, 96-106, 125-146, 166-210, 215-253, 262-270, 294-307, 328-340, 365-403, 414-427, 435-448, 459-468, 494-529, 544-564, 593-600, 608-616, 638-654, 664-678, 707-746, 756-766, 774-782, 828-835, 850-867, 900-936, 950-976, 983-1002, 1020-1035
MDIRPRLRIG QINLGGAEDA TRElpsiard lgldivlvqe qysmvgfLAQ CGAHPKAGVY IRNRVLpcav lhhlssthit vvhiggwdly mvsayFQYSD PIDPYLhrlg nildrlrgar vvicADTNAH SPLWHSLPRH YVGRGQevad rrakmedfig arrlvVHNAD GHLPTFSTAN GESYVDVTLS TRGVRVSEWR VTNESSSDHR livfGVGGGT TGERDEDEEA RSDLRPGEPC ALRRYRDRGV DWDlfrsrih eRMGSLDLEE pvaalcekft gvitrtaeec lgsLKADRTD RGYEWWTpvl dklrvaqgra rrrwqkaRRT GGEEEEQSGR vfrdrrreyr ramhdaetaf yreiAEGGNR DPWGLAYRTA SGRRRAPTNV VNGVEYAGRC SDDvsgamrt lmwALCPDDY MSRDTPYhar vrimAALPPS GRDADPLSkd slraiigsLK NTAPGIDGlt ariikkalpa aeaefvavya rcvVEGTFPP VWKDGRLLVL PKGNGRPLTD PKAYRPVTLl pvlgkilekv llqCAPGLTH SISPRQHGFS PGRStvtalr tlldvsrase qryvmaifld isGAFDNAWW pmimvkaKRN CPPNIYrmlt dyfrgrriav vagecaeWKV STMGCPQGSV LGPTlwnvlm ddlLALPQGI EGTEMVAYad dvtvlvrgds raqlerraha vlglaeGWAS RNKLDFAPAK SRCIMLRGKF QRPPIVRYGS HVIRFEnqvt vlgvvFDDCL SFAPHAaaig eraSRCFGKM SRvsasawgl ryralrvlym gtyvttltya aavwylraav hvvrsvlLRT QRPSLtlltk ayrscstaaL PVLAGVLPAD LEVTRAGrrm receglarel aaerrrridg dvlvvwqnrW VSEGKGRELY KFFPDVADRK KATWMEPDYQ TSQILTghgi fnkrladmrL REGHACDCGA VEEDRDHVLW ECPLYDeirg rmLDGISRSE VGPVYHADLV RDeknfrllr efahtwhtaR TARESRGLPG DEECG
>Q5NTZ0_HOTLOOPS
1-22, 128-140, 175-252, 262-272, 292-346, 360-372, 378-404, 437-446, 459-468, 497-507, 514-525, 550-563, 607-614, 702-713, 849-873, 881-912, 925-938, 960-968, 1014-1035
MDIRPRLRIG QINLGGAEDA TRelpsiard lgldivlvqe qysmvgflaq cgahpkagvy irnrvlpcav lhhlssthit vvhiggwdly mvsayfqysd pidpylhrlg nildrlrgar vvicadtNAH SPLWHSLPRH yvgrgqevad rrakmedfig arrlvvhnad ghlpTFSTAN GESYVDVTLS TRGVRVSEWR VTNESSSDHR LIVFGVGGGT TGERDEDEEA RSDLRPGEPC ALRRYRDRGV DWdlfrsrih eRMGSLDLEE PVaalcekft gvitrtaeec lGSLKADRTD RGYEWWTPVL DKLRVAQGRA RRRWQKARRT GGEEEEQSGR VFRDRRreyr ramhdaetaF YREIAEGGNR DPwglayRTA SGRRRAPTNV VNGVEYAGRC SDDVsgamrt lmwalcpddy msrdtpyhar vrimaaLPPS GRDADPlskd slraiigsLK NTAPGIDGlt ariikkalpa aeaefvavya rcvvegTFPP VWKDGRLlvl pkgNGRPLTD PKAYRpvtll pvlgkilekv llqcapgltH SISPRQHGFS PGRstvtalr tlldvsrase qryvmaifld isgafdnaww pmimvkAKRN CPPNiyrmlt dyfrgrriav vagecaewkv stmgcpqgsv lgptlwnvlm ddllalpqgi egtemvayad dvtvlvrgds raqlerraha vLGLAEGWAS RNKldfapak srcimlrgkf qrppivrygs hvirfenqvt vlgvvfddcl sfaphaaaig erasrcfgkm srvsasawgl ryralrvlym gtyvttltya aavwylraav hvvrsvllrt qrpsltlltk ayrscstaAL PVLAGVLPAD LEVTRAGRRM RECeglarel AAERRRRIDG DVLVVWQNRW VSEGKGRELY KFfpdvadrk katwMEPDYQ TSQILTGHgi fnkrladmrl reghacdcgA VEEDRDHVlw ecplydeirg rmldgisrse vgpvyhadlv rdeknfrllr efaHTWHTAR TARESRGLPG DEECG
>Q5NTZ0_REM465
221-234, 317-341, 1021-1035
mdirprlrig qinlggaeda trelpsiard lgldivlvqe qysmvgflaq cgahpkagvy irnrvlpcav lhhlssthit vvhiggwdly mvsayfqysd pidpylhrlg nildrlrgar vvicadtnah splwhslprh yvgrgqevad rrakmedfig arrlvvhnad ghlptfstan gesyvdvtls trgvrvsewr vtnesssdhr livfgvgggt TGERDEDEEA RSDLrpgepc alrryrdrgv dwdlfrsrih ermgsldlee pvaalcekft gvitrtaeec lgslkadrtd rgyewwtpvl dklrvaQGRA RRRWQKARRT GGEEEEQSGR Vfrdrrreyr ramhdaetaf yreiaeggnr dpwglayrta sgrrraptnv vngveyagrc sddvsgamrt lmwalcpddy msrdtpyhar vrimaalpps grdadplskd slraiigslk ntapgidglt ariikkalpa aeaefvavya rcvvegtfpp vwkdgrllvl pkgngrpltd pkayrpvtll pvlgkilekv llqcapglth sisprqhgfs pgrstvtalr tlldvsrase qryvmaifld isgafdnaww pmimvkakrn cppniyrmlt dyfrgrriav vagecaewkv stmgcpqgsv lgptlwnvlm ddllalpqgi egtemvayad dvtvlvrgds raqlerraha vlglaegwas rnkldfapak srcimlrgkf qrppivrygs hvirfenqvt vlgvvfddcl sfaphaaaig erasrcfgkm srvsasawgl ryralrvlym gtyvttltya aavwylraav hvvrsvllrt qrpsltlltk ayrscstaal pvlagvlpad levtragrrm receglarel aaerrrridg dvlvvwqnrw vsegkgrely kffpdvadrk katwmepdyq tsqiltghgi fnkrladmrl reghacdcga veedrdhvlw ecplydeirg rmldgisrse vgpvyhadlv rdeknfrllr efahtwhtar TARESRGLPG DEECG
| JOB-ID | Q5NTZ0_150311ZumaL38AAQEAADCSPOwAAAAG |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q5NTZ0 |
| Description | tr|Q5NTZ0|Q5NTZ0_BOMMO Non-LTR retrotransposon R1Bmks ORF2 protein OS=Bombyx mori OX=7091 PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 1035 |
| Download predictions | smoothed scores raw scores |