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>Q5QGH9_LOOPS
1-81, 99-128, 133-169, 180-193, 205-236, 251-277, 288-366, 375-388, 397-404, 418-461, 475-483, 521-556, 589-601, 614-628, 636-668, 693-704, 712-720, 742-753, 768-777, 808-829, 848-860, 871-888, 902-914, 950-963, 999-1011, 1021-1028, 1035-1059
VLELWERGTL CKAMQSPKKT GMLEMWKNGP CYGQMPRQTG GFFRPWSMGK EAPQFPHGSS ASGADANCSP RGPSCGSAKE Lhavgqaaer kaerkqreAL QGGDRGFAAP QFSLWRRPVV TAHIEGQPve vlLDTGADDS IVTGIELGPH YTPKIVGGIG GFINTKEYKn veievlgkrI KGTIMTGDTP INIfgrnllt algmSLNFPI AKVEPVKVAL KPGKDGPKLK QWPLSKekiv alreicekme KDGQLEEAPP TNPYNTPTFA IKKKDKNkwr mlidfreLNR VTQDFTEVQL GIPHPAGLAK RKRITVLDIG DAYFSIPLDE EFRQYTAFTL PSVNNAEPGK RYIYKVLPQG WKGSPAifqy tmrhVLEPFR KANPDVTLvq ymddilIASD RTDLehdrvv lqkellnSIG FSTPEEKFQK DPPFQWMGYE LWPTKWKLQK IELPQRETWT Vndiqklvgv lnwaAQIYPG IKTkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe QEGCYYQEGK PLEATVIKSQ DNQWSYKIHQ EDKILKvgkf akiknthtng vrllahviqk igkeaiviWG QVPKFHLPVE Kdvweqwwtd ywqVTWIPEW DFISTPPLvr lvfnlVKDPI EGEETYYTDG SCNKQSKEGK AGYITDRGkd kvkvleqttn qqaeleaflm alTDSGPKAN IIVDsqyvmg iITGCPTESE srlvnqiiee mikkseiyva wVPAHKGIGG NQEidhlvsq girqvlfLEK IEPAQEEhdk yhsnvkelvf kfglprivar qivdtcdKCH QKGEAIHGQA NSDLGTWQMd cthlegkiii vavhvasGFI EAEVIPQETG rqtalfllkl AGRWPITHLH TDNGANFAsq evkmvawwag iEHTFGVPYN PQSQgvveam nhhlknqidr ireqansvet ivlmavhcmN FKRRGGIGDM TPAerlinmi tteqeiqfqq sknskfknfr vyyregrdQL WKGPGELLWK Gegavilkvg TDIKVVPRrk akiiKDYGGG KEVDSSSHME DTGEAREVA
>Q5QGH9_HOTLOOPS
1-22, 97-111, 145-155, 179-190, 215-237, 251-277, 290-314, 339-349, 417-434, 645-669, 977-987, 1018-1059
VLELWERGTL CKAMQSPKKT GMlemwkngp cygqmprqtg gffrpwsmgk eapqfphgss asgadancsp rgpscgsake lhavgqaaer kaerkqREAL QGGDRGFAAP Qfslwrrpvv tahiegqpve vlldtgadds ivtgIELGPH YTPKIvggig gfintkeykn veievlgkRI KGTIMTGDTP inifgrnllt algmslnfpi akvePVKVAL KPGKDGPKLK QWPLSKEkiv alreicekme KDGQLEEAPP TNPYNTPTFA IKKKDKNkwr mlidfrelnR VTQDFTEVQL GIPHPAGLAK RKRItvldig dayfsiplde efrqytafTL PSVNNAEPGk ryiykvlpqg wkgspaifqy tmrhvlepfr kanpdvtlvq ymddiliasd rtdlehdrvv lqkellNSIG FSTPEEKFQK DPPFqwmgye lwptkwklqk ielpqretwt vndiqklvgv lnwaaqiypg iktkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe qegcyyqegk pleatviksq dnqwsykihq edkilkvgkf akiknthtng vrllahviqk igkeaiviwg qvpkfhlpve kdvweqwwtd ywqvtwipew dfistpplvr lvfnlvkdpi egeeTYYTDG SCNKQSKEGK AGYITDRGKd kvkvleqttn qqaeleaflm altdsgpkan iivdsqyvmg iitgcptese srlvnqiiee mikkseiyva wvpahkgigg nqeidhlvsq girqvlflek iepaqeehdk yhsnvkelvf kfglprivar qivdtcdkch qkgeaihgqa nsdlgtwqmd cthlegkiii vavhvasgfi eaevipqetg rqtalfllkl agrwpithlh tdnganfasq evkmvawwag iehtfgvpyn pqsqgvveam nhhlknqidr ireqansvet ivlmavhcmn fkrrggigdm tpaerlinmi tteqeiQFQQ SKNSKFKnfr vyyregrdql wkgpgellwk gegavilKVG TDIKVVPRRK AKIIKDYGGG KEVDSSSHME DTGEAREVA
>Q5QGH9_REM465
55-101, 1037-1059
vlelwergtl ckamqspkkt gmlemwkngp cygqmprqtg gffrpwsmgk eapqFPHGSS ASGADANCSP RGPSCGSAKE LHAVGQAAER KAERKQREAL Qggdrgfaap qfslwrrpvv tahiegqpve vlldtgadds ivtgielgph ytpkivggig gfintkeykn veievlgkri kgtimtgdtp inifgrnllt algmslnfpi akvepvkval kpgkdgpklk qwplskekiv alreicekme kdgqleeapp tnpyntptfa ikkkdknkwr mlidfrelnr vtqdftevql giphpaglak rkritvldig dayfsiplde efrqytaftl psvnnaepgk ryiykvlpqg wkgspaifqy tmrhvlepfr kanpdvtlvq ymddiliasd rtdlehdrvv lqkellnsig fstpeekfqk dppfqwmgye lwptkwklqk ielpqretwt vndiqklvgv lnwaaqiypg iktkhlcrli rgkmtlteev qwtemaeaey eenkiilsqe qegcyyqegk pleatviksq dnqwsykihq edkilkvgkf akiknthtng vrllahviqk igkeaiviwg qvpkfhlpve kdvweqwwtd ywqvtwipew dfistpplvr lvfnlvkdpi egeetyytdg scnkqskegk agyitdrgkd kvkvleqttn qqaeleaflm altdsgpkan iivdsqyvmg iitgcptese srlvnqiiee mikkseiyva wvpahkgigg nqeidhlvsq girqvlflek iepaqeehdk yhsnvkelvf kfglprivar qivdtcdkch qkgeaihgqa nsdlgtwqmd cthlegkiii vavhvasgfi eaevipqetg rqtalfllkl agrwpithlh tdnganfasq evkmvawwag iehtfgvpyn pqsqgvveam nhhlknqidr ireqansvet ivlmavhcmn fkrrggigdm tpaerlinmi tteqeiqfqq sknskfknfr vyyregrdql wkgpgellwk gegavilkvg tdikvvprrk akiikdYGGG KEVDSSSHME DTGEAREVA
| JOB-ID | Q5QGH9_142035Zt8EM38AAQEAABRfIPMAAABC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q5QGH9 |
| Description | tr|Q5QGH9|Q5QGH9_SIV Pol protein (Fragment) OS=Simian immunodeficiency virus OX=11723 GN=pol PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1059 |
| Download predictions | smoothed scores raw scores |