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>Q5S532_LOOPS
1-16, 43-97, 107-146, 177-224, 229-269, 293-320, 356-411, 424-472, 483-496, 519-528, 582-629, 699-734, 777-795
MRARGYQRNC PPTWWTwgim llgmlticsa arnlwvtvyy ggACIGLSFC DQMYSIQQRP IIFGLHMPVY PRTPAHKKYN WKMWPKTLIC GKITWETrcm riesvyGIKA LKPCVKLTPL CVTLNCSNNI TTLNSTGNAT LNSTRNatve selemkncsf nittvvrdkk mqvhalFYRP DIVSINNDNT SYRLINCNTS SITQACPKVS FEPIPIHYCA PAGFailkCR DKKFNGTGLC TNISTEQCTH GIKPVVTTQL LLNGSLAEEe iiirsenltn nakniivqfn asVEINCTRP YRYIRQKTSI GQGQTLHTSK riigdirqah cnisgrkwhk tlqqvatklr nllnkTTIIF RPPPGGDPEI TTHSFNCGGE FFYCNTSRLF NNTWNGTHVN KTDTNGAVTL Pcrikqiinm wqgVGKAMYA PPIEGLIRCS SNITGLILTR DGGNSSSDNE TFRPGGGNMR DNwrselyky kvVQIEPIGV VPTRAKrrvv erekraiglg amflgflgAA GSTMGESLtl tvqarqvlsg ivqqqsnllr aieaqqhllq ltvwgiiqlq arilaveryl kDQRLLDLWG CSGKHICTTT VPWNSSWSNK SRCDLHTMTW MRGKKIHNYt dyytaycssq iqqekndkel leldkwaslw nwftitnwlw yirifimivg gliglcivfs vlsvlhrvRQ GYSPLSFQTL LPAPRGPDRP EGTEEEGGER GRDKsihlan glaaliwddl rnlclfsyhr srdllfiaar ivdllgRRGW ESSICGSSCS IGVRNdeiel ltcliqyqyl qlrgqirlqk yykelaeltv ptrirqgler lll
>Q5S532_HOTLOOPS
1-14, 75-85, 132-142, 179-188, 244-254, 274-282, 305-320, 359-368, 448-472, 482-499, 598-611, 704-735, 825-843
MRARGYQRNC PPTWwtwgim llgmlticsa arnlwvtvyy ggaciglsfc dqmysiqqrp iifglhmpvy prtpAHKKYN WKMWPktlic gkitwetrcm riesvygika lkpcvkltpl cvtlncsnni tTLNSTGNAT LNstrnatve selemkncsf nittvvrdkk mqvhalfyRP DIVSINNDnt syrlincnts sitqacpkvs fepipihyca pagfailkcr dkkfngtglc tniSTEQCTH GIKPvvttql llngslaeee iiiRSENLTN NAkniivqfn asveinctrp yryiRQKTSI GQGQTLHTSK riigdirqah cnisgrkwhk tlqqvatklr nllnkttiIF RPPPGGDPei tthsfncgge ffycntsrlf nntwngthvn ktdtngavtl pcrikqiinm wqgvgkamya ppieglircs snitgliLTR DGGNSSSDNE TFRPGGGNMR DNwrselyky kVVQIEPIGV VPTRAKRRVv erekraiglg amflgflgaa gstmgesltl tvqarqvlsg ivqqqsnllr aieaqqhllq ltvwgiiqlq arilaveryl kdqrlldlwg csgkhicTTT VPWNSSWSNK Srcdlhtmtw mrgkkihnyt dyytaycssq iqqekndkel leldkwaslw nwftitnwlw yirifimivg gliglcivfs vlsvlhrvrq gysPLSFQTL LPAPRGPDRP EGTEEEGGER GRDKSihlan glaaliwddl rnlclfsyhr srdllfiaar ivdllgrrgw essicgsscs igvrndeiel ltcliqyqyl qlrgqirlqk yykeLAELTV PTRIRQGLER LLL
>Q5S532_REM465
1-8, 452-463, 716-732
MRARGYQRnc pptwwtwgim llgmlticsa arnlwvtvyy ggaciglsfc dqmysiqqrp iifglhmpvy prtpahkkyn wkmwpktlic gkitwetrcm riesvygika lkpcvkltpl cvtlncsnni ttlnstgnat lnstrnatve selemkncsf nittvvrdkk mqvhalfyrp divsinndnt syrlincnts sitqacpkvs fepipihyca pagfailkcr dkkfngtglc tnisteqcth gikpvvttql llngslaeee iiirsenltn nakniivqfn asveinctrp yryirqktsi gqgqtlhtsk riigdirqah cnisgrkwhk tlqqvatklr nllnkttiif rpppggdpei tthsfncgge ffycntsrlf nntwngthvn ktdtngavtl pcrikqiinm wqgvgkamya ppieglircs snitgliltr dGGNSSSDNE TFRpgggnmr dnwrselyky kvvqiepigv vptrakrrvv erekraiglg amflgflgaa gstmgesltl tvqarqvlsg ivqqqsnllr aieaqqhllq ltvwgiiqlq arilaveryl kdqrlldlwg csgkhicttt vpwnsswsnk srcdlhtmtw mrgkkihnyt dyytaycssq iqqekndkel leldkwaslw nwftitnwlw yirifimivg gliglcivfs vlsvlhrvrq gysplsfqtl lpaprGPDRP EGTEEEGGER GRdksihlan glaaliwddl rnlclfsyhr srdllfiaar ivdllgrrgw essicgsscs igvrndeiel ltcliqyqyl qlrgqirlqk yykelaeltv ptrirqgler lll
| JOB-ID | Q5S532_053159ZukUT38AAQEAADCSIWMAAAAY |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q5S532 |
| Description | tr|Q5S532|Q5S532_9HIV1 Envelope glycoprotein gp160 OS=Human immunodeficiency virus 1 OX=11676 GN=env PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 843 |
| Download predictions | smoothed scores raw scores |