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>Q5XXP3_LOOPS
1-37, 53-103, 129-147, 156-221, 253-262, 271-306, 316-356, 363-370, 380-485, 492-515, 524-678, 715-734, 784-791, 814-835, 843-922, 952-1049, 1056-1123, 1131-1139, 1147-1162, 1182-1210
MEFIPTQTFY NRRYQPRPWA PRPTIQVIRP RPRPQRQagq laqlisavnk ltMRAVPQQK PRRNRKNKKQ RQKKQAPQND PKQKKQPPQK KPAQKKKKPG RRErmcmkie ndcifevkhe gkvmgyacLV GDKVMKPAHV KGTIDNAdla klafkRSSKY DLECAQIPVH MKSDASKFTH EKPEGYYNWH HGAVQYSGGR FTIPTGAGKP GDSGRPIFDN Kgrvvaivlg ganegartal svvtwnkdiv tkITPEGAEE WSlalpvlcl LANTTFPCSQ PPCTPCCYEK EPESTLRMLE DNVMRPgyyq llkasLTCSP HRQRRSTKDN FNVYKATRPY LAHCPDCGEG HSCHSPiale riRNEATDGT lkiqvslqiG IKTDDSHDWT KLRYMDSHTP ADAERAGLLV RTSAPCTITG TMGHFILARC PKGETLTVGF TDSRKISHTC THPFHHEPPV IGRERFHSRP QHGKELPCST YVQSTaatae eIEVHMPPDT PDRTLMTQQS GNVKItvngq tvrYKCNCGG SNEGLTTTDK VINNCKIDQC HAAVTNHKNW QYNSPLVPRN AELGDRKGKI HIPFPLANVT CRVPKARNPT VTYGKNQVTM LLYPDHPTLL SYRNMGQEPN YHEEWVTHKK EVTLTVPTEG LEVTWGNNEP YKYWPQMSTN GTAHGHPHei ilyyyelypt mtvvivsvas fvllsmvgta vgmcVCARRR CITPYELTPG ATVPfllsll ccvrttkaat yyeaaaylwn eqqplfwlqa liplaalivl cncLKLLPCC Cktlaflavm sigahtvsay ehvTVIPNTV GVPYKTLVNR PGYSPmvlem elQSVTLEPT LSLDYITCEY KTVIPSPYVK CCGTAECKDK SLPDYSCKVF TGVYPFMWGG AYCFCDAENT QLSEAHVEKS EScktefasa yrahtasasa klrvlyqgnn iTVAAYANGD HAVTVKDAKF VVGPMSSAWT PFDNKIVVYK GDVYNMDYPP FGAGRPGQFG DIQSRTPESK DVYANTQLVL QRPAAGTVHV PYSQAPSGFk ywlkeRGASL QHTAPFGCQI ATNPVRAVNC AVGNIPISID IPDAAFTRVV DAPSVTDMSC EVPACTHSSD FGGvaiikyt ASKKGKCAVh smtnavTIRE ADVEVEGNSQ LQisfstala saefrvqvcs tQVHCAAACH PPKDHIVNYP ASHTTLGVQD isttamswvq kitggvgliv avaalilivv lcvsfsrh
>Q5XXP3_HOTLOOPS
1-35, 51-104, 232-246, 316-333, 379-388, 555-565, 582-609, 875-886, 973-983, 1130-1138
MEFIPTQTFY NRRYQPRPWA PRPTIQVIRP RPRPQrqagq laqlisavnk LTMRAVPQQK PRRNRKNKKQ RQKKQAPQND PKQKKQPPQK KPAQKKKKPG RRERmcmkie ndcifevkhe gkvmgyaclv gdkvmkpahv kgtidnadla klafkrssky dlecaqipvh mksdaskfth ekpegyynwh hgavqysggr ftiptgagkp gdsgrpifdn kgrvvaivlg gANEGARTAL SVVTWNkdiv tkitpegaee wslalpvlcl lanttfpcsq ppctpccyek epestlrmle dnvmrpgyyq llkasLTCSP HRQRRSTKDN FNVykatrpy lahcpdcgeg hschspiale rirneatdgt lkiqvslqIG IKTDDSHDwt klrymdshtp adaeragllv rtsapctitg tmghfilarc pkgetltvgf tdsrkishtc thpfhheppv igrerfhsrp qhgkelpcst yvqstaatae eievhmppdt pdrtlmtqqs gnvkitvngq tvrykcncgg snegltttdk vinnckidqc haavTNHKNW QYNSPlvprn aelgdrkgki hIPFPLANVT CRVPKARNPT VTYGKNQVTm llypdhptll syrnmgqepn yheewvthkk evtltvpteg levtwgnnep ykywpqmstn gtahghphei ilyyyelypt mtvvivsvas fvllsmvgta vgmcvcarrr citpyeltpg atvpfllsll ccvrttkaat yyeaaaylwn eqqplfwlqa liplaalivl cnclkllpcc cktlaflavm sigahtvsay ehvtvipntv gvpyktlvnr pgyspmvlem elqsvtlept lsldyitcey ktvipspyvk ccgtAECKDK SLPDYSckvf tgvypfmwgg aycfcdaent qlseahveks escktefasa yrahtasasa klrvlyqgnn itvaayangd havtvkdakf vvGPMSSAWT PFDnkivvyk gdvynmdypp fgagrpgqfg diqsrtpesk dvyantqlvl qrpaagtvhv pysqapsgfk ywlkergasl qhtapfgcqi atnpvravnc avgnipisid ipdaaftrvv dapsvtdmsc evpacthssd fggvaiikyT ASKKGKCAvh smtnavtire advevegnsq lqisfstala saefrvqvcs tqvhcaaach ppkdhivnyp ashttlgvqd isttamswvq kitggvgliv avaalilivv lcvsfsrh
>Q5XXP3_REM465
32-40, 56-102, 914-927
mefiptqtfy nrryqprpwa prptiqvirp rPRPQRQAGQ laqlisavnk ltmraVPQQK PRRNRKNKKQ RQKKQAPQND PKQKKQPPQK KPAQKKKKPG RRermcmkie ndcifevkhe gkvmgyaclv gdkvmkpahv kgtidnadla klafkrssky dlecaqipvh mksdaskfth ekpegyynwh hgavqysggr ftiptgagkp gdsgrpifdn kgrvvaivlg ganegartal svvtwnkdiv tkitpegaee wslalpvlcl lanttfpcsq ppctpccyek epestlrmle dnvmrpgyyq llkasltcsp hrqrrstkdn fnvykatrpy lahcpdcgeg hschspiale rirneatdgt lkiqvslqig iktddshdwt klrymdshtp adaeragllv rtsapctitg tmghfilarc pkgetltvgf tdsrkishtc thpfhheppv igrerfhsrp qhgkelpcst yvqstaatae eievhmppdt pdrtlmtqqs gnvkitvngq tvrykcncgg snegltttdk vinnckidqc haavtnhknw qynsplvprn aelgdrkgki hipfplanvt crvpkarnpt vtygknqvtm llypdhptll syrnmgqepn yheewvthkk evtltvpteg levtwgnnep ykywpqmstn gtahghphei ilyyyelypt mtvvivsvas fvllsmvgta vgmcvcarrr citpyeltpg atvpfllsll ccvrttkaat yyeaaaylwn eqqplfwlqa liplaalivl cnclkllpcc cktlaflavm sigahtvsay ehvtvipntv gvpyktlvnr pgyspmvlem elqsvtlept lsldyitcey ktvipspyvk ccgtaeckdk slpdysckvf tgvypfmwgg aycfcdaent qlsEAHVEKS ESCKTEFasa yrahtasasa klrvlyqgnn itvaayangd havtvkdakf vvgpmssawt pfdnkivvyk gdvynmdypp fgagrpgqfg diqsrtpesk dvyantqlvl qrpaagtvhv pysqapsgfk ywlkergasl qhtapfgcqi atnpvravnc avgnipisid ipdaaftrvv dapsvtdmsc evpacthssd fggvaiikyt askkgkcavh smtnavtire advevegnsq lqisfstala saefrvqvcs tqvhcaaach ppkdhivnyp ashttlgvqd isttamswvq kitggvgliv avaalilivv lcvsfsrh
| JOB-ID | Q5XXP3_181459Zwq8o38AAQEAAGAGWOMAAAAM |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q5XXP3 |
| Description | sp|Q5XXP3|POLS_CHIK3 Structural polyprotein OS=Chikungunya virus (strain 37997) OX=371095 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1248 |
| Download predictions | smoothed scores raw scores |