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>Q66282_LOOPS
1-56, 63-95, 105-191, 196-235, 244-312, 320-427, 462-478, 489-539, 556-573, 585-633, 650-662, 691-703, 710-780, 790-840, 849-865, 896-946, 952-969, 976-986, 1075-1084, 1094-1105, 1150-1157, 1163-1175, 1216-1237, 1251-1268, 1277-1288, 1294-1336, 1355-1398, 1415-1451, 1470-1480, 1516-1541, 1555-1567, 1573-1609, 1646-1691, 1698-1708, 1731-1775, 1809-1845, 1869-1878, 1918-1948, 1954-1965, 1979-2017, 2038-2062, 2071-2093, 2103-2135, 2161-2173
MGAQVSTQKT GAHETGLNAS GNSIIHYTNI NYYKDAASNS ANRQDFTQDP SKFTEPvkdi miKSLPALNS PTVEECGYSD RVRSITLGNS TITTQecanv vvgyGVWPDY LKDSEATAED QPTQPDVATC RFYTLDSVQW QKTSPGWWWK LPDALSNLGL FGQNMQYHYL GRTGYTIHVQ CNASKFHQGC LlvvcVPEAE MGCATLNNTP SSAELLGGDS AKEFADKPVA SGSNKlvqrv vynAGMGVGV GNLTIFPHQW INLRTNNSAT IVMPYTNSVP MDNMFRHNNV TLMVIPFVPL DYCPGSTTYV PItitiapmC AEYNGLRLAG HQGLPTMNTP GSCQFLTSDD FQSPSAMPQY DVTPEMRIPG EVKNLMEIAE VDSVVPVQNV GEKVNSMEAY QIPVRSNEGS GTQVFGFPLQ PGYSSVFsrt llgeilnyyt hwsgsikltf mfcgsamatg kFLLAYSPPG AGAPTKRVda mlgthvvwDV GLQSSCVLCI PWISQTHYRY VASDEYTAGG FITCWYQTNI VVPADAQSSc yimcfvsacn dfsvrLLKDT PFISQQNFFQ GPVedaitaa igrvADTVGT GPTNSEAIPA LTAAETGHTS QVVPSDTMQT RHVKNYHSRS ESTienflcr sacvyfteyE NSGAKRYAEW VItprqaaql rrklefftyv rfdleltfvi TSTQQPSTTQ NQDaqilthQ IMYVPPGGPV PDKVDSYVWQ TSTNPSVFWT EGNAPPRMSV PFLSIGNAYS NFYDGWSEFS RNGVYGINTL nnmgtlyarH VNAGSTGPIK STIRIYFKPK HVKAWIPRPP RLCQYEKAKN VNFQPSGVTT trqsittmTN TGAFGQQSGA VYVGNyrvvn rhlatsadwq ncvwenynrd llvstTTAHG CDIIARCRCT TGVYFCASKN KHYPISFEGP GIVEVQESEY YPRRYQshvl lAAGFSEPGD CGGILRCEHg vigivTMGGE GVVGFAdird llwleddame qgvkdyveql gnafgsgftn qiceqvnllk eslvgqdsil ekslkalvki isalvivvrn hddlitvtat laliGCTSSP WRWLkqkvsq yygIPMAERQ NNGWLkkfte mtnackgmew iaikiqkfie wlkvkilpev rekheflnrL KQLPLLEsqi atIEQSAPSQ SDQEQlfsnv qyfahycrky aplyaseakr vfslekkmsn yiqfkSKCRI EPVCLLLHGS PGAGKSVatn ligrslaekl NSSVYSLPPD PDHFDGYKqq avvimdDLCQ KPDGKDVSlf cqmVSSVDFV PPMAALEEKG ILFTSPFVLA STNAGSINAP TVSDSRalar rfhfdmniev ismySQNGKI NMPMSVKTCD EECCPVNFKK CCPLVCGKAI QFIDRRTQvr ysldmlvtem freyNHRHSV GATLEALFQG PPVYREIKIS VAPETPPPPR Iadllksvds eavreyckeK GWLVPEVNST lqiekhvsra ficlqaittf vsvagiiyii yklfaGFQGA YTGIPNQKPK VPTLRQAKVQ Gpafefavam mkrnSSTVKT EYGEFTMlgi ydRWAVLPRH AKPGPTILMN DQEVGVLDAK ELVDKDGTNl eltllklnrn ekfrdirgfl akeevevnea vlainTSKFP NMYIPVGQVT DYGFLNLGGT PTKRMLMYNF PTRAGQCGGV LmstgkvLGI HVGGNGHQgf saallkhyfn deqgeiefie SSKEAGFPII NTPSKTKLEP SVFHQVFEGD KEPAVLRNGD PRLKVnfeea ifskyignvn thvdeymmea vdhyagqlAT LDISTEPMKL EDAVYGTEGL EALDLTTSAG YPYVAlgikk rdilskktrd ltklkecmDK YGLNLPMVty vkdelrsaek vakgksrlie asslndsvam rqtfgnlYKT FHLNPGVVTG SAVGCDPDLF WSKIPVMLdg hliAFDYSGY DASLSpvwfa clklllekLG YSHKETNYID YLCNSHHLYR DKHYFVRGGM PSGCSGTsif nsminniiir tlmlkvyKGI DLDQFRMIAY GDDVIASYPW PIdasllaea GKDYGLIMTP ADKGECFNEV TWTnvtflkr yfRADEQYPF LVHPVMPMKD IHESIRWTKD PKNTQdhvrs lcllawhnge heyeefirki RSVPVGRCLT LPAfstirrk wldsf
>Q66282_HOTLOOPS
1-22, 64-73, 88-98, 115-126, 225-235, 602-621, 626-636, 691-699, 827-838, 851-859, 921-931, 1075-1082, 1096-1105, 1323-1334, 1390-1399, 1441-1450, 1469-1477, 1601-1623, 1757-1771, 1844-1877, 1891-1908, 2159-2185
MGAQVSTQKT GAHETGLNAS GNsiihytni nyykdaasns anrqdftqdp skftepvkdi mikSLPALNS PTVeecgysd rvrsitlGNS TITTQECAnv vvgygvwpdy lkdsEATAED QPTQPDvatc rfytldsvqw qktspgwwwk lpdalsnlgl fgqnmqyhyl grtgytihvq cnaskfhqgc llvvcvpeae mgcatlnntp ssaellggds akefADKPVA SGSNKlvqrv vynagmgvgv gnltifphqw inlrtnnsat ivmpytnsvp mdnmfrhnnv tlmvipfvpl dycpgsttyv pititiapmc aeynglrlag hqglptmntp gscqfltsdd fqspsampqy dvtpemripg evknlmeiae vdsvvpvqnv gekvnsmeay qipvrsnegs gtqvfgfplq pgyssvfsrt llgeilnyyt hwsgsikltf mfcgsamatg kfllaysppg agaptkrvda mlgthvvwdv glqsscvlci pwisqthyry vasdeytagg fitcwyqtni vvpadaqssc yimcfvsacn dfsvrllkdt pfisqqnffq gpvedaitaa igrvadtvgt gptnseaipa lTAAETGHTS QVVPSDTMQT RhvknYHSRS ESTIENflcr sacvyfteye nsgakryaew vitprqaaql rrklefftyv rfdleltfvi TSTQQPSTTq nqdaqilthq imyvppggpv pdkvdsyvwq tstnpsvfwt egnapprmsv pflsignays nfydgwsefs rngvygintl nnmgtlyarh vnagstgpik stiriyfkpk hvkawiprpp rlcqyeKAKN VNFQPSGVtt trqsittmtn TGAFGQQSGa vyvgnyrvvn rhlatsadwq ncvwenynrd llvstttahg cdiiarcrct tgvyfcaskn KHYPISFEGP Givevqesey yprryqshvl laagfsepgd cggilrcehg vigivtmgge gvvgfadird llwleddame qgvkdyveql gnafgsgftn qiceqvnllk eslvgqdsil ekslkalvki isalvivvrn hddlitvtat laliGCTSSP WRwlkqkvsq yygipMAERQ NNGWLkkfte mtnackgmew iaikiqkfie wlkvkilpev rekheflnrl kqlpllesqi atieqsapsq sdqeqlfsnv qyfahycrky aplyaseakr vfslekkmsn yiqfkskcri epvclllhgs pgagksvatn ligrslaekl nssvyslppd pdhfdgykqq avvimddlcq kpdgkdvslf cqmvssvdfv ppmaaleekg ilftspfvla stNAGSINAP TVSDsralar rfhfdmniev ismysqngki nmpmsvktcd eeccpvnfkk ccplvcgkaI QFIDRRTQVr ysldmlvtem freynhrhsv gatlealfqg ppvyreikis VAPETPPPPR iadllksvds eavreyckEK GWLVPEVnst lqiekhvsra ficlqaittf vsvagiiyii yklfagfqga ytgipnqkpk vptlrqakvq gpafefavam mkrnsstvkt eygeftmlgi ydrwavlprh akpgptilmn dqevgvldak ELVDKDGTNL ELTLLKLNRN EKFrdirgfl akeevevnea vlaintskfp nmyipvgqvt dygflnlggt ptkrmlmynf ptragqcggv lmstgkvlgi hvggnghqgf saallkhyfn deqgeiefie sskeagfpii ntpsktklep svfhqvFEGD KEPAVLRNGD Prlkvnfeea ifskyignvn thvdeymmea vdhyagqlat ldistepmkl edavygtegl ealdlttsag ypyVALGIKK RDILSKKTRD LTKLKECMDK YGLNLPMvty vkdelrsaek VAKGKSRLIE ASSLNDSVam rqtfgnlykt fhlnpgvvtg savgcdpdlf wskipvmldg hliafdysgy daslspvwfa clkllleklg yshketnyid ylcnshhlyr dkhyfvrggm psgcsgtsif nsminniiir tlmlkvykgi dldqfrmiay gddviasypw pidasllaea gkdyglimtp adkgecfnev twtnvtflkr yfradeqypf lvhpvmpmkd ihesirwtkd pkntqdhvrs lcllawhnge heyeefirKI RSVPVGRCLT LPAFSTIRRK WLDSF
>Q66282_REM465
1-13, 116-123, 694-702, 1164-1173
MGAQVSTQKT GAHetglnas gnsiihytni nyykdaasns anrqdftqdp skftepvkdi mikslpalns ptveecgysd rvrsitlgns tittqecanv vvgygvwpdy lkdseATAED QPTqpdvatc rfytldsvqw qktspgwwwk lpdalsnlgl fgqnmqyhyl grtgytihvq cnaskfhqgc llvvcvpeae mgcatlnntp ssaellggds akefadkpva sgsnklvqrv vynagmgvgv gnltifphqw inlrtnnsat ivmpytnsvp mdnmfrhnnv tlmvipfvpl dycpgsttyv pititiapmc aeynglrlag hqglptmntp gscqfltsdd fqspsampqy dvtpemripg evknlmeiae vdsvvpvqnv gekvnsmeay qipvrsnegs gtqvfgfplq pgyssvfsrt llgeilnyyt hwsgsikltf mfcgsamatg kfllaysppg agaptkrvda mlgthvvwdv glqsscvlci pwisqthyry vasdeytagg fitcwyqtni vvpadaqssc yimcfvsacn dfsvrllkdt pfisqqnffq gpvedaitaa igrvadtvgt gptnseaipa ltaaetghts qvvpsdtmqt rhvknyhsrs estienflcr sacvyfteye nsgakryaew vitprqaaql rrklefftyv rfdleltfvi tstQQPSTTQ NQdaqilthq imyvppggpv pdkvdsyvwq tstnpsvfwt egnapprmsv pflsignays nfydgwsefs rngvygintl nnmgtlyarh vnagstgpik stiriyfkpk hvkawiprpp rlcqyekakn vnfqpsgvtt trqsittmtn tgafgqqsga vyvgnyrvvn rhlatsadwq ncvwenynrd llvstttahg cdiiarcrct tgvyfcaskn khypisfegp givevqesey yprryqshvl laagfsepgd cggilrcehg vigivtmgge gvvgfadird llwleddame qgvkdyveql gnafgsgftn qiceqvnllk eslvgqdsil ekslkalvki isalvivvrn hddlitvtat laligctssp wrwlkqkvsq yygipmaerq nngwlkkfte mtnackgmew iaikiqkfie wlkvkilpev rekheflnrl kqlpllesqi atiEQSAPSQ SDQeqlfsnv qyfahycrky aplyaseakr vfslekkmsn yiqfkskcri epvclllhgs pgagksvatn ligrslaekl nssvyslppd pdhfdgykqq avvimddlcq kpdgkdvslf cqmvssvdfv ppmaaleekg ilftspfvla stnagsinap tvsdsralar rfhfdmniev ismysqngki nmpmsvktcd eeccpvnfkk ccplvcgkai qfidrrtqvr ysldmlvtem freynhrhsv gatlealfqg ppvyreikis vapetppppr iadllksvds eavreyckek gwlvpevnst lqiekhvsra ficlqaittf vsvagiiyii yklfagfqga ytgipnqkpk vptlrqakvq gpafefavam mkrnsstvkt eygeftmlgi ydrwavlprh akpgptilmn dqevgvldak elvdkdgtnl eltllklnrn ekfrdirgfl akeevevnea vlaintskfp nmyipvgqvt dygflnlggt ptkrmlmynf ptragqcggv lmstgkvlgi hvggnghqgf saallkhyfn deqgeiefie sskeagfpii ntpsktklep svfhqvfegd kepavlrngd prlkvnfeea ifskyignvn thvdeymmea vdhyagqlat ldistepmkl edavygtegl ealdlttsag ypyvalgikk rdilskktrd ltklkecmdk yglnlpmvty vkdelrsaek vakgksrlie asslndsvam rqtfgnlykt fhlnpgvvtg savgcdpdlf wskipvmldg hliafdysgy daslspvwfa clkllleklg yshketnyid ylcnshhlyr dkhyfvrggm psgcsgtsif nsminniiir tlmlkvykgi dldqfrmiay gddviasypw pidasllaea gkdyglimtp adkgecfnev twtnvtflkr yfradeqypf lvhpvmpmkd ihesirwtkd pkntqdhvrs lcllawhnge heyeefirki rsvpvgrclt lpafstirrk wldsf
| JOB-ID | Q66282_162301Zt8g5X8AAQEAABReB4QAAAAJ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q66282 |
| Description | sp|Q66282|POLG_CXB3W Genome polyprotein OS=Coxsackievirus B3 (strain Woodruff) OX=103904 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 2185 |
| Download predictions | smoothed scores raw scores |