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>Q66474_LOOPS
1-56, 63-98, 105-131, 154-191, 196-204, 212-233, 241-285, 296-310, 316-424, 461-478, 486-535, 553-566, 583-632, 647-659, 694-783, 788-871, 880-894, 901-952, 958-975, 982-1001, 1081-1090, 1156-1163, 1169-1181, 1222-1243, 1258-1274, 1283-1294, 1300-1342, 1361-1404, 1421-1455, 1475-1486, 1522-1547, 1561-1573, 1579-1616, 1652-1697, 1704-1714, 1736-1780, 1815-1851, 1875-1884, 1926-1954, 1960-1971, 1986-2023, 2044-2068, 2077-2099, 2109-2141, 2168-2179
MGAQVSTQKT GAHETGLSAS GNSIIHYTNI NYYKDAASNS ANRQDFTQDP GKFTEPvkdi maKTLPALNS PSAEECGYSD RVRSITLGNS TITTQESAnv vvgyGVWPDY LKDDEATAED QPTNPDVATC Rfytldsvsw mkesqgwwwk fpdALRDMGL FGQNMQYHYL GRSGYTIHVQ CNASKFHQGC LlvvcVPEAE MGAAtvneki nREHLSNGEV ANTFTGTKSS NTNgvqqavf NAGMGVRVGN LTVFPHQWIN LRTNNCATIV MPYINSVPMD NMFRHynftl miipfAKLDY AAGSSTYIPI tvtvaPMCAE YNGLRLAGHQ GLPVMSTPGS NQFLTSDDYQ SPTAMPQFDV TPEMHIPGEV KNLMEIAEVD SVVPVNNVNE NVNSLEAYRI PVHSVTETGA QVFGFTLQPG ADSVmertlh geilnyyanw sgsikltfmy cgsamatgkf LLAYSPPGAG VPKNRKEAml gthmiWDIGL QSRCVLCVPW ISQTHYRFVS KDSYTDAGFI TCWYQTSIVV PAEVQnqsvi lcfvsacndf svRLLRDSPF VTQTAFyqnd vqnaversiv rvADTLPSGP SNSESIPALT AAETGHTSQV VPSDTIQTRH VRNFHVRSES SVenflsrsa cvyiveYKTQ DTTPDKMYDs wvintrqvaq lrrkleffty vrfdvevtfv itsVQDDSTR QNTDTPVLTH QIMYVPPGGP IPHAVDDYNW QTSTNPSVFW TEGNAPPRMS IPFMSVGNAY SNFYDGWSHF SQTGVYGFNT LNNmgklYFR HVNDRTISPI TSKVRIYFKP KHVKAWVPRP PRLCEYTHKD NVDYEPKGVT TSRTSITITN SKHMETHGAF GQQSGAAYVG NyrvvnrhlA THTDWQNCVW EDYNrdllvs TTTAHGCDTI ARCHCTTGVY FCASRNKHHP VVFEGPGLVE VQESGYYPKR YQshvllAAG LSEPGDCGGI LRCEHgvigi vTMGGEGVVG FADVRDLLWL Eddameqgvk dyveqlgnaf gsgftnqice qvnllkesli gqdsileksl kalvkiisal vivvrnhddl itvtatlali GCTSSPWRWL kqkvsqyygi smaerqnngw lkkftemtna ckgmewiaik iqkfiewlkv kilpevrekh eflnrLKQLP LLEsqiatIE QSAPSQSDQE Qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kSKCRIEPVC LLLHGSPGVG KSVatnligr slaeklnSSI YSLPPDPDHF DGYKqqavvi mdDLCQNPDG KDVSlfcqmV SSVDFVPPMA ALEEKGILFT SPFVLASTNA GSINAPTVSD SRalarrfhf dmnievismy NQNGKINMPM SVKTCDEECC PVNFKKCCPL VCGKAIQFID RRTQvrysld mlvtemfrey NHRHSVGATL EALFQGPPVY REIKISVAPE IPPPPaiadl lksvdseavr dyckEKGWLV PEVNSTlqie khvsraficl qalttfvsva giiyiiyklf aGFQGAYTGM PNQKPKVPTL RQAKVQGpaf efavammkrn SSTVKTEYGE FTMlgiydRW AVLPRHAKPG PTILMNDQEV GVVDAKELVD KDGTNLeltl lklnrnekfr dirgflakee vevneavlai nTSKFPNMYI PVGQVTDYGF LNLGGTPTKR MLMYNFPTRA GQCGGVLmst gkvLGIHVGG NGHQgfsaal lkhyfndeqg eiefiESSKD AGYPVINTPS RTKLEPSVFH QVFEGSKEPA VLRNGDPRLK anfeeaifsk yignvnthvd eymleaidhy agqlATLDIS TEPMKLEDAV YGTEGLEALD LTTSAGYPYV Algikkrdil skktrdltkl kecmDKYGLN LPMVtyvkde lrsaekvakg ksrlieassl ndsvamrqtf gnlykAFHQN PGIVTGSAVG CDPDLFWSKI PVMLdghliA FDYSGYDASL Spvwfaclkl lleklGYTHK ETNYIDYLCN SHHLYRDKHY FVRGGMPSGC SGTsifnsmi nniiirtlml kvyKGIDLDQ FRMIAYGDDV IASYPWPIda sllaeaGKDY GLIMTPADKG ECFNEVTWTn vtflkryfRA DEQYPFLVHP VMPMKDIHES IRWTKDPKNT Qdhvrslcll awhngeqeye efiqkirSVP VGRCLTLPAf stlrrkwlds f
>Q66474_HOTLOOPS
1-23, 89-100, 115-127, 225-232, 603-619, 625-636, 649-659, 691-707, 794-842, 1080-1089, 1329-1340, 1396-1405, 1591-1600, 1607-1629, 1763-1775, 1850-1883, 1897-1913, 2166-2191
MGAQVSTQKT GAHETGLSAS GNSiihytni nyykdaasns anrqdftqdp gkftepvkdi maktlpalns psaeecgysd rvrsitlgNS TITTQESANV vvgygvwpdy lkddEATAED QPTNPDVatc rfytldsvsw mkesqgwwwk fpdalrdmgl fgqnmqyhyl grsgytihvq cnaskfhqgc llvvcvpeae mgaatvneki nrehlsngev antfTGTKSS NTngvqqavf nagmgvrvgn ltvfphqwin lrtnncativ mpyinsvpmd nmfrhynftl miipfakldy aagsstyipi tvtvapmcae ynglrlaghq glpvmstpgs nqfltsddyq sptampqfdv tpemhipgev knlmeiaevd svvpvnnvne nvnsleayri pvhsvtetga qvfgftlqpg adsvmertlh geilnyyanw sgsikltfmy cgsamatgkf llaysppgag vpknrkeaml gthmiwdigl qsrcvlcvpw isqthyrfvs kdsytdagfi tcwyqtsivv paevqnqsvi lcfvsacndf svrllrdspf vtqtafyqnd vqnaversiv rvadtlpsgp snsesipalt aaETGHTSQV VPSDTIQTRh vrnfHVRSES SVENFLsrsa cvyiveykTQ DTTPDKMYDs wvintrqvaq lrrkleffty vrfdvevtfv ITSVQDDSTR QNTDTPVlth qimyvppggp iphavddynw qtstnpsvfw tegnapprms ipfmsvgnay snfydgwshf sqtgvygfnt lnnmgklyfr hvnDRTISPI TSKVRIYFKP KHVKAWVPRP PRLCEYTHKD NVDYEPKGVT TSrtsititn skhmethgaf gqqsgaayvg nyrvvnrhla thtdwqncvw edynrdllvs tttahgcdti archcttgvy fcasrnkhhp vvfegpglve vqesgyypkr yqshvllaag lsepgdcggi lrcehgvigi vtmggegvvg fadvrdllwl eddameqgvk dyveqlgnaf gsgftnqice qvnllkesli gqdsileksl kalvkiisal vivvrnhddl itvtatlalI GCTSSPWRWl kqkvsqyygi smaerqnngw lkkftemtna ckgmewiaik iqkfiewlkv kilpevrekh eflnrlkqlp llesqiatie qsapsqsdqe qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kskcriepvc lllhgspgvg ksvatnligr slaeklnssi yslppdpdhf dgykqqavvi mddlcqnpdg kdvslfcqmv ssvdfvppma aleekgilft spfvlastNA GSINAPTVSD sralarrfhf dmnievismy nqngkinmpm svktcdeecc pvnfkkccpl vcgkaIQFID RRTQVrysld mlvtemfrey nhrhsvgatl ealfqgppvy reikisvape ippppaiadl lksvdseavr dyckekgwlv pevnstlqie khvsraficl qalttfvsva giiyiiyklf agfqgaytgm pnqkpkvptl rqakvqgpaf efavammkrn sstvkteyge ftmlgiydrw avlprhakpg PTILMNDQEV gvvdakELVD KDGTNLELTL LKLNRNEKFr dirgflakee vevneavlai ntskfpnmyi pvgqvtdygf lnlggtptkr mlmynfptra gqcggvlmst gkvlgihvgg nghqgfsaal lkhyfndeqg eiefiesskd agypvintps rtklepsvfh qvFEGSKEPA VLRNGdprlk anfeeaifsk yignvnthvd eymleaidhy agqlatldis tepmkledav ygtegleald lttsagypyV ALGIKKRDIL SKKTRDLTKL KECMDKYGLN LPMvtyvkde lrsaekVAKG KSRLIEASSL NDSvamrqtf gnlykafhqn pgivtgsavg cdpdlfwski pvmldghlia fdysgydasl spvwfaclkl lleklgythk etnyidylcn shhlyrdkhy fvrggmpsgc sgtsifnsmi nniiirtlml kvykgidldq frmiaygddv iasypwpida sllaeagkdy glimtpadkg ecfnevtwtn vtflkryfra deqypflvhp vmpmkdihes irwtkdpknt qdhvrslcll awhngeqeye efiqkIRSVP VGRCLTLPAF STLRRKWLDS F
>Q66474_REM465
1-15, 602-611, 1170-1179
MGAQVSTQKT GAHETglsas gnsiihytni nyykdaasns anrqdftqdp gkftepvkdi maktlpalns psaeecgysd rvrsitlgns tittqesanv vvgygvwpdy lkddeataed qptnpdvatc rfytldsvsw mkesqgwwwk fpdalrdmgl fgqnmqyhyl grsgytihvq cnaskfhqgc llvvcvpeae mgaatvneki nrehlsngev antftgtkss ntngvqqavf nagmgvrvgn ltvfphqwin lrtnncativ mpyinsvpmd nmfrhynftl miipfakldy aagsstyipi tvtvapmcae ynglrlaghq glpvmstpgs nqfltsddyq sptampqfdv tpemhipgev knlmeiaevd svvpvnnvne nvnsleayri pvhsvtetga qvfgftlqpg adsvmertlh geilnyyanw sgsikltfmy cgsamatgkf llaysppgag vpknrkeaml gthmiwdigl qsrcvlcvpw isqthyrfvs kdsytdagfi tcwyqtsivv paevqnqsvi lcfvsacndf svrllrdspf vtqtafyqnd vqnaversiv rvadtlpsgp snsesipalt aAETGHTSQV Vpsdtiqtrh vrnfhvrses svenflsrsa cvyiveyktq dttpdkmyds wvintrqvaq lrrkleffty vrfdvevtfv itsvqddstr qntdtpvlth qimyvppggp iphavddynw qtstnpsvfw tegnapprms ipfmsvgnay snfydgwshf sqtgvygfnt lnnmgklyfr hvndrtispi tskvriyfkp khvkawvprp prlceythkd nvdyepkgvt tsrtsititn skhmethgaf gqqsgaayvg nyrvvnrhla thtdwqncvw edynrdllvs tttahgcdti archcttgvy fcasrnkhhp vvfegpglve vqesgyypkr yqshvllaag lsepgdcggi lrcehgvigi vtmggegvvg fadvrdllwl eddameqgvk dyveqlgnaf gsgftnqice qvnllkesli gqdsileksl kalvkiisal vivvrnhddl itvtatlali gctsspwrwl kqkvsqyygi smaerqnngw lkkftemtna ckgmewiaik iqkfiewlkv kilpevrekh eflnrlkqlp llesqiatiE QSAPSQSDQe qlfsnvqyfa hycrkyaply aaeakrvfsl ekkmsnyiqf kskcriepvc lllhgspgvg ksvatnligr slaeklnssi yslppdpdhf dgykqqavvi mddlcqnpdg kdvslfcqmv ssvdfvppma aleekgilft spfvlastna gsinaptvsd sralarrfhf dmnievismy nqngkinmpm svktcdeecc pvnfkkccpl vcgkaiqfid rrtqvrysld mlvtemfrey nhrhsvgatl ealfqgppvy reikisvape ippppaiadl lksvdseavr dyckekgwlv pevnstlqie khvsraficl qalttfvsva giiyiiyklf agfqgaytgm pnqkpkvptl rqakvqgpaf efavammkrn sstvkteyge ftmlgiydrw avlprhakpg ptilmndqev gvvdakelvd kdgtnleltl lklnrnekfr dirgflakee vevneavlai ntskfpnmyi pvgqvtdygf lnlggtptkr mlmynfptra gqcggvlmst gkvlgihvgg nghqgfsaal lkhyfndeqg eiefiesskd agypvintps rtklepsvfh qvfegskepa vlrngdprlk anfeeaifsk yignvnthvd eymleaidhy agqlatldis tepmkledav ygtegleald lttsagypyv algikkrdil skktrdltkl kecmdkygln lpmvtyvkde lrsaekvakg ksrlieassl ndsvamrqtf gnlykafhqn pgivtgsavg cdpdlfwski pvmldghlia fdysgydasl spvwfaclkl lleklgythk etnyidylcn shhlyrdkhy fvrggmpsgc sgtsifnsmi nniiirtlml kvykgidldq frmiaygddv iasypwpida sllaeagkdy glimtpadkg ecfnevtwtn vtflkryfra deqypflvhp vmpmkdihes irwtkdpknt qdhvrslcll awhngeqeye efiqkirsvp vgrcltlpaf stlrrkwlds f
| JOB-ID | Q66474_011702Zzfyjn8AAQEAAGkWaLcAAAAH |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q66474 |
| Description | sp|Q66474|POLG_EC06C Genome polyprotein OS=Echovirus 6 (strain Charles) OX=103913 PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 2191 |
| Download predictions | smoothed scores raw scores |