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>Q6DV88_LOOPS
1-12, 32-45, 96-105, 136-189, 197-236, 280-341, 354-397, 405-415, 429-439, 446-463, 495-524, 550-568, 576-619, 636-682, 701-718, 726-735, 775-818, 829-840, 858-941, 955-987, 997-1137, 1153-1161, 1212-1228, 1310-1321, 1349-1357, 1380-1387, 1402-1416, 1436-1449, 1480-1498, 1514-1531, 1542-1555, 1567-1579, 1586-1648, 1679-1692, 1724-1743, 1755-1765, 1773-1782, 1802-1853, 1878-1894, 1915-1939, 1946-1973, 1985-2015, 2044-2091, 2179-2187, 2202-2210, 2225-2237, 2267-2295, 2333-2343, 2398-2421, 2458-2485, 2500-2513, 2532-2542, 2583-2594, 2601-2665, 2680-2689, 2708-2724, 2729-2737, 2750-2781, 2797-2826, 2848-2877, 2894-2903, 2930-2938, 2949-2964, 2996-3017, 3030-3054, 3086-3110, 3164-3182, 3201-3258, 3290-3316, 3329-3353, 3359-3369, 3398-3411
MSGRKAQGKT LGvnmvrrgv rslsnkikqk tKQIGNRPGP SRGVQgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglSSRKR RSHDVltvqf lilgmllmtg gvtlvrknrw lllnvTSEDL GKTFSVGTGN CTTNILEAKY WCPDSMEYNC PNLSPREEPD DIDCWCYGVe nvrvayGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRMGErqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlaV GPAYSAHCIG ITDRDFIEGV HGGTWVSATL EQDKCVTVMA PDKPSLDISL ETVAIDGPAE Arkvcynavl thvKINDKCP STGEAHLAEE NEGDNACKRT YSDRGWGNGC GLFGKGSiva cakfTCAKSM SLFEVdqtki qyviraqlHV GAKQENWNTd iktlkFDALS GSQEAEFTGY GKAtlecqvq tavdfgnsyi aemekeswiv drqwAQDLTL PWQSGSGGVW REMHHLVEFE PPHAatirvl algnqegslk taltgamrvT KDTNDNNLYK LHGGHVSCrv klsalTLKGT SYKMCTDKMS FVKNPTDTGH GTVVMQVKVP KGAPCKIPVi vaddltaain kgilvTVNPI ASTNDDEVLI EVNPPFGDSY IIVGTGDSRL TYQWHKEGSS IGklftqtmk gaerlavmgd AAWDFSSAGG FFTSVGKGih tvfgsAFQGL FGGLNwitkv imgavliwvg intrnmtmsm smilvgvimm flslGVGADQ GCAINFGKRE LKCGDGIFIF RDSDDWLNKY SYYPEDPVkl asivkasfEE GKCGLNSVDS lehemwrsra deinailEEN EVDISVVVQD PKNVYQRGTH PFSRIRDGLQ YGWKTWGKNL VFSPGRKNGS FIIDGKSRKE CPFSNRVWNS FQIEEFGTGV Fttrvymdav feytIDCDGS ILGAAVNGKK SAHGSPTFWM GSHEVNGtwm ihtleaLDYK ECEWPLTHTI GTSVEESEMF MPRSIGGPVS SHNHIPGYKV QTNGPWMQVP LEVKREACPG TSVIIDGNCD GRGKSTRSTT DSGKIIPEWC CRSCTMPPVS FHGSDGCWYP MEIRPRKTHE SHLVRSWVTA GEIHAVPfgl vsmmiamevv lrKRQGPKQM Lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sIRPGLLIGF GLRTLWSPre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlatmlf ctvviigvlH QNSKDTSMQK Tiplvaltlt sylgltqpfl glcaflatRI FGRRSIPvne alaaaglvgv laglafqemE NFLGPIAvgg ilmmlvsvag rVDGLELKKL GEVSWEeeae isgssarydv alseqGEFKL LSEEKVPWDq vvmtslalvg aaihpfalll vlagwlfhvR GARRSGDVLW DIPTPKIIee cehledgiyg ifqSTFLGAS QRGVGVAQGG Vfhtmwhvtr gAFLVRNGKK LIPSWasvke dlvaygGSWK LEGRWDGEEe vqliaAVPGK NVVNVQTKPS LFKVRNGGEI GAVALDYPSG TSGSPIVNRN GEVIGLYGNG ILVGDNSFvs aisqtevkee gkeelqeipt mlkkgmttIL DFHPGAGKTR RFlpqilaec arrrlrtlvl aptrvvlsem keaFHGLDVK FHTQAFSAHG SGRevidamc hatlTYRMLE PTRVVnwevi imDEAHFLDP ASiaargwaa hraranesat iLMTATPPGT SDEFPHSNGE IEDVQTDIPS EPWNTGHDWI LADKRPTAWF LPSiraanvm aaslrkagks vvvlnrkTFE REYPTIKQKK PDFIlatdia emganlcver vldcRTAFKP VLVDEGRKVA IKGPLRISAs saaqrRGRIG RNPNRDGDSY YYSEPTSEDN AHHvcwleas mlldNMEVRG GMVAPLYGVE GTKTPVSPGE MRLRDdqrkv frelvrncdl pvwlswqvak aglKTNDRKW CFEGPEEHEI LNDSGETVKC RAPGGAKKPL RPRWCDERVS Sdqsalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffMS PKGISRMsma mgtmagcgyl mFLGGVKPTH isyimliffv lmvvVIPEPG QQRSIQDnqv ayliigiltl vsvvaanelg mlektkEDLF GKKNLIPSSA SPWSWPDLDL KPGAAwtvyv givtmlspml hhwikveygn lslsgiaqsa svLSFMDKGI PFMkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhGVA KNPVVDGNPT VDIEEAPEMP Alyekklaly lllalslasv amcrtpfsla egivlasAAL GPLIEGNTSL LWNGPMAVSM TGVMRgnyya fvgvmynlwK MKTGRRGSAN GKTlgevwkr elnlldkqqf eLYKRTDIVE VDrdtarrhl aegkvdtgva vsrgtaklrw fhergyvkle grVIDLGCGR GGWCyyaaaq KEVSGVKGFT LGRDGHEKPM NVQSLGWNII TFKDKTDIHR LEPVKCDTLL CDIGESSSSS VTEGErtvrv ldtvekwlaC GVDNFCVKVl apympdvlek lellqrrFGG TVIRNPLSRN STHEmyyvSG ARSNVTFtvn qtsrllmrrM RRPTGKVTLE ADVILPIGTR SVETDKGPLD Keaieerver ikseymTSWF YDNDNPYRTW HYCGSYVTKT SGSAASmvng vikiltypwd rieevtrMAM TDTTPFGQQR VFKEKVDTRA KDPPAGTrki mkvvnrwlfr hlaREKNPRL CTKeefiakv rshaaigayl eeqeqwktaN EAVQDPKFwe lvdeerklHQ QGRCRTCVYN MMGKrekkls efgkakgsra iwymwlgary lefeaLGFLN EDHWASRENS GGGVEGIglq ylgyvirdlA AMDGGGFYAD DTAGWDTRIT EADLddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKAYMDV ISRRDQRGSG qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gcnRLKRMAV SGDDCVVRPI DDrfglalsh lnamskvrkd ISEWQPSKGW NDWENVPFCS HHFHELQLKD GRRIVVPCRE QDELIGRGRV SPGNGWMIke taclskayan mwslmyfhkr dmrllslavS SAVPTSWVPQ GRTTWSIHGK GEWMTTedml evwnrvwiTN NPHMQDKTMV KEWRDVPYLT KRQdklcgSL IGMTNRATWa shihlvihri rtligqekyt dyltvmdRYS VDADLQPGEL I
>Q6DV88_HOTLOOPS
1-43, 72-81, 92-105, 136-153, 196-233, 367-376, 429-438, 829-840, 858-888, 897-908, 1062-1087, 1310-1318, 1406-1428, 1484-1493, 1585-1608, 1874-1892, 1919-1958, 2000-2014, 2026-2034, 2058-2085, 2399-2410, 2525-2580, 2633-2644, 2653-2667, 2710-2721, 2726-2739, 2748-2783, 2851-2880, 2890-2902, 2946-2966, 3086-3095, 3239-3256, 3292-3313, 3331-3341, 3400-3411
MSGRKAQGKT LGVNMVRRGV RSLSNKIKQK TKQIGNRPGP SRGvqgfiff flfniltgkk itahlkrlwk mLDPRQGLAV Lrkvkrvvas lMRGLSSRKR RSHDVltvqf lilgmllmtg gvtlvrknrw lllnvTSEDL GKTFSVGTGN CTTnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaYGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRmgerqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl etvaidgpae arkvcynavl thvkindkcp stgeahLAEE NEGDNAckrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlHV GAKQENWNtd iktlkfdals gsqeaeftgy gkatlecqvq tavdfgnsyi aemekeswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykmctdkms fvknptdtgh gtvvmqvkvp kgapckipvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgtgdsrl tyqwhkegss igklftqtmk gaerlavmgd aawdfssagg fftsvgkgih tvfgsafqgl fgglnwitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfEE GKCGLNSVDS lehemwrsra deinailEEN EVDISVVVQD PKNVYQRGTH PFSRIRDGlq ygwktwGKNL VFSPGRKNgs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levkreacpg tSVIIDGNCD GRGKSTRSTT DSGKIIPewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlatmlf ctvviigvlH QNSKDTSMqk tiplvaltlt sylgltqpfl glcaflatri fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg ilmmlvsvag rvdglELKKL GEVSWEEEAE ISGSSARYdv alseqgefkl lseekvpwdq vvmtslalvg aaihpfalll vlagwlfhvr garRSGDVLW DIPtpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliAAVPGK NVVNVQTKPS LFKVRNGGei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtevkee gkeelqeipt mlkkgmttil dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrvvnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvLNRKTFE REYPTIKQKK PDfilatdia emganlcver vldcrtafKP VLVDEGRKVA IKGPLRISAS SAAQRRGRIG RNPNRDGDsy yyseptsedn ahhvcwleas mlldnmevrg gmvaplygvE GTKTPVSPGE MRLRddqrkv frelvRNCDL PVWLswqvak aglktndrkw cfegpeeHEI LNDSGETVKC RAPGGAKKPL RPRWCdervs sdqsalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyimliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsvvaanelg mlektkedlf gkknlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgVA KNPVVDGNPT vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnyya fvgvmynlwk mktgrrgsan gktlgevwkr elnlLDKQQF ELYKRTDIVE VDRDTARRHL AEGKVDTGVA VSRGTAKLRW FHERGYVKLE grvidlgcgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfKDKTDIHR LEPVkcdtll cdIGESSSSS VTEGERTvrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgG TVIRNPLSRN SthemYYVSG ARSNVTFTVn qtsrllmRRM RRPTGKVTLE ADVILPIGTR SVETDKGPLD KEAieerver ikseymtswf ydndnpyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam TDTTPFGQQR VFKEKVDTRA KDPPAGTRKI mkvvnrwlfR HLAREKNPRL CTkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeeRKLHQ QGRCRTCVYN MMGKREkkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gcnrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelqlkd grrivvpcRE QDELIGRGRV SPGNGWmike taclskayan mwslmyfhkr dmrllslavs sAVPTSWVPQ GRTTWSIHGK GEWmttedml evwnrvwitn NPHMQDKTMV Kewrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdryS VDADLQPGEL I
>Q6DV88_REM465
1-9, 1072-1081, 1415-1424, 1656-1664, 1939-1947, 2085-2094, 2656-2667
MSGRKAQGKt lgvnmvrrgv rslsnkikqk tkqignrpgp srgvqgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglssrkr rshdvltvqf lilgmllmtg gvtlvrknrw lllnvtsedl gktfsvgtgn cttnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaygkcd sagrsrrsrr aidlpthenh glktrqekwm tgrmgerqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl etvaidgpae arkvcynavl thvkindkcp stgeahlaee negdnackrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlhv gakqenwntd iktlkfdals gsqeaeftgy gkatlecqvq tavdfgnsyi aemekeswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykmctdkms fvknptdtgh gtvvmqvkvp kgapckipvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgtgdsrl tyqwhkegss igklftqtmk gaerlavmgd aawdfssagg fftsvgkgih tvfgsafqgl fgglnwitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfee gkcglnsvds lehemwrsra deinaileen evdisvvvqd pknvyqrgth pfsrirdglq ygwktwgknl vfspgrkngs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levkreacpg tsviidgncd gRGKSTRSTT Dsgkiipewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlatmlf ctvviigvlh qnskdtsmqk tiplvaltlt sylgltqpfl glcaflatri fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg ilmmlvsvag rvdglelkkl gevsWEEEAE ISGSsarydv alseqgefkl lseekvpwdq vvmtslalvg aaihpfalll vlagwlfhvr garrsgdvlw diptpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliaavpgk nvvnvqtkps lfkvrnggei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtEVKEE GKEElqeipt mlkkgmttil dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrvvnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvlnrktfe reyptikqkk pdfilatdia emganlcver vldcrtafkp vlvdegrkva ikgplrisAS SAAQRRGrig rnpnrdgdsy yyseptsedn ahhvcwleas mlldnmevrg gmvaplygve gtktpvspge mrlrddqrkv frelvrncdl pvwlswqvak aglktndrkw cfegpeehei lndsgetvkc rapggakkpl rprwCDERVS SDQSalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyimliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsvvaanelg mlektkedlf gkknlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgva knpvvdgnpt vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnyya fvgvmynlwk mktgrrgsan gktlgevwkr elnlldkqqf elykrtdive vdrdtarrhl aegkvdtgva vsrgtaklrw fhergyvkle grvidlgcgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfkdktdihr lepvkcdtll cdigeSSSSS VTEGERTvrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgg tvirnplsrn sthemyyvsg arsnvtftvn qtsrllmrrm rrptgkvtle advilpigtr svetdkgpld keaieerver ikseymtswf ydndnpyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam tdttpfgqqr vfkekvdtra kdppagtrki mkvvnrwlfr hlareknprl ctkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeerklhq qgrcrtcvyn mmgkrekkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvkvlrp apggkaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gcnrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelqlkd grrivvpcre qdeligrgrv spgngwmike taclskayan mwslmyfhkr dmrllslavs savptswvpq grttwsihgk gewmttedml evwnrvwitn nphmqdktmv kewrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdrys vdadlqpgel i
| JOB-ID | Q6DV88_125043Zt7vIn8AAQEAABReAjgAAAAQ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q6DV88 |
| Description | sp|Q6DV88|POLG_YEFVA Genome polyprotein OS=Yellow fever virus (strain Ghana/Asibi/1927) OX=407134 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3411 |
| Download predictions | smoothed scores raw scores |