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>Q6J3P1_LOOPS
1-12, 32-45, 135-189, 197-236, 280-341, 354-397, 405-415, 429-439, 446-463, 495-524, 550-568, 576-619, 636-682, 702-720, 725-734, 775-818, 829-840, 858-941, 955-987, 997-1137, 1153-1161, 1212-1228, 1310-1321, 1349-1357, 1380-1387, 1402-1416, 1436-1449, 1480-1498, 1514-1531, 1542-1555, 1567-1579, 1586-1648, 1679-1692, 1724-1743, 1755-1765, 1773-1782, 1802-1853, 1878-1894, 1915-1939, 1946-1973, 1985-2015, 2043-2090, 2179-2187, 2202-2210, 2225-2237, 2263-2295, 2333-2343, 2398-2421, 2458-2485, 2500-2512, 2532-2542, 2574-2594, 2601-2665, 2680-2689, 2708-2724, 2729-2737, 2750-2781, 2797-2826, 2848-2877, 2894-2903, 2930-2938, 2949-2964, 2996-3017, 3030-3054, 3086-3110, 3162-3182, 3201-3258, 3290-3317, 3328-3353, 3359-3369, 3398-3411
MSGRKAQGKT LGvnmvrrgv rslsnkikqk tKQIGNRPGP SRGVQgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglssrkr rshdalavqf lilgmllmag gvtlvrknrw lllnVTSEDL GKTFSVGAGN CTTNILEAKY WCPDSMEYNC PNLSPREEPD DIDCWCYGVe nvrvayGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRMGErqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlaV GPAYSAHCIG ITDRDFIEGV HGGTWVSATL EQDKCVTVMA PDKPSLDISL ETVAIDGPAE Arkvcynavl thvKINDKCP STGEAHLAEE NEGDNACKRT YSDRGWGNGC GLFGKGSiva cakfTCAKSM SLFEVdqtki qyviraqlHV GAKQENWNTd iktlkFDALS GSQEAEFTGY GKAtlecqvq tavdfgnsyi aemekeswiv drqwAQDLTL PWQSGSGGVW REMHHLVEFE PPHAatirvl algnqegslk taltgamrvT KDTNDNNLYK LHGGHVSCrv klsalTLKGT SYKMCTDKMS FVKNPTDTGH GTVVMQVKVP KGAPCKIPVi vaddltaain kgilvTVNPI ASTNDDEVLI EVNPPFGDSY IIVGTGDSRL TYQWHKEGSS IGklftqtmk gaerlavmgd aAWDFSSAGG FLTSVGKGIH tvfgSAFQGL FGGLswitkv imgavliwvg intrnmtmsm smilvgvimm flslGVGADQ GCAINFGKRE LKCGDGIFIF RDSDDWLNKY SYYPEDPVkl asivkasfEE GKCGLNSVDS lehemwrsra deinailEEN EVDISVVVQD PKNVYQRGTH PFSRIRDGLQ YGWKTWGKNL VFSPGRKNGS FIIDGKSRKE CPFSNRVWNS FQIEEFGTGV Fttrvymdav feytIDCDGS ILGAAVNGKK SAHGSPTFWM GSHEVNGtwm ihtleaLDYK ECEWPLTHTI GTSVEESEMF MPRSIGGPVS SHNHIPGYKV QTNGPWMQVP LEVRREACPG TSVIIDGNCD GRGKSTRSTT DSGKIIPEWC CRSCTMPPVS FHGSDGCWYP MEIRPRKTHE SHLVRSWVTA GEIHAVPfgl vsmmiamevv lrKRQGPKQM Lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sIRPGLLIGF GLRTLWSPre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamlf ctvviigvlH QNSKDTSMQK Tiplvaltlt sylgltqpfl glcaflatRL FGRRSIPvne alaaaglvgv laglafqemE NFLGPIAvgg ilmmlvsvag rVDGLELRKL GEVSWEeeae isgssarydv alseqGEFKL LSEEKVPWDq vvmtslalvg aaihpfalll vlagwlfhvK GARRSGDVLW DIPTPKIIee cehledgiyg ifqSTFLGAS QRGVGVAQGG Vfhtmwhvtr gAFLVRNGKK LIPSWasvke dlvaygGSWK LEGRWDGEEe vqliaAVPGK NVVNVQTKPS LFKVRNGGEI GAVALDYPSG TSGSPIVNRN GEVIGLYGNG ILVGDNSFvs aisqtevkee gkeelqeipt mlkkgmttIL DFHPGAGKTR RFlpqilaec arrrlrtlvl aptrvvlsem keaFHGLDVK FHTQAFSAHG SGRevidamc hatlTYRMLE PTRIVnwevi imDEAHFLDP ASiaargwaa hraranesat iLMTATPPGT SDEFPHSNGE IEDVQTDIPS EPWNTGHDWI LADKRPTAWF LPSiraanvm aaslrkagks vvvlnrkTFE REYPTIKQKK PDFIlatdia emganlcver vldcRTAFKP VLVDEGRKVA IKGPLRISAs saaqrRGRIG RNPNRDGDSY YYSEPTSEDN AHHvcwleas mlldNMEVRG GMVAPLYGVE GTKTPVSPGE MRLRDdqrkv frelvrncdq pvwlswqvak agLKTNDRKW CFEGPDEHEI LNDSGETVKC RAPGGAKKPL RPRWCDERVS sdqsaladfi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti amlfilagll tsgmviffMS PKGISRMsma mgtmagcgyl mFLGGVKPTH isyimliffv lmvvVIPEPG QQRSIQDnqv ayliigiltl vsvvaanelg mlEKTKEDLF GKKDLIPSSA SPWSWPDLDL KPGAAwtvyv givtmlspml hhwikveygn lslsgiaqsa svLSFMDKGI PFMkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhGVA KNPVVDGNPT VDIEEAPEMP Alyekklaly lllalslasv amcrtpfsla egivlasAAL GPLIEGNTSL LWNGPMAVSM TGVMRgnyya fvgvmynlwK MKTGRRGRAN GKtlgevwkr elnlldkqqf eLYKRTDIVE VDrdtarrhl aegkvdtgva vsrgtaklrw fheRGYVKLE GRVTDLGCGR GGWCyyaaaq KEVSGVKGFT LGRDGHEKPM NVQSLGWNII TFKDKTDIHR LEPMKCDTLL CDIGESSSSS VTEGErtmrv ldtvekwlaC GVDNFCVKVl apympdvlek lellqrrFGG TVIRNPLSRN STHEmyyvSG ARSNVTFtvn qtsrllmrrM RRPTGKVTLE ADVILPIGTR SVETDKGPLD Reaieerver ikseymTTWF YDNDNPYRTW HYCGSYVTKT SGSAASmvng vikiltypwd rieevtrMAM TDTTPFGQQR VFKEKVDTRA KDPPAGTrki mkvvnrwlfr hlaREKNPRL CTKeefiakv rshaaigayl eeqeqwktaN EAVQDPKFwe lvdeerklHQ QGRCRTCVYN MMGKrekkls efgkakgsra iwymwlgary lefeaLGFLN EDHWASRENS GGGVEGIglq ylgyvirdlA AMDGGGFYAD DTAGWDTRIT EADLddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKAYMDV ISRRDQRGSG qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesal arleawlteh gCDRLKRMAV SGDDCVVRPI DDrfglalsh lnamskvrkd ISEWQPSKGW NDWENVPFCS HHFHELHLKD GRRIVVPCRE QDELIGRGRV SPGNGWMIke taclskayan mwslmyfhkr dmrllslavS SAVPTSWVPQ GRTTWSIHGK GEWMTTEdml gvwnrvwITN NPHMQDKTVV KEWRDVPYLT KRQdklcgSL IGMTNRATWa shihlvihri rtligqekyt dyltvmdRYS VDADLQPGEL I
>Q6J3P1_HOTLOOPS
1-43, 72-81, 93-104, 136-153, 196-233, 367-376, 429-438, 829-840, 858-888, 897-908, 1061-1087, 1310-1318, 1406-1429, 1585-1608, 1874-1892, 1919-1958, 2000-2014, 2026-2034, 2058-2085, 2399-2410, 2525-2588, 2653-2666, 2710-2721, 2726-2739, 2748-2783, 2788-2806, 2851-2880, 2890-2902, 2946-2966, 3086-3095, 3239-3256, 3292-3313, 3330-3342, 3400-3411
MSGRKAQGKT LGVNMVRRGV RSLSNKIKQK TKQIGNRPGP SRGvqgfiff flfniltgkk itahlkrlwk mLDPRQGLAV Lrkvkrvvas lmRGLSSRKR RSHDalavqf lilgmllmag gvtlvrknrw lllnvTSEDL GKTFSVGAGN CTTnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaYGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRmgerqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl etvaidgpae arkvcynavl thvkindkcp stgeahLAEE NEGDNAckrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlHV GAKQENWNtd iktlkfdals gsqeaeftgy gkatlecqvq tavdfgnsyi aemekeswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykmctdkms fvknptdtgh gtvvmqvkvp kgapckipvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgtgdsrl tyqwhkegss igklftqtmk gaerlavmgd aawdfssagg fltsvgkgih tvfgsafqgl fgglswitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfEE GKCGLNSVDS lehemwrsra deinailEEN EVDISVVVQD PKNVYQRGTH PFSRIRDGlq ygwktwGKNL VFSPGRKNgs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levrreacpg TSVIIDGNCD GRGKSTRSTT DSGKIIPewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamlf ctvviigvlH QNSKDTSMqk tiplvaltlt sylgltqpfl glcaflatrl fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg ilmmlvsvag rvdglELRKL GEVSWEEEAE ISGSSARYDv alseqgefkl lseekvpwdq vvmtslalvg aaihpfalll vlagwlfhvk garrsgdvlw diptpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliAAVPGK NVVNVQTKPS LFKVRNGGei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtevkee gkeelqeipt mlkkgmttil dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrivnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvLNRKTFE REYPTIKQKK PDfilatdia emganlcver vldcrtafKP VLVDEGRKVA IKGPLRISAS SAAQRRGRIG RNPNRDGDsy yyseptsedn ahhvcwleas mlldnmevrg gmvaplygvE GTKTPVSPGE MRLRddqrkv frelvRNCDQ PVWLswqvak aglktndrkw cfegpdeHEI LNDSGETVKC RAPGGAKKPL RPRWCdervs sdqsaladfi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti amlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyimliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsvvaanelg mlektkedlf gkkdlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgVA KNPVVDGNPT vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnyya fvgvmynlwk mktgrrgran gktlgevwkr elnlLDKQQF ELYKRTDIVE VDRDTARRHL AEGKVDTGVA VSRGTAKLRW FHERGYVKLE GRVTDLGCgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfkdktdihr lepmkcdtll cdIGESSSSS VTEGERtmrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgG TVIRNPLSRN SthemYYVSG ARSNVTFTVn qtsrllmRRM RRPTGKVTLE ADVILPIGTR SVETDKGPLD REAieerVER IKSEYMTTWF YDNDNPyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam TDTTPFGQQR VFKEKVDTRA KDPPAGTRKI mkvvnrwlfR HLAREKNPRL CTkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeeRKLHQ QGRCRTCVYN MMGKREkkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesal arleawlteh gcdrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelhlkd grrivvpcRE QDELIGRGRV SPGNGWmike taclskayan mwslmyfhkr dmrllslavs sAVPTSWVPQ GRTTWSIHGK GEWmttedml gvwnrvwitN NPHMQDKTVV KEwrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdryS VDADLQPGEL I
>Q6J3P1_REM465
1-9, 1072-1081, 1415-1424, 1656-1664, 1939-1947, 2085-2094, 2656-2666
MSGRKAQGKt lgvnmvrrgv rslsnkikqk tkqignrpgp srgvqgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglssrkr rshdalavqf lilgmllmag gvtlvrknrw lllnvtsedl gktfsvgagn cttnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaygkcd sagrsrrsrr aidlpthenh glktrqekwm tgrmgerqlq kierwlvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl etvaidgpae arkvcynavl thvkindkcp stgeahlaee negdnackrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlhv gakqenwntd iktlkfdals gsqeaeftgy gkatlecqvq tavdfgnsyi aemekeswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykmctdkms fvknptdtgh gtvvmqvkvp kgapckipvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgtgdsrl tyqwhkegss igklftqtmk gaerlavmgd aawdfssagg fltsvgkgih tvfgsafqgl fgglswitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfee gkcglnsvds lehemwrsra deinaileen evdisvvvqd pknvyqrgth pfsrirdglq ygwktwgknl vfspgrkngs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levrreacpg tsviidgncd gRGKSTRSTT Dsgkiipewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggmmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamlf ctvviigvlh qnskdtsmqk tiplvaltlt sylgltqpfl glcaflatrl fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg ilmmlvsvag rvdglelrkl gevsWEEEAE ISGSsarydv alseqgefkl lseekvpwdq vvmtslalvg aaihpfalll vlagwlfhvk garrsgdvlw diptpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliaavpgk nvvnvqtkps lfkvrnggei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtEVKEE GKEElqeipt mlkkgmttil dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrivnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvlnrktfe reyptikqkk pdfilatdia emganlcver vldcrtafkp vlvdegrkva ikgplrisAS SAAQRRGrig rnpnrdgdsy yyseptsedn ahhvcwleas mlldnmevrg gmvaplygve gtktpvspge mrlrddqrkv frelvrncdq pvwlswqvak aglktndrkw cfegpdehei lndsgetvkc rapggakkpl rprwCDERVS SDQSaladfi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti amlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyimliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsvvaanelg mlektkedlf gkkdlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi illvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgva knpvvdgnpt vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnyya fvgvmynlwk mktgrrgran gktlgevwkr elnlldkqqf elykrtdive vdrdtarrhl aegkvdtgva vsrgtaklrw fhergyvkle grvtdlgcgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfkdktdihr lepmkcdtll cdigeSSSSS VTEGERtmrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgg tvirnplsrn sthemyyvsg arsnvtftvn qtsrllmrrm rrptgkvtle advilpigtr svetdkgpld reaieerver ikseymttwf ydndnpyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam tdttpfgqqr vfkekvdtra kdppagtrki mkvvnrwlfr hlareknprl ctkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeerklhq qgrcrtcvyn mmgkrekkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvkvlrp apggkaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesal arleawlteh gcdrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelhlkd grrivvpcre qdeligrgrv spgngwmike taclskayan mwslmyfhkr dmrllslavs savptswvpq grttwsihgk gewmttedml gvwnrvwitn nphmqdktvv kewrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdrys vdadlqpgel i
| JOB-ID | Q6J3P1_125514Zt7wMn8AAQEAABRfHtwAAABU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q6J3P1 |
| Description | sp|Q6J3P1|POLG_YEFVC Genome polyprotein OS=Yellow fever virus (isolate Ivory Coast/1999) OX=407136 PE=3 SV=1 |
| Title/ID | none |
| Sequence length | 3411 |
| Download predictions | smoothed scores raw scores |