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>Q72498_LOOPS
1-69, 80-107, 125-141, 148-182, 198-228, 245-333, 341-351, 367-409, 440-452, 464-477, 500-519, 538-550, 564-577, 586-629, 643-654, 661-669, 691-701, 737-746, 758-783, 797-810, 820-838, 849-864, 900-911, 940-977, 987-1003
FFREDLAFPQ GKAREFSSEQ TRANSPTRRE LQVWGRDNNS LSEAGADRQG TVSFSFPQIT LWQRPLVTIk iggqlkealL DTGADDTVLE EMNLPGRWKP KMIGGIGgfi kvrqydqili eicgHKAIGT VLVGPTPVNI IgrnlltQIG CTLNFPISPI ETVPVKLKPG MDGPKVKQWP LTeekikalv eictemeKEG KISKIGPENP YNTPVFAIKK KDSTKWRKlv dfrelnkrtq dfweVQLGIP HPAGLKQKKS VTVLDVGDAY FSVPLDKDFR KYTAFTIPSI NNETPGIRYQ YNVLPQGWKG SPAIFQCSMT KILEPFRKQN PDVviyqymd DLYVGSDLEI Gqhrtkieel rqhllrWGFT TPDKKHQKEP PFLWMGYELH PDKWTVQPIV LPEKDSWTVn diqklvgkln wasqiyagik vrqlckllrG TKALTEVVPL TEeaelelae nreILKEPVH GVYYDPSkdl iaeiqkqgqg qwtyqiyqeP FRNLKTGKYA RMKGAHTNDv kqlteavqki atesiviWGK TPKFKLPIQK etweawwtey wqaTWIPEWE FVNTPPLvkl wyqleKEPII GAETFYVDGA ANRETKLGKA GYVTDRGRQK VVPLTDTTNq ktelqaihla lqDSGLEVNI VTDSqyalgi IQAQPDKSEs elvsqiieql ikkekvylaw VPAHKGIGGN Eqvdklvsag irkvlfldgi dkaqeeheky hsnwraMASD FNLPPVvake ivascdkCQL KGEAMHGQVD CSPGIWQLDC THLegkvilv avhvasGYIE AEVIPAETGQ etayfllklA GRWPVKTVHT DNGSNFTStt vkaacwwaGI KQEFGIPYNP QSQGviesmn kelkkiigqv rdqaehlkta vqmavfihnF KRKGGIGGYS Agerivdiia tdiqtkelqk qitkiqnfrV YYRDSRDPVW KGPAKLLWKG EGAVVIQDNS DIKVVPRrka kiirdyGKQM AGDDCVASRQ DED
>Q72498_HOTLOOPS
1-36, 90-103, 162-183, 198-227, 247-261, 271-279, 286-297, 369-379, 442-454, 459-469, 533-547, 602-630, 828-838, 933-948, 957-978, 984-1003
FFREDLAFPQ GKAREFSSEQ TRANSPTRRE LQVWGRdnns lseagadrqg tvsfsfpqit lwqrplvtik iggqlkeall dtgaddtvlE EMNLPGRWKP KMIggiggfi kvrqydqili eicghkaigt vlvgptpvni igrnlltqig ctlnfpispi eTVPVKLKPG MDGPKVKQWP LTEekikalv eictemeKEG KISKIGPENP YNTPVFAIKK KDSTKWRklv dfrelnkrtq dfwevqLGIP HPAGLKQKKS Vtvldvgday FSVPLDKDFr kytafTIPSI NNETPGIryq ynvlpqgwkg spaifqcsmt kilepfrkqn pdvviyqymd dlyvgsdlei gqhrtkieel rqhllrwgFT TPDKKHQKEp pflwmgyelh pdkwtvqpiv lpekdswtvn diqklvgkln wasqiyagik vrqlckllrg tKALTEVVPL TEEAelelAE NREILKEPVh gvyydpskdl iaeiqkqgqg qwtyqiyqep frnlktgkya rmkgahtndv kqlteavqki atESIVIWGK TPKFKLPiqk etweawwtey wqatwipewe fvntpplvkl wyqlekepii gaetfyvdga aNRETKLGKA GYVTDRGRQK VVPLTDTTNQ ktelqaihla lqdsglevni vtdsqyalgi iqaqpdkses elvsqiieql ikkekvylaw vpahkgiggn eqvdklvsag irkvlfldgi dkaqeeheky hsnwramasd fnlppvvake ivascdkcql kgeamhgqvd cspgiwqldc thlegkvilv avhvasgyie aevipaetgq etayfllkla grwpvktVHT DNGSNFTStt vkaacwwagi kqefgipynp qsqgviesmn kelkkiigqv rdqaehlkta vqmavfihnf krkggiggys agerivdiia tdiqtkelqk qiTKIQNFRV YYRDSRDPvw kgpaklLWKG EGAVVIQDNS DIKVVPRRka kiiRDYGKQM AGDDCVASRQ DED
>Q72498_REM465
1-32, 665-673, 926-935, 970-1003
FFREDLAFPQ GKAREFSSEQ TRANSPTRRE LQvwgrdnns lseagadrqg tvsfsfpqit lwqrplvtik iggqlkeall dtgaddtvle emnlpgrwkp kmiggiggfi kvrqydqili eicghkaigt vlvgptpvni igrnlltqig ctlnfpispi etvpvklkpg mdgpkvkqwp lteekikalv eictemekeg kiskigpenp yntpvfaikk kdstkwrklv dfrelnkrtq dfwevqlgip hpaglkqkks vtvldvgday fsvpldkdfr kytaftipsi nnetpgiryq ynvlpqgwkg spaifqcsmt kilepfrkqn pdvviyqymd dlyvgsdlei gqhrtkieel rqhllrwgft tpdkkhqkep pflwmgyelh pdkwtvqpiv lpekdswtvn diqklvgkln wasqiyagik vrqlckllrg tkaltevvpl teeaelelae nreilkepvh gvyydpskdl iaeiqkqgqg qwtyqiyqep frnlktgkya rmkgahtndv kqlteavqki atesiviwgk tpkfklpiqk etweawwtey wqatwipewe fvntpplvkl wyqlekepii gaetfyvdga anretklgka gyvtdrgrqk vvpltdttnq ktelqaihla lqdsglevni vtdsqyalgi iqaqPDKSES ELVsqiieql ikkekvylaw vpahkgiggn eqvdklvsag irkvlfldgi dkaqeeheky hsnwramasd fnlppvvake ivascdkcql kgeamhgqvd cspgiwqldc thlegkvilv avhvasgyie aevipaetgq etayfllkla grwpvktvht dngsnftstt vkaacwwagi kqefgipynp qsqgviesmn kelkkiigqv rdqaehlkta vqmavfihnf krkggiggys agerivdiia tdiqtKELQK QITKIqnfrv yyrdsrdpvw kgpakllwkg egavviqdnS DIKVVPRRKA KIIRDYGKQM AGDDCVASRQ DED
| JOB-ID | Q72498_045009ZukKgX8AAQEAADCSG3kAAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q72498 |
| Description | tr|Q72498|Q72498_9HIV1 POL polyprotein (Fragment) OS=Human immunodeficiency virus 1 OX=11676 GN=pol PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1003 |
| Download predictions | smoothed scores raw scores |