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>Q81817_LOOPS
52-61, 131-145, 177-185, 220-233, 245-253, 260-296, 320-331, 354-451, 462-536, 541-600, 622-670, 695-704, 714-806, 817-827, 841-858, 869-879, 887-900, 962-974, 983-992, 1050-1060, 1069-1079, 1090-1101, 1143-1152, 1158-1165, 1177-1185, 1198-1214, 1239-1252, 1269-1352, 1372-1417, 1427-1441, 1448-1499, 1512-1538, 1552-1608, 1624-1689, 1695-1725, 1730-1749, 1781-1803, 1821-1862, 1874-1893, 1901-1938, 1954-1985, 2001-2009, 2036-2086, 2093-2105, 2139-2153, 2161-2174, 2183-2192, 2206-2214, 2226-2241, 2246-2260, 2276-2284
maarvcaclw mmlliaqaea tlenlvvlna asvagahgll sflvffcaaw yIKGRLVPGA Ayalygvwpl lllllalppr ayamdremaa scggavfvgl vlltlspyyk vflarliwwl qyfitraeah LQVWVPPLNV RGGRDaiill tcavhpelif ditklllail gplmvlQAGM TRVPYfvraq gliracmlvr kvagghyvqm afmklaaltG TYVYDHLTPL RDWahaglrd lavaVEPVVF SDMetkiitW GADTAACGDI ISGLPVSARR GKEILLGPAD SFGEQGwrll apitaysqqt rgllgciitS LTGRDKNQVD Gevqvlstat qsflatcvng vcwTVYHGAG SKTLAGPKGP ITQMYTNVDQ DLVGWPAPPG ARSMTPCTCG SSDLYLVTRH ADVIPVRRRG DSRGSLLSPR PVSYLKGSSG GPLLCPSGHV Vgifraavct rGVAKAVDFI PVESMETTMR SPVFTDNSSP PAVPQTFQVA HLHAPTGSGK STKVPAAYAA QGYKVRVLNP SVAATLgfga YMSKAHGIEP NIRTGVRTIT TGGPITYSTY GKFLADGGCS GGAYDIIICD ECHSTDWTTI lgigtvldqa etagarlvvl aTATPPGSIT VPHPNIEEVA LSNTGEIPFY GKAIPIEAIK GGRHLIFCHS kkkcdelaak ltglglnava yyrgLDVSVI PTSGdvvvva tdaLMTGFTG DFDSVIDCNT CVTQTVDFSL DPTFTIETTT VPQDAVSRSQ RRGRTGRGRS GIYRFVTPGE RPSGMFDSSV LCECYDAGCA WYELTPaett vrlrayLNTP GLPVCQDhle fwesvftglt HIDAHFLSQT KQAGDNFPyl vayqatvcAR AQAPPPSWDq mwkcliRLKP TLHGPTPLLY rlgavqneit lthpitkfvm acmsadlevv tstwvlvggv laalaayclt tgsvvivgri iLSGRPAVVP DREVlyrefd emEECASHLP YIeqgmqlae qfkqkalgll qtatkqaeaa apvvesrwra leafwakhmw nfisgiqylA GLSTLPGNPA iaslmaftAS ITSPLTTQNt llfnilggwV AAQLAPPSAA Safvgagiag aaigsiglgk vlvdilagyg agvagalvaf kvMSGEAPSA EDlvnllPAI LSPGAlvvgi vcaailRRHV GPGEGavqwm nrliafaSRG NHVSPTHYVP ESDAaarvtq ilssltitql lkrlhqwiNE DCSTPCSGSW LRdvwdwict vltdfktwLQ SKLLPKLPGV PFFSCQRGYK GVWRGDGIMQ TTCPCGAQIT GHVKNGSMRI VGPKTCSNTW HGTFPINAYT TGPCTPSPAP NYsralwrva aeeyveitrv gDFHYVTGMT TDNVKCPCQV PAPEFFTELD GVRLHRYAPA CRPLLRVdvt fqvglnQYLV GSQLPCEPEP DvavltsMLT DPSHITAETA KRRPARGSPP SLASSSASQL SAPSLKATCT THHDSPDADl ieanllwrqe mGGNITRVES ENKVVILDSF DPLRAEEDer evsvaaeilr kSKKFPPALP IWARPDYNPP LLESWKSPDY VPPAVHGCPL PPTTGPPIPP PRKKRTVVlt estvssalae latKTFGSSG SSAVDSGTAT APPDQTSDDG DKESDIESYS SMPPLEGEPG DPDLSDGSWS TVSGEAGDDi vccsMSYTWT GALITPCAAE ESKLPINPLS NSLLRhhsmV YSTTSRSASL RQKKVTFDRm qvlddhyrdv lkemkakast vkarllsiee ACKLTPPHSA KSKFGYGAKD VRSlssravn hirsvwedll EDTETPIDTT IMAKNEVFCV QPEKGGRKPA RLIVFPDLGV RVcekmalyd vvsTLPQAVM GPSYGFQYSP GQRveflvnt WKSKKCPMGF SYDTRCFDST VTENDIRTEE SIYQCCDLap earqaikslt erlYIGGPLT NSKGQNCGYR RCRASGVLTT SCGNTltcyl kataacraak LQDCTMLVNg ddlvvicesa gtqedaaslr vfteaMTRYS APPGDPPQPE YDLELITSCS SNVSVAHDAS GKRVYYLTRD PTTPLAraaw etVRHTPVNS WLGNIimyap tlwarmilmt hffsillaqe qlekaldcQI YGACYSIEPL DLPqiierlh GLSAFSLHSY SPGEinrvas clRKLGVPPL RVwrhrarsv rakllSQGGR AATCgkylfn wavrtKLKLT PIPAASQLDL SswfvAGYSG GDIYHSLSRA rprwfmlcll llsvgVGVYL LPNR
>Q81817_HOTLOOPS
412-430, 504-512, 544-557, 624-633, 745-784, 960-971, 1273-1284, 1457-1479, 1514-1524, 1529-1539, 1549-1563, 1592-1602, 1625-1652, 1732-1749, 1780-1798, 1839-1855, 1956-1968, 2063-2074, 2092-2104, 2203-2213, 2274-2284
maarvcaclw mmlliaqaea tlenlvvlna asvagahgll sflvffcaaw yikgrlvpga ayalygvwpl lllllalppr ayamdremaa scggavfvgl vlltlspyyk vflarliwwl qyfitraeah lqvwvpplnv rggrdaiill tcavhpelif ditklllail gplmvlqagm trvpyfvraq gliracmlvr kvagghyvqm afmklaaltg tyvydhltpl rdwahaglrd lavavepvvf sdmetkiitw gadtaacgdi isglpvsarr gkeillgpad sfgeqgwrll apitaysqqt rgllgciits ltgrdknqvd gevqvlstat qsflatcvng vcwtvyhgag sktlagpkgp itqmytnvdq dlvgwpappg arsmtpctcg ssdlylvtrh aDVIPVRRRG DSRGSLLSPR pvsylkgssg gpllcpsghv vgifraavct rgvakavdfi pvesmettmr spvftdnssp pavpqtfqva hlhAPTGSGK STkvpaayaa qgykvrvlnp svaatlgfga ymsKAHGIEP NIRTGVRtit tggpitysty gkfladggcs ggaydiiicd echstdwtti lgigtvldqa etagarlvvl ataTPPGSIT VPHpnieeva lsntgeipfy gkaipieaik ggrhlifchs kkkcdelaak ltglglnava yyrgldvsvi ptsgdvvvva tdalmtgftg dfdsvidcnt cvtqtvdfsl dptfTIETTT VPQDAVSRSQ RRGRTGRGRS GIYRFVTPGE RPSGmfdssv lcecydagca wyeltpaett vrlraylntp glpvcqdhle fwesvftglt hidahflsqt kqagdnfpyl vayqatvcar aqapppswdq mwkclirlkp tlhgptplly rlgavqneit lthpitkfvm acmsadlevv tstwvlvggv laalaayclt tgsvvivgrI ILSGRPAVVP Drevlyrefd emeecashlp yieqgmqlae qfkqkalgll qtatkqaeaa apvvesrwra leafwakhmw nfisgiqyla glstlpgnpa iaslmaftas itsplttqnt llfnilggwv aaqlappsaa safvgagiag aaigsiglgk vlvdilagyg agvagalvaf kvmsgeapsa edlvnllpai lspgalvvgi vcaailrrhv gpgegavqwm nrliafasrg nhvspthyvp esdaaarvtq ilssltitql lkrlhqwine dcstpcsgsw lrdvwdwict vltdfktwlq skLLPKLPGV PFFScqrgyk gvwrgdgimq ttcpcgaqit ghvkngsmri vgpktcsntw hgtfpinayt tgpctpspap nysralwrva aeeyveitrv gdfhyvtgmt tdnvkcpcqv papeffteld gvrlhryapa crpllrvdvt fqvglnqylv gsqlpcepep dvavltsmlt dpshitAETA KRRPARGSPP SLASSSASQl sapslkatct thhdspdadl ieanllwrqe mggNITRVES ENKVvildSF DPLRAEEDEr evsvaaeiLR KSKKFPPALP IWArpdynpp lleswkspdy vppavhgcpl pPTTGPPIPP PRkkrtvvlt estvssalae latkTFGSSG SSAVDSGTAT APPDQTSDDG DKesdiesys smpplegepg dpdlsdgsws tvsgeagddi vccsmsytwt galitpcaae esklpinpls nsllrhhsmv ySTTSRSASL RQKKVTFDRm qvlddhyrdv lkemkakast vkarllsieE ACKLTPPHSA KSKFGYGAkd vrslssravn hirsvwedll edtetpidtt imaknevfCV QPEKGGRKPA RLIVFpdlgv rvcekmalyd vvstlpqavm gpsygfqysp gqrveflvnt wkskkcpmgf sydtrcfdst vtendirtee siyqccdlap earqaikslt erlyiGGPLT NSKGQNCGyr rcrasgvltt scgntltcyl kataacraak lqdctmlvng ddlvvicesa gtqedaaslr vfteamtrys appgdppqpe ydlelitscs snVSVAHDAS GKRVyyltrd pttplaraaw eTVRHTPVNS WLGNiimyap tlwarmilmt hffsillaqe qlekaldcqi ygacysiepl dlpqiierlh glsafslhsy spgeinrvas clrklgvppl rvwrhrarsv raKLLSQGGR AATcgkylfn wavrtklklt pipaasqldl sswfvagysg gdiyhslsra rprwfmlcll llsVGVGVYL LPNR
>Q81817_REM465
753-766, 1013-1024, 1459-1490, 1625-1659, 1730-1740
maarvcaclw mmlliaqaea tlenlvvlna asvagahgll sflvffcaaw yikgrlvpga ayalygvwpl lllllalppr ayamdremaa scggavfvgl vlltlspyyk vflarliwwl qyfitraeah lqvwvpplnv rggrdaiill tcavhpelif ditklllail gplmvlqagm trvpyfvraq gliracmlvr kvagghyvqm afmklaaltg tyvydhltpl rdwahaglrd lavavepvvf sdmetkiitw gadtaacgdi isglpvsarr gkeillgpad sfgeqgwrll apitaysqqt rgllgciits ltgrdknqvd gevqvlstat qsflatcvng vcwtvyhgag sktlagpkgp itqmytnvdq dlvgwpappg arsmtpctcg ssdlylvtrh advipvrrrg dsrgsllspr pvsylkgssg gpllcpsghv vgifraavct rgvakavdfi pvesmettmr spvftdnssp pavpqtfqva hlhaptgsgk stkvpaayaa qgykvrvlnp svaatlgfga ymskahgiep nirtgvrtit tggpitysty gkfladggcs ggaydiiicd echstdwtti lgigtvldqa etagarlvvl atatppgsit vphpnieeva lsntgeipfy gkaipieaik ggrhlifchs kkkcdelaak ltglglnava yyrgldvsvi ptsgdvvvva tdalmtgftg dfdsvidcnt cvtqtvdfsl dptftiettt vpQDAVSRSQ RRGRTGrgrs giyrfvtpge rpsgmfdssv lcecydagca wyeltpaett vrlraylntp glpvcqdhle fwesvftglt hidahflsqt kqagdnfpyl vayqatvcar aqapppswdq mwkclirlkp tlhgptplly rlgavqneit lthpitkfvm acmsadlevv tstwvlvggv laalaayclt tgsvvivgri ilsgrpavvp drevlyrefd emeecashlp yieqgmqlae qfkqkalgll qtATKQAEAA APVVesrwra leafwakhmw nfisgiqyla glstlpgnpa iaslmaftas itsplttqnt llfnilggwv aaqlappsaa safvgagiag aaigsiglgk vlvdilagyg agvagalvaf kvmsgeapsa edlvnllpai lspgalvvgi vcaailrrhv gpgegavqwm nrliafasrg nhvspthyvp esdaaarvtq ilssltitql lkrlhqwine dcstpcsgsw lrdvwdwict vltdfktwlq skllpklpgv pffscqrgyk gvwrgdgimq ttcpcgaqit ghvkngsmri vgpktcsntw hgtfpinayt tgpctpspap nysralwrva aeeyveitrv gdfhyvtgmt tdnvkcpcqv papeffteld gvrlhryapa crpllrvdvt fqvglnqylv gsqlpcepep dvavltsmlt dpshitaeTA KRRPARGSPP SLASSSASQL SAPSLKATCT thhdspdadl ieanllwrqe mggnitrves enkvvildsf dplraeeder evsvaaeilr kskkfppalp iwarpdynpp lleswkspdy vppavhgcpl ppttgppipp prkkrtvvlt estvssalae latkTFGSSG SSAVDSGTAT APPDQTSDDG DKESDIESYs smpplegepg dpdlsdgsws tvsgeagddi vccsmsytwt galitpcaae esklpinpls nsllrhhsmV YSTTSRSASL rqkkvtfdrm qvlddhyrdv lkemkakast vkarllsiee ackltpphsa kskfgygakd vrslssravn hirsvwedll edtetpidtt imaknevfcv qpekggrkpa rlivfpdlgv rvcekmalyd vvstlpqavm gpsygfqysp gqrveflvnt wkskkcpmgf sydtrcfdst vtendirtee siyqccdlap earqaikslt erlyiggplt nskgqncgyr rcrasgvltt scgntltcyl kataacraak lqdctmlvng ddlvvicesa gtqedaaslr vfteamtrys appgdppqpe ydlelitscs snvsvahdas gkrvyyltrd pttplaraaw etvrhtpvns wlgniimyap tlwarmilmt hffsillaqe qlekaldcqi ygacysiepl dlpqiierlh glsafslhsy spgeinrvas clrklgvppl rvwrhrarsv rakllsqggr aatcgkylfn wavrtklklt pipaasqldl sswfvagysg gdiyhslsra rprwfmlcll llsvgvgvyl lpnr
| JOB-ID | Q81817_145458Zt8MQn8AAQEAABRfIUgAAABM |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q81817 |
| Description | tr|Q81817|Q81817_9HEPC Genome polyprotein OS=Hepatitis C virus genotype 2 OX=40271 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2284 |
| Download predictions | smoothed scores raw scores |