Download PostScript file
>Q82081_LOOPS
1-26, 34-56, 61-91, 104-188, 196-240, 246-371, 381-425, 448-455, 461-475, 494-534, 585-633, 651-668, 687-757, 765-781, 817-843, 848-868, 874-894, 899-988, 1011-1020, 1091-1104, 1161-1170, 1213-1236, 1249-1268, 1276-1287, 1293-1312, 1319-1335, 1368-1399, 1424-1457, 1511-1539, 1555-1606, 1613-1621, 1641-1705, 1725-1767, 1780-1790, 1818-1844, 1865-1873, 1893-1901, 1915-1961, 1991-2010, 2029-2039, 2045-2056, 2065-2081, 2092-2128, 2155-2168
MGAQVSTQKS GSHENQNILT NGSNQTftvi nyyKDAASSS SAGQSFSMDP SKFTEPvkdl MLKGAPALNS PNVEACGYSD RVQQITLGNS Tittqeaana ivcYAEWPEY LSDNDASDVN KTSKPDISVC RFYTLDSKTW KATSKGWCWK LPDALKDMGV FGQNMFYHSL GRTGYTIHVQ CNATKFHSgc llvvvIPEHQ LASHEGGTVS VKYKYTHPGD RGIDLDTVEV AGGPTSDAIY nmdgtLLGNL LIFPHQFINL RTNNTATIVV PYINSVPIDS MTRHNNVSLM VVPIAPLNAP TGSSPTLPVT VTIAPMCTEF TGIRSRSIVP QGLPTTTLPG SGQFLTTDDR QSPSALPSYE PTPRIHIPGK Vrnlleiiqv GTLIPMNNTG TNDNVTNYLI PLHADRQNEQ IFGTKLYIGD GVFKTtllge iaqyythwsg slrislmYTG PALSSakiil AYTPPGTRGP EDRKEamlgt hvvwdiglqs tivMTIPWTS GVQFRYTDPD TYTSAGYLSC WYQTSLILPP QTSGqvylls fisacpdfkl rlmkdtqtis qtdaltegls deleevivek tkqtLASVSS GPKHTQSVPA LTANETGATL PTRPSDNVET RTTYMHFNGS ETDvesflgr aacvhvteik NKNAAGLDNH RKEGLFNDwk inlsslvqlr kklelfTYVR FDSEYTILAT ASQPEASSYS SNLTVQAMYV PPGAPNPKEW DDYTWQSASN PSVFFKVGET SRFSVPFvgi asayNCFYDG YSHDDPDTPY Gitvlnhmgs mafrvvnehd vhttivkirv yhrakhVEAW IPRAPRALPY VSIGRTNYPR DSKtiikKRT NIKTYGLGPR FGGVFTSNvk iinYHLMTPD DHLNLVAPYP NRDLavvaTG AHGAETIPHC NCTSGVYYSR YYRKFYPIIC ERPTNIWIEG SSYYPSRYQA GVMKGVGPAE PGDCGGILRC IHGPIGLLTA GGGGYVCFad irqldfiade qglgdyitsl GRAFGTGFTD qisakvcelq dvakdflttk vlskvvkmis alviicrnhd dlvtvtatla llgcdgspwr flkmyiskhf QVPYIERQAN DGWFrkfnda cnaakglewi ankiskliew iknkvlpqar eklefcsklk qldilerqia SIHDSNPTQE kreqlfnnvl wleqmsqkfs plyaseakri rdlknkitny mqFKSKQRTE PVCVLIHGTP GSGKSLttsi vgralaehFN SSVYSLPPDP KHFDGYQQqe vvimdDLNQN PDGQDISmfc qmVSSVDFLP PMASLDNKGM LFtsnfvlAS TNSNTLSPPT ILNPEalirr fgfdldicmh stytkngkln aamatslCKD CHQPSNFKKC CPLVCGKAIS LVDRVSNVRf sidqlvtaii ndyknkvkit dslEVLFQGP VYKDLEIDIC NTPPPECISD LLKSVDSeev reyckkkkwi ipqistnier avnqasmiin tilmfvstlg ivyviyklfa QTQGPYSGNP VHNKLKPPTL KPVVVQGPNt efalsllrkn iltiTTEKGE FTSLGIHDRI CVLPTHAQPG DNVLVNGQKI QIKDKYKLVD PDNTNLelti ieLDRNEKFR Dirgfisedl egldatlvvh SNGFTNTILD VGPITMAGLI NLSNTPTTRM IRYDYPTKTG QCGGVLCTTG KIFGIHVGGN GRRGFsaqlk kqyfvekqgl ivskQKVRDI GLNPINTPTK TKLHPSVFYN VFPGSKQPAV LNDNDPRlev klaeslfskY KGNVQMEPTE nmliavdhya gqlmsldist keltlkeALY GVDGLEPIDV TTSAGYPYVS LGIKkrdiln ketqdvekmk fyldKYGIDL PLVtyikdel rsvdkvrlgk srLIEASSLN Dsvnmrmklg nlykAFHQNP GIITESAVGC DPDVFWSVIP CLMDGHLMAF DYSNFDASLS Pvwfeclekv lnklgfkqps liqsicnthh IFRDEIYRVE GGMPSGCSGT sifnsminni iirtlildAY KGIDLDSLRi laygDDLIVS YPFELDsnil aaigKNYGLT ITPPDKSDAF Tkitwenitf lKRYFRPDPQ FPFLIHPVMP MQDIYESIRW TRDPRNTQdh vrslcmlawh sgekdyndfi tkirTTDIGK CLNLPEYSvl rrrwldlf
>Q82081_HOTLOOPS
1-23, 118-129, 134-145, 383-392, 583-619, 651-662, 701-710, 815-863, 901-913, 1161-1171, 1212-1221, 1228-1235, 1321-1330, 1465-1476, 1592-1604, 1609-1619, 1719-1744, 1823-1852, 1861-1871, 1880-1903, 2155-2178
MGAQVSTQKS GSHENQNILT NGSnqtftvi nyykdaasss sagqsfsmdp skftepvkdl mlkgapalns pnveacgysd rvqqitlgns tittqeaana ivcyaewpey lsdndasDVN KTSKPDISVc rfyTLDSKTW KATSKgwcwk lpdalkdmgv fgqnmfyhsl grtgytihvq cnatkfhsgc llvvvipehq lasheggtvs vkykythpgd rgidldtvev aggptsdaiy nmdgtllgnl lifphqfinl rtnntativv pyinsvpids mtrhnnvslm vvpiaplnap tgssptlpvt vtiapmctef tgirsrsivp qglptttlpg sgqflttddr qspsalpsye ptprihipgk vrnlleiiqv gtLIPMNNTG TNdnvtnyli plhadrqneq ifgtklyigd gvfkttllge iaqyythwsg slrislmytg palssakiil aytppgtrgp edrkeamlgt hvvwdiglqs tivmtipwts gvqfrytdpd tytsagylsc wyqtslilpp qtsgqvylls fisacpdfkl rlmkdtqtis qtdaltegls deleevivek tkQTLASVSS GPKHTQSVPA LTANETGATL PTRPSDNVEt rttymhfngs etdvesflgr aacvhvteik NKNAAGLDNH RKeglfndwk inlsslvqlr kklelftyvr fdseytilat ASQPEASSYS snltvqamyv ppgapnpkew ddytwqsasn psvffkvget srfsvpfvgi asayncfydg yshddpdtpy gitvlnhmgs mafrvvnehd vhttivkirv yhraKHVEAW IPRAPRALPY VSIGRTNYPR DSKTIIKKRT NIKTYGLGPR FGGvftsnvk iinyhlmtpd dhlnlvapyp nrdlavvatg AHGAETIPHC NCTsgvyysr yyrkfypiic erptniwieg ssyypsryqa gvmkgvgpae pgdcggilrc ihgpigllta ggggyvcfad irqldfiade qglgdyitsl grafgtgftd qisakvcelq dvakdflttk vlskvvkmis alviicrnhd dlvtvtatla llgcdgspwr flkmyiskhf qvpyierqan dgwfrkfnda cnaakglewi ankiskliew iknkvlpqar eklefcsklk qldilerqia SIHDSNPTQE Kreqlfnnvl wleqmsqkfs plyaseakri rdlknkitny mQFKSKQRTE PvcvlihGTP GSGKSlttsi vgralaehfn ssvyslppdp khfdgyqqqe vvimddlnqn pdgqdismfc qmvssvdflp pmasldnkgm lftsnfvlas TNSNTLSPPT ilnpealirr fgfdldicmh stytkngkln aamatslckd chqpsnfkkc cplvcgkais lvdrvsnvrf sidqlvtaii ndyknkvkit dslevlfqgp vykdleidic ntpppecisd llksvdseev reycKKKKWI IPQISTnier avnqasmiin tilmfvstlg ivyviyklfa qtqgpysgnp vhnklkpptl kpvvvqgpnt efalsllrkn iltittekge ftslgihdri cvlpthaqpg dnvlvngqki qIKDKYKLVD PDNTnlelTI IELDRNEKFr dirgfisedl egldatlvvh sngftntild vgpitmagli nlsntpttrm irydyptktg qcggvlcttg kifgihvggn grrgfsaqlk kqyfvekqGL IVSKQKVRDI GLNPINTPTK TKLHpsvfyn vfpgskqpav lndndprlev klaeslfsky kgnvqmepte nmliavdhya gqlmsldist keltlkealy gvDGLEPIDV TTSAGYPYVS LGIKKRDILN KEtqdvekmk FYLDKYGIDL PlvtyikdeL RSVDKVRLGK SRLIEASSLN DSVnmrmklg nlykafhqnp giitesavgc dpdvfwsvip clmdghlmaf dysnfdasls pvwfeclekv lnklgfkqps liqsicnthh ifrdeiyrve ggmpsgcsgt sifnsminni iirtlilday kgidldslri laygddlivs ypfeldsnil aaigknyglt itppdksdaf tkitwenitf lkryfrpdpq fpflihpvmp mqdiyesirw trdprntqdh vrslcmlawh sgekdyndfi tkirTTDIGK CLNLPEYSVL RRRWLDLF
>Q82081_REM465
1-14, 37-49, 348-358, 584-597
MGAQVSTQKS GSHEnqnilt ngsnqtftvi nyykdaASSS SAGQSFSMDp skftepvkdl mlkgapalns pnveacgysd rvqqitlgns tittqeaana ivcyaewpey lsdndasdvn ktskpdisvc rfytldsktw katskgwcwk lpdalkdmgv fgqnmfyhsl grtgytihvq cnatkfhsgc llvvvipehq lasheggtvs vkykythpgd rgidldtvev aggptsdaiy nmdgtllgnl lifphqfinl rtnntativv pyinsvpids mtrhnnvslm vvpiaplnap tgssptlpvt vtiapmctef tgirsrsivp qglptttlpg sgqflttDDR QSPSALPSye ptprihipgk vrnlleiiqv gtlipmnntg tndnvtnyli plhadrqneq ifgtklyigd gvfkttllge iaqyythwsg slrislmytg palssakiil aytppgtrgp edrkeamlgt hvvwdiglqs tivmtipwts gvqfrytdpd tytsagylsc wyqtslilpp qtsgqvylls fisacpdfkl rlmkdtqtis qtdaltegls deleevivek tkqTLASVSS GPKHTQSvpa ltanetgatl ptrpsdnvet rttymhfngs etdvesflgr aacvhvteik nknaagldnh rkeglfndwk inlsslvqlr kklelftyvr fdseytilat asqpeassys snltvqamyv ppgapnpkew ddytwqsasn psvffkvget srfsvpfvgi asayncfydg yshddpdtpy gitvlnhmgs mafrvvnehd vhttivkirv yhrakhveaw iprapralpy vsigrtnypr dsktiikkrt niktyglgpr fggvftsnvk iinyhlmtpd dhlnlvapyp nrdlavvatg ahgaetiphc nctsgvyysr yyrkfypiic erptniwieg ssyypsryqa gvmkgvgpae pgdcggilrc ihgpigllta ggggyvcfad irqldfiade qglgdyitsl grafgtgftd qisakvcelq dvakdflttk vlskvvkmis alviicrnhd dlvtvtatla llgcdgspwr flkmyiskhf qvpyierqan dgwfrkfnda cnaakglewi ankiskliew iknkvlpqar eklefcsklk qldilerqia sihdsnptqe kreqlfnnvl wleqmsqkfs plyaseakri rdlknkitny mqfkskqrte pvcvlihgtp gsgkslttsi vgralaehfn ssvyslppdp khfdgyqqqe vvimddlnqn pdgqdismfc qmvssvdflp pmasldnkgm lftsnfvlas tnsntlsppt ilnpealirr fgfdldicmh stytkngkln aamatslckd chqpsnfkkc cplvcgkais lvdrvsnvrf sidqlvtaii ndyknkvkit dslevlfqgp vykdleidic ntpppecisd llksvdseev reyckkkkwi ipqistnier avnqasmiin tilmfvstlg ivyviyklfa qtqgpysgnp vhnklkpptl kpvvvqgpnt efalsllrkn iltittekge ftslgihdri cvlpthaqpg dnvlvngqki qikdkyklvd pdntnlelti ieldrnekfr dirgfisedl egldatlvvh sngftntild vgpitmagli nlsntpttrm irydyptktg qcggvlcttg kifgihvggn grrgfsaqlk kqyfvekqgl ivskqkvrdi glnpintptk tklhpsvfyn vfpgskqpav lndndprlev klaeslfsky kgnvqmepte nmliavdhya gqlmsldist keltlkealy gvdglepidv ttsagypyvs lgikkrdiln ketqdvekmk fyldkygidl plvtyikdel rsvdkvrlgk srlieassln dsvnmrmklg nlykafhqnp giitesavgc dpdvfwsvip clmdghlmaf dysnfdasls pvwfeclekv lnklgfkqps liqsicnthh ifrdeiyrve ggmpsgcsgt sifnsminni iirtlilday kgidldslri laygddlivs ypfeldsnil aaigknyglt itppdksdaf tkitwenitf lkryfrpdpq fpflihpvmp mqdiyesirw trdprntqdh vrslcmlawh sgekdyndfi tkirttdigk clnlpeysvl rrrwldlf
| JOB-ID | Q82081_212428ZwrpDH8AAQEAAGAHwCYAAABT |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q82081 |
| Description | sp|Q82081|POLG_HRV3 Genome polyprotein OS=Human rhinovirus 3 OX=44130 PE=1 SV=4 |
| Title/ID | none |
| Sequence length | 2178 |
| Download predictions | smoothed scores raw scores |