Download PostScript file
>Q82446_LOOPS
1-8, 15-36, 41-57, 70-81, 88-99, 108-128, 147-155, 160-242, 254-264, 272-288, 306-320, 334-348, 359-430, 439-446, 455-465, 486-507, 527-536, 559-584, 596-717, 760-771, 782-796
MASKSDKQvt vevnNNGRNR SKSRARSQSR GRGRSVkitv NSHNKGRRQN GRNKYQSnqr vrkivnkqlR KQGVTGPKPA IcqrataTLG TIGTNTTGAt eieacilLNP VLVKDATGST QFGPVQALga qysmwklkyl nvkltsMVGA SAVNGtvlrI SLNPTSTPSS TSWSGLGARK HMDVTVGRNA VFKLRPSDLG GPRDGWWLTN TNDNASDTLG PSIEIHTLGK TMSSYKNEQF TGglflvela sewCFTGYAA NPNLvnlvks tDHEVNVTFE GSKGTPLImn vaehshfarm aeqhsSISTT FSRAGGDATS dtvwqvlnta vsaAELVAPP PFNWLIKGgw wfvkliagRT RTGTKQFYVY PSYQDALSNK PALCTGGVTG GVLRTTPVTT LQFTQMNQPS LGHGEHTATI GSIVQDPSGE lrvlltvgSI MSPNSAdrqv wlnkTLTAPG TNSNDnlvki ahdlghylim qgfmhIKTVE WYTPDFQPSR DPTPIAGmsv mvnitkkadv yfmkqfKNSY TNNRHQitsi flikpladfk vqcymsyfKR ESHDNDGVAN LTVRSMTSPE TIRFqvgewy lltstTLKEN NLPEGWVWDR VELKSDTPYY ADQALTYFIT PPPVDSQILF EGNTTLPRIS SPPDNPSGRY MESHQQDCDS SDDEDDCENV SEETETEDEE DEDEDDEADR FDLHSPYSSE PEDSDENnrv tllstlinqg mtveratrit krafptcaek lkrsvymdlL ASGASPSSAW Snacdearnv gSNQLAKLSG DRGHAE
>Q82446_HOTLOOPS
1-62, 67-81, 159-183, 193-205, 457-465, 560-570, 596-606, 682-700, 705-718, 726-749, 783-796
MASKSDKQVT VEVNNNGRNR SKSRARSQSR GRGRSVKITV NSHNKGRRQN GRNKYQSNQR VRkivnKQLR KQGVTGPKPA Icqratatlg tigtnttgat eieacillnp vlvkdatgst qfgpvqalga qysmwklkyl nvkltsmvga savngtvlRI SLNPTSTPSS TSWSGLGARK HMDvtvgrna vfKLRPSDLG GPRDGwwltn tndnasdtlg psieihtlgk tmssykneqf tgglflvela sewcftgyaa npnlvnlvks tdhevnvtfe gskgtplimn vaehshfarm aeqhssistt fsraggdats dtvwqvlnta vsaaelvapp pfnwlikggw wfvkliagrt rtgtkqfyvy psyqdalsnk palctggvtg gvlrttpvtt lqftqmnqps lghgehtati gsivqdpsge lrvlltvgsi mspnsadrqv wlnktlTAPG TNSNDnlvki ahdlghylim qgfmhiktve wytpdfqpsr dptpiagmsv mvnitkkadv yfmkqfknsy tnnrhqitsi flikpladfk vqcymsyfkR ESHDNDGVAN ltvrsmtspe tirfqvgewy lltstTLKEN NLPEGWvwdr velksdtpyy adqaltyfit pppvdsqilf egnttlpris sppdnpsgry meshqqdcds sddeddcenv sEETETEDEE DEDEDDEADR fdlhSPYSSE PEDSDENNrv tllstLINQG MTVERATRIT KRAFPTCAEk lkrsvymdll asgaspssaw snacdearnv gsNQLAKLSG DRGHAE
>Q82446_REM465
1-11, 18-34, 165-176, 654-699, 707-716, 762-771, 787-796
MASKSDKQVT VevnnngRNR SKSRARSQSR GRGRsvkitv nshnkgrrqn grnkyqsnqr vrkivnkqlr kqgvtgpkpa icqratatlg tigtnttgat eieacillnp vlvkdatgst qfgpvqalga qysmwklkyl nvkltsmvga savngtvlri slnpTSTPSS TSWSGLgark hmdvtvgrna vfklrpsdlg gprdgwwltn tndnasdtlg psieihtlgk tmssykneqf tgglflvela sewcftgyaa npnlvnlvks tdhevnvtfe gskgtplimn vaehshfarm aeqhssistt fsraggdats dtvwqvlnta vsaaelvapp pfnwlikggw wfvkliagrt rtgtkqfyvy psyqdalsnk palctggvtg gvlrttpvtt lqftqmnqps lghgehtati gsivqdpsge lrvlltvgsi mspnsadrqv wlnktltapg tnsndnlvki ahdlghylim qgfmhiktve wytpdfqpsr dptpiagmsv mvnitkkadv yfmkqfknsy tnnrhqitsi flikpladfk vqcymsyfkr eshdndgvan ltvrsmtspe tirfqvgewy lltsttlken nlpegwvwdr velksdtpyy adqaltyfit pppvdsqilf egnttlpris sppDNPSGRY MESHQQDCDS SDDEDDCENV SEETETEDEE DEDEDDEADr fdlhspYSSE PEDSDEnnrv tllstlinqg mtveratrit krafptcaek lkrsvymdll aSGASPSSAW Snacdearnv gsnqlaKLSG DRGHAE
| JOB-ID | Q82446_231104Zz@@CH8AAQEAAGD0qdAAAAAT |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q82446 |
| Description | sp|Q82446|CAPSD_HASV2 Capsid polyprotein VP90 OS=Human astrovirus-2 OX=12701 GN=ORF2 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 796 |
| Download predictions | smoothed scores raw scores |