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>Q82452_LOOPS
14-36, 43-58, 70-80, 87-100, 109-128, 147-242, 254-264, 270-297, 303-321, 334-348, 358-431, 438-469, 474-505, 528-535, 558-619, 626-634, 643-706, 732-742, 751-760, 771-786
masksnkqvt vevSNNGRSR SKSRARSQSR GRDKSVkitv nsRNRARRQP GRDKRQSSqr vrnivnkqlR KQGVTGPKPA icqratATLG TVGSNTSGTT eieacillNP VLVKDATGST QFGPVQALga qysmwklkyl nvkltsMVGA SAVNGTVSGV SLNPTTTPTS TSWSGLGARK HLDVTVGKNA TFKLKPSDLG GPRDGWWLTN TNDNASDTLG PSIEIHTLGR TMSSYKNEQF TGglflvela sewCFTGYAA NPNLvnlvkS TDNQVSVTFE GSAGSPLIMN VPEGSHFart vlARSTTPTT LARAGERTTS Dtvwqvlnta vsaAELVTPP PFNWLVKGgw wfvkliaGRT RTGSRSFYVY PSYQDALSNK PALCTGSTPG GMRTRNPVTT TLQFTQMNQP SLGHGEAPAA FGRSIPAPGE EfkvvltFGA PMSPNANNKQ TWVNKPLDAP SGHYNVKIAk dvdHYLTMQG FTSIASVDWY TIDFQPSEAP APIQGlqvlv nsskkadvya ikqfvtaQTN NKHQVtslfl vkvttgfqvn nylsyfyRAS ATGDATTNLL VRGDTYTAGI SFTQGGWYLL TNTSIVDGAM PPGWVWNNVE LKTNTAYHMd kglvhLIMPL PESTqmcyem ltSIPRSRAS GHGYESDNTE YLDAPDSADQ FKEDIETDTD IESTEDEDEA DRFDIIDTSD EEDENEtdrv tllstlvnqg mtmtratria rRAFPTLSDR IKrgvymdll VSGASPGNAW shaceearka AGEINPCTSG SRGHAE
>Q82452_HOTLOOPS
1-80, 88-97, 156-179, 189-203, 212-220, 306-322, 334-347, 526-534, 676-709, 715-742, 772-786
MASKSNKQVT VEVSNNGRSR SKSRARSQSR GRDKSVKITV NSRNRARRQP GRDKRQSSQR VRNIVNKQLR KQGVTGPKPA icqrataTLG TVGSNTSgtt eieacillnp vlvkdatgst qfgpvqalga qysmwklkyl nvkltsmvga savngTVSGV SLNPTTTPTS TSWSGLGARk hldvtvgkNA TFKLKPSDLG GPRdgwwltn tNDNASDTLG psieihtlgr tmssykneqf tgglflvela sewcftgyaa npnlvnlvks tdnqvsvtfe gsagsplimn vpegshfart vlarsTTPTT LARAGERTTS DTvwqvlnta vsaAELVTPP PFNWLVKggw wfvkliagrt rtgsrsfyvy psyqdalsnk palctgstpg gmrtrnpvtt tlqftqmnqp slghgeapaa fgrsipapge efkvvltfga pmspnannkq twvnkpldap sghynvkiak dvdhyltmqg ftsiasvdwy tidfqpseap apiqglqvlv nsskkadvya ikqfvTAQTN NKHQvtslfl vkvttgfqvn nylsyfyras atgdattnll vrgdtytagi sftqggwyll tntsivdgam ppgwvwnnve lktntayhmd kglvhlimpl pestqmcyem ltsiprsras ghgyesdnte yldapdsadq fkediETDTD IESTEDEDEA DRFDIIDTSD EEDENETDRv tllsTLVNQG MTMTRATRIA RRAFPTLSDR IKrgvymdll vsgaspgnaw shaceearka aGEINPCTSG SRGHAE
>Q82452_REM465
1-35, 44-60, 166-175, 676-688, 778-786
MASKSNKQVT VEVSNNGRSR SKSRARSQSR GRDKSvkitv nsrNRARRQP GRDKRQSSQR vrnivnkqlr kqgvtgpkpa icqratatlg tvgsntsgtt eieacillnp vlvkdatgst qfgpvqalga qysmwklkyl nvkltsmvga savngtvsgv slnptTTPTS TSWSGlgark hldvtvgkna tfklkpsdlg gprdgwwltn tndnasdtlg psieihtlgr tmssykneqf tgglflvela sewcftgyaa npnlvnlvks tdnqvsvtfe gsagsplimn vpegshfart vlarsttptt laragertts dtvwqvlnta vsaaelvtpp pfnwlvkggw wfvkliagrt rtgsrsfyvy psyqdalsnk palctgstpg gmrtrnpvtt tlqftqmnqp slghgeapaa fgrsipapge efkvvltfga pmspnannkq twvnkpldap sghynvkiak dvdhyltmqg ftsiasvdwy tidfqpseap apiqglqvlv nsskkadvya ikqfvtaqtn nkhqvtslfl vkvttgfqvn nylsyfyras atgdattnll vrgdtytagi sftqggwyll tntsivdgam ppgwvwnnve lktntayhmd kglvhlimpl pestqmcyem ltsiprsras ghgyesdnte yldapdsadq fkediETDTD IESTEDEDea drfdiidtsd eedenetdrv tllstlvnqg mtmtratria rrafptlsdr ikrgvymdll vsgaspgnaw shaceearka ageinpcTSG SRGHAE
| JOB-ID | Q82452_230854Zz@9hn8AAQEAAGD16CMAAABL |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q82452 |
| Description | sp|O12792|CAPSD_HASV1 Capsid polyprotein VP90 OS=Human astrovirus-1 OX=12456 GN=ORF2 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 786 |
| Download predictions | smoothed scores raw scores |