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>Q88894_LOOPS
1-32, 41-140, 166-190, 200-209, 215-225, 238-247, 260-290, 300-330, 338-388, 418-447, 454-481, 501-515
MCAVTVVPDP TCCGTLSFKV PKDAKKGKHL GTfdirqaim DYGGLHSQEW CAKGIVNPTF TVRMHAPRNA FAGLSIACTF DDYKRIDLPA LGNECPPSEM FELPTKVFML KDADVHEWQF NYGELTGHGL CNWANVATQP tlyffvastn qvtmaadwqc ivtmhVDMGP VIDRFELNPT MTWPIQLGDT faidryyeaK EIKLDGSTSm lsisYNFGGP VKHSKkhais ysravmsRNL GWSGTISgsv ksvsslfctA SFVIFPWECE APPTLRQVLW GPHQIMHGDG qfeiaiktrL HSAATTEEGF GRLGILPLSG PIAPDAHVGS yefivhiNTW RPDSQVHPPM FSSSELYNWF TLTNLKPDAN TGVVNFDIPG YIHDFASKda tvtlasnpls wlvaatgwhy gevdlciSWS RSKQAQAQEG SVSITTNYRD WGAYWQGqar iydLRRTEAE IPIFLGSYAG ATPSGALGKQ Nyvrisivna kdivalrvcl RPKSIKFWGR SATLF
>Q88894_HOTLOOPS
1-28, 427-444, 500-515
MCAVTVVPDP TCCGTLSFKV PKDAKKGKhl gtfdirqaim dygglhsqew cakgivnptf tvrmhaprna faglsiactf ddykridlpa lgnecppsem felptkvfml kdadvhewqf nygeltghgl cnwanvatqp tlyffvastn qvtmaadwqc ivtmhvdmgp vidrfelnpt mtwpiqlgdt faidryyeak eikldgstsm lsisynfggp vkhskkhais ysravmsrnl gwsgtisgsv ksvsslfcta sfvifpwece apptlrqvlw gphqimhgdg qfeiaiktrl hsaatteegf grlgilplsg piapdahvgs yefivhintw rpdsqvhppm fssselynwf tltnlkpdan tgvvnfdipg yihdfaskda tvtlasnpls wlvaatgwhy gevdlcisws rskqaqAQEG SVSITTNYRD WGAYwqgqar iydlrrteae ipiflgsyag atpsgalgkq nyvrisivna kdivalrvcL RPKSIKFWGR SATLF
>Q88894_REM465
422-431
mcavtvvpdp tccgtlsfkv pkdakkgkhl gtfdirqaim dygglhsqew cakgivnptf tvrmhaprna faglsiactf ddykridlpa lgnecppsem felptkvfml kdadvhewqf nygeltghgl cnwanvatqp tlyffvastn qvtmaadwqc ivtmhvdmgp vidrfelnpt mtwpiqlgdt faidryyeak eikldgstsm lsisynfggp vkhskkhais ysravmsrnl gwsgtisgsv ksvsslfcta sfvifpwece apptlrqvlw gphqimhgdg qfeiaiktrl hsaatteegf grlgilplsg piapdahvgs yefivhintw rpdsqvhppm fssselynwf tltnlkpdan tgvvnfdipg yihdfaskda tvtlasnpls wlvaatgwhy gevdlcisws rSKQAQAQEG Svsittnyrd wgaywqgqar iydlrrteae ipiflgsyag atpsgalgkq nyvrisivna kdivalrvcl rpksikfwgr satlf
| JOB-ID | Q88894_085535ZulEB38AAQEAADCSKSkAAAAE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q88894 |
| Description | sp|Q88894|CAPSD_TRSV Capsid protein OS=Tobacco ringspot virus OX=12282 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 515 |
| Download predictions | smoothed scores raw scores |