Download PostScript file
>Q98776_LOOPS
1-50, 57-70, 81-89, 97-121, 133-148, 186-213, 275-285, 302-332, 353-365, 404-475, 481-492, 515-525, 561-572, 585-595, 607-635, 648-668, 673-686, 755-784, 796-809, 861-872, 879-891, 898-908, 927-936, 945-963, 1004-1024, 1062-1175, 1205-1241, 1282-1293, 1304-1323, 1330-1360, 1372-1397, 1423-1432, 1442-1482, 1496-1503, 1512-1525, 1533-1542, 1555-1563, 1588-1650, 1658-1676, 1698-1741, 1764-1777, 1802-1819, 1844-1854, 1880-1898, 1916-1927, 1943-1964, 1996-2034, 2047-2054, 2065-2075, 2100-2109
MEVHDFETDE FNDFNEDDYA TREFLNPDER MTYLNHADYN LNSPLISDDI dnlirkFNSL PIPSMWDSKN wdgvlemlts CQANPISTSq mhkwmgSWLM SDNHDASQGY SFLHEVDKEA Eitfdvvetf irGWGNKPIE YIKKERWTds fkilaylcqk fldlhkltli lnavsevell nlartFKGKV RRSSHGTNIC RIRVPSLGPT FISegwayfk kldilmdrnf llmvkdviig rmqtvlsmvc ridnlfseqd ifsllniyri gdkiVERQGN FSYDLikmve picnlklmkl aRESRPLVPQ FPHFENHIKT SVDEGAKIDR GIrflhdqim svktvdltlv iyGSFRHWGH PFIDYytgle klhsqvtmkk didvsyakal asdlarivlf qqfNDHKKWF VNGDLLPHDH PFKSHVKENT WPTAAQVQDF GDKWHELPLI KCFEIPDLLD PSIIYSDKSH SMNRSevlkh VRMNPNTPIP SKkvlqtmld tkatnwkefl keidEKGLDD DDLIIglkgk erelklagrf fslmswklre yfviteylik THFVPMFKGL TMaddltavi kkmlDSSSGQ GLKSYeaici anhidyEKWN NHQRKLSNGP VFRVMGQFLG YPSLIerthe ffeksliYYN GRPDLMRVHN NTLINSTSqr vcWQGQEGGL EGLRQKgwti lnllviqrea kirntavkvl aqgdnqvict qyktkksrnv velqgalnqm vsnnekimta ikigTGKLGL LINDDETMQS ADYLNYGKIP IFRGvirgle tkrwsRVTCV TNDQIPTCAn imssvstnal tvahfaenpi namiqynyfg tfarlllmmh dpalrqslye VQDKIPGLHS STfkyamlYL DPSIGGVSGM SlsrfliRAF PDPVTESLsf wrfihvhars ehlkemSAVF GNPEIAkfri thidKLVEDP TSLNIAMGMS PANllktevk kcliesrqti rnqvikdati ylyheedrlr sflWSINPLF PRFLSEFKSG TFLGvadgli slfqnsrtir nsfkkkyhre lddlivrsev sSLTHLGKLH LRRGSCKMWT CSATHADTLR YKSWGRTVIG TTVPHPLEML GPQHRKETPC APCNTSGFNY VSVHCPDGIH DVFSSRGPLP AYLGSKTSES TSILQPWERE SKVPLikrat rlrdaiswfv epdsklamti lsniHSLTGE EWTKRQHGFK RTGSALHRFS TSRMSHGGFA Sqstaaltrl mattdtmrdl gdqnfdflfq atllyaqitt tVARDGWITS CTDhyhiack sclRPIEEIT LDSSMDYTPP DVShvlktwR NGEGSWGQEI KQIYPLEGNW KNLAPAEQSY qvgrcigfly gDLAYRKSTH AEDSSLFPLS IQGRIRGrgf lkglldglmr asccqvihrr slAHLKRPAN AVyggliyli dKLSVSPPFL SLTRSGPIRD ELETIPHKIP TSYPTSNRDM GVivrnyfky qcrliEKGKY RSHysqlwlf sDVLSIDFIG PFSISttllq ilYKPFLSGK DKnelrelan lsslLRSGEG WEDihvkfft kdillcpeei rhackfgIAK DNNKDMSYPP WGRESRGTIT TIPVYYTTTP YPKMLEMPPR IQNPLLSGIR LGQLPTGAHY kirsilhGMG IHYRDFLSCG DGSGGMtaal lrenvhsrgi fnsllelSGS VMRGASPEPP SALETLGGDK SRCVNGETCW EYPSDLCDPR Twdyflrlka glglqidliv mdmEVRDSST SLKIETNvrn yvhrildeqg vliyktygty iCESEKNAVT ILGPMFKTVd lvqtefsssq tsevymvckg lkkLIDEPNP DWSSineswk nlyafqsseq efarakkvsT YFTLTGIPSQ FIPDPFVNie tmlqifgvpt gvshaAALKS SDRPADLlti slfymaiisy ynINHIRVGP IPPNPPSDGI AQNVgiaitg isfwlslmek diplyqqcla viqqsFPIRW EAVSVKGGYK QKWSTRGDGL PKDTRISDSL APIGnwirsl elvrnqVRLN PFNEilfnql crtvDNHLKW SNLRRntgmi ewinrriske drsilmlksD LHEENSWRD
>Q98776_HOTLOOPS
1-21, 130-146, 184-212, 309-325, 480-495, 512-523, 708-729, 1058-1079, 1085-1096, 1157-1177, 1188-1196, 1232-1241, 1381-1396, 1420-1429, 1454-1482, 1586-1613, 1769-1790, 1826-1833, 2002-2032, 2065-2109
MEVHDFETDE FNDFNEDDYA Treflnpder mtylnhadyn lnsplisddi dnlirkfnsl pipsmwdskn wdgvlemlts cqanpistsq mhkwmgswlm sdnhdasqgy sflhevdkea eitfdvvetF IRGWGNKPIE YIKKERwtds fkilaylcqk fldlhkltli lnavsevell nlaRTFKGKV RRSSHGTNIC RIRVPSLGPT FIsegwayfk kldilmdrnf llmvkdviig rmqtvlsmvc ridnlfseqd ifsllniyri gdkiverqgn fsydlikmve picnlklmkl aresrplvPQ FPHFENHIKT SVDEGakidr girflhdqim svktvdltlv iygsfrhwgh pfidyytgle klhsqvtmkk didvsyakal asdlarivlf qqfndhkkwf vngdllphdh pfkshvkent wptaaqvqdf gdkwhelpli kcfeipdlld psiiysdksh smnrsevlkH VRMNPNTPIP SKKVLqtmld tkatnwkefl kEIDEKGLDD DDLiiglkgk erelklagrf fslmswklre yfviteylik thfvpmfkgl tmaddltavi kkmldsssgq glksyeaici anhidyekwn nhqrklsngp vfrvmgqflg ypslierthe ffeksliyyn grpdlmrvhn ntlinstsqr vcwqgqeggl eglrqkgwti lnllviqrea kirntavKVL AQGDNQVICT QYKTKKSRNv velqgalnqm vsnnekimta ikigtgklgl linddetmqs adylnygkip ifrgvirgle tkrwsrvtcv tndqiptcan imssvstnal tvahfaenpi namiqynyfg tfarlllmmh dpalrqslye vqdkipglhs stfkyamlyl dpsiggvsgm slsrfliraf pdpvteslsf wrfihvhars ehlkemsavf gnpeiakfri thidklvedp tslniamgms panllktevk kcliesrqti rnqvikdati ylyheedrlr sflwsinplf prflsefksg tflgvadgli slfqnsrtir nsfkkkyhre lddlivrSEV SSLTHLGKLH LRRGSCKMWt csatHADTLR YKSWGRtvig ttvphpleml gpqhrketpc apcntsgfny vsvhcpdgih dvfssrgplp aylgskTSES TSILQPWERE SKVPLIKrat rlrdaisWFV EPDSKLamti lsnihsltge ewtkrqhgfk rtgsalhrfs tSRMSHGGFA Sqstaaltrl mattdtmrdl gdqnfdflfq atllyaqitt tvardgwits ctdhyhiack sclrpieeit ldssmdytpp dvshvlktwr ngegswgqei kqiyplegnw knlapaeqsy qvgrcigfly gdlayrksth AEDSSLFPLS IQGRIRgrgf lkglldglmr asccqvihrR SLAHLKRPAn avyggliyli dklsvsppfl sltRSGPIRD ELETIPHKIP TSYPTSNRDM GVivrnyfky qcrliekgky rshysqlwlf sdvlsidfig pfsisttllq ilykpflsgk dknelrelan lssllrsgeg wedihvkfft kdillcpeei rhackFGIAK DNNKDMSYPP WGRESRGTIT TIPvyytttp ypkmlemppr iqnpllsgir lgqlptgahy kirsilhgmg ihyrdflscg dgsggmtaal lrenvhsrgi fnsllelsgs vmrgaspepp saletlggdk srcvngetcw eypsdlcdpr twdyflrlka glglqidliv mdmevrdsST SLKIETNVRN YVHRILDEQG vliyktygty iceseknavt ilgpmfktvd lvqteFSSSQ TSEvymvckg lkklidepnp dwssineswk nlyafqsseq efarakkvst yftltgipsq fipdpfvnie tmlqifgvpt gvshaaalks sdrpadllti slfymaiisy yninhirvgp ippnppsdgi aqnvgiaitg isfwlslmek diplyqqcla viqqsfpirw eAVSVKGGYK QKWSTRGDGL PKDTRISDSL APignwirsl elvrnqvrln pfneilfnql crtvDNHLKW SNLRRNTGMI EWINRRISKE DRSILMLKSD LHEENSWRD
>Q98776_REM465
188-195, 2101-2109
mevhdfetde fndfneddya treflnpder mtylnhadyn lnsplisddi dnlirkfnsl pipsmwdskn wdgvlemlts cqanpistsq mhkwmgswlm sdnhdasqgy sflhevdkea eitfdvvetf irgwgnkpie yikkerwtds fkilaylcqk fldlhkltli lnavsevell nlartfkGKV RRSSHgtnic rirvpslgpt fisegwayfk kldilmdrnf llmvkdviig rmqtvlsmvc ridnlfseqd ifsllniyri gdkiverqgn fsydlikmve picnlklmkl aresrplvpq fphfenhikt svdegakidr girflhdqim svktvdltlv iygsfrhwgh pfidyytgle klhsqvtmkk didvsyakal asdlarivlf qqfndhkkwf vngdllphdh pfkshvkent wptaaqvqdf gdkwhelpli kcfeipdlld psiiysdksh smnrsevlkh vrmnpntpip skkvlqtmld tkatnwkefl keidekgldd ddliiglkgk erelklagrf fslmswklre yfviteylik thfvpmfkgl tmaddltavi kkmldsssgq glksyeaici anhidyekwn nhqrklsngp vfrvmgqflg ypslierthe ffeksliyyn grpdlmrvhn ntlinstsqr vcwqgqeggl eglrqkgwti lnllviqrea kirntavkvl aqgdnqvict qyktkksrnv velqgalnqm vsnnekimta ikigtgklgl linddetmqs adylnygkip ifrgvirgle tkrwsrvtcv tndqiptcan imssvstnal tvahfaenpi namiqynyfg tfarlllmmh dpalrqslye vqdkipglhs stfkyamlyl dpsiggvsgm slsrfliraf pdpvteslsf wrfihvhars ehlkemsavf gnpeiakfri thidklvedp tslniamgms panllktevk kcliesrqti rnqvikdati ylyheedrlr sflwsinplf prflsefksg tflgvadgli slfqnsrtir nsfkkkyhre lddlivrsev sslthlgklh lrrgsckmwt csathadtlr ykswgrtvig ttvphpleml gpqhrketpc apcntsgfny vsvhcpdgih dvfssrgplp aylgsktses tsilqpwere skvplikrat rlrdaiswfv epdsklamti lsnihsltge ewtkrqhgfk rtgsalhrfs tsrmshggfa sqstaaltrl mattdtmrdl gdqnfdflfq atllyaqitt tvardgwits ctdhyhiack sclrpieeit ldssmdytpp dvshvlktwr ngegswgqei kqiyplegnw knlapaeqsy qvgrcigfly gdlayrksth aedsslfpls iqgrirgrgf lkglldglmr asccqvihrr slahlkrpan avyggliyli dklsvsppfl sltrsgpird eletiphkip tsyptsnrdm gvivrnyfky qcrliekgky rshysqlwlf sdvlsidfig pfsisttllq ilykpflsgk dknelrelan lssllrsgeg wedihvkfft kdillcpeei rhackfgiak dnnkdmsypp wgresrgtit tipvyytttp ypkmlemppr iqnpllsgir lgqlptgahy kirsilhgmg ihyrdflscg dgsggmtaal lrenvhsrgi fnsllelsgs vmrgaspepp saletlggdk srcvngetcw eypsdlcdpr twdyflrlka glglqidliv mdmevrdsst slkietnvrn yvhrildeqg vliyktygty iceseknavt ilgpmfktvd lvqtefsssq tsevymvckg lkklidepnp dwssineswk nlyafqsseq efarakkvst yftltgipsq fipdpfvnie tmlqifgvpt gvshaaalks sdrpadllti slfymaiisy yninhirvgp ippnppsdgi aqnvgiaitg isfwlslmek diplyqqcla viqqsfpirw eavsvkggyk qkwstrgdgl pkdtrisdsl apignwirsl elvrnqvrln pfneilfnql crtvdnhlkw snlrrntgmi ewinrriske drsilmlksd LHEENSWRD
| JOB-ID | Q98776_060610Z7q60n8AAQEAAFgY0zgAAAAE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q98776 |
| Description | sp|Q98776|L_VSIVM RNA-directed RNA polymerase L OS=Vesicular stomatitis Indiana virus (strain Mudd-Summers) OX=11279 GN=L PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2109 |
| Download predictions | smoothed scores raw scores |