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>Q99DQ9_LOOPS
1-11, 19-27, 55-65, 100-110, 142-239, 271-278, 291-312, 322-336, 355-432, 439-493, 512-526, 571-582, 590-613, 620-652, 664-698, 714-727, 792-817, 880-899, 917-953, 968-980, 1010-1137, 1145-1156, 1289-1299, 1350-1359, 1365-1378, 1394-1403, 1438-1467, 1479-1489, 1500-1525, 1559-1599, 1605-1666, 1671-1689, 1696-1707, 1742-1761, 1771-1800, 1819-1851, 1893-1908, 1917-1992, 2001-2031, 2058-2082, 2091-2103, 2134-2142, 2219-2227, 2241-2253, 2287-2323, 2345-2365, 2425-2443, 2458-2467, 2481-2509, 2518-2535, 2569-2585, 2596-2613, 2628-2647, 2653-2685, 2697-2708, 2730-2746, 2770-2801, 2819-2847, 2870-2900, 2916-2925, 2947-2961, 2969-2976, 2981-3000, 3019-3042, 3053-3074, 3109-3118, 3125-3132, 3155-3172, 3190-3203, 3224-3244, 3251-3287, 3314-3338, 3353-3388
MTKKPGGPGK NrainmlkRG LPRVFPLvgv krvvmslldg rgpvrfvlal itffKFTALA PTKALsgrwk aveksvamkh ltsfkrelgt lidavnkrgR KQNKRGGNEG simwlaslav viacagamkl snfqgkllmt iNNTDIADVI VIPTSKGENR CWVRAIDVGY MCEDTITYEC PKLTMGNDPE DVDCWCDNQE VYVQYGRCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLd stkatrylmk tenwiirnpg yaflaavlgw MLGSNNGQrv vftillllva PAYSFNCLGM GNRDFIEGAS GAtwvdlvle gDSCLTIMAN DKPTLDvrmi nieasqlaev rsycYHASVT DISTVARCPT TGEAHNEKRA DSSYVCKQGF TDRGWGNGCG FFGKGSIDTC AKFSCTSKAI GRTIQPENIK YKvgifvhGT TTSENHGNYS AQVGASQAAK FTVTPNAPSV ALKLGDYGEV TLDCEPRSGL NTEafyvmtv gsksflvhre wFHDLALPWT SPSSTAwrnr ellmefegah atkqsvvalg sqegglhhal agaivveyss SVMLTSGHLK CRlkmdklaL KGTTYGMCTE KFSFAKNPVD TGHgtvvieL SYSGSDGPCK IPIVSVASLN DMTPVGRLVT VNpfvatssa nskVLVEMEP PFGDSYIVVG RGDKQINHHW HKAGSTLGka fsttlkgaqr laaLGDTAWD FGSIGGVfns igravhqvfg dafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nVHADTGCAI DITRKEMRCG SGIFVHNdve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdL SVVVNKPVGR YRSAPKRLSm tqekfemgwk awgksiLFAP ELANSTFVVD GPETKECPDE HRAWNSMQIE DFGfgitstr vwlkireEST DECDGAIIGT avkghvavhs dlsywiesry ndtwkleraV FGEVKSCTWP ETHTLWGDDV EESELIIPHT IAGPKSKHNR REGYKTQNQG PWDENGIVLD FDYCPGTKVT ITEDCSKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFRTE NGCWYGMEIR PVMHDETtlv rsqvHAFKGE MVDPFQlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraiTF PTTSSVTMPv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalT STGWFSPTTi aaglMVCNPN KKRGWPATef lsavglmfai vggLAELDIE SMSipfmlag lmavsyvvsg katdmwlera adiswdmGAA ITGSSRRLDV KLDDDGDFHF IDDPGVPwkv wvlrmsciGL AALTPWAIVp aafgywltlK TTKRGGVFWD TPSPKPCSKG DTTTGvyrim argilgtyqa gvgvmyenvf htlwhttrGA AIVSGEGKLT PYWGSVKEDR IAYGGPWRFD RKWNGTDDVq vivvEPGKGA VNIQTKPGVF RTPFGEVGAV SLDYPRGTSG SPILDSNGDI IGLYGNGVEL GDGSYVsaiv QGDRQEEPVP EAYTPNMLRk rqmtvLDLHP GSGKTRKilp qiikdaiqqr lrtavlaptr vvaaemaevl rGLPVRYQTS AVQREHQGNE Ivdvmchatl THRLMSPNRV PNYNLFVMDE AHFTDPASIA argyiatkve lgeaaaifMT ATPPGTTDPF PDSNAPIHDL QDEIPDRAWS Sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrKSYDTEYP KCKNGDWDfv ittdisEMGA NFGASRVIDC RKSVKPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQVGDEYHYG GATSEDDSNL AHwteakiml DNIHMPNGLV AQLYGPEREK AFTMDGEYRL Rgeekknfle llrtadlpvw laykvasNGI QYTDRKWCFD GPRTNAILED NTeveivtrm GERKILKPRW LDArvyadhq alkwfkdfaa gkrsavsfie vlgRMPEHFM GKtrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwAA EVPGTKIagt llialllmvv LIPEPEKQRS QTDnqlavfl icvltvvgvv aaneygmlek tkadlkSMFG GKTQASGLTG LPSMALDLRP ATAWALYGGS TVVltpllkh litseyvtts lasiNSQAGS LFVLPRGVPF TDLDLtvglv flgcwgqvtl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdGMVATD VPELERTTPL MQKkvgqvll igvsvaaFLV NPNVTTVrea gvlvtaatlt LWDNGASAVW NSTTATGLCH VMRGSYLAGg siawtliKNA DKPSLKRGRP GGRTLgeqwk eklnamsree ffkyrregii evdrtearRA RSENNIVGGH PVSRGsaklr wlvekGFVSP IGKVIDLGCG RGGwsyyaat lkkvqevRGY TKGGAGHEEP MLMQSYGwnl vsLKSGVDVF YKPSEPSDTL FCDIGESSPS PEVEEqrtlr vlemtsDWLH RGPREFCIkv lcpympkvie kievlqrrfG GGLVRLPLSR NSNHEMywvs gaagnvvhav nmtsqvllgR MDRTVWRGPK YEEDVNLGSG TRAVGKGEVH Snqekikkri qklkeefaTT WHKDPEHPYR TWTYHGSYEV KATGSASslv ngvvklmskp wdaianvttM AMTDTTPFGQ QRVFKEKVDT KAPEPPAGAK evlnettnwl waylsREKRP RLCTKeefik kvnsnaalga vfaeqnQWST AREAVDDPRF WemvdeerEN HLRGEChtci YNMMGKREKK PGEFGKAKGS raiwfmwlga rylefealGF LNEDHWLSRE NSGGGVEGSG VQklgyilrd iaGKQGGKMY ADDTAGWDTR ITRTdlenea kvlelldgeh rmlaraiiel tyrhkvvkVM RPAAEGKTvm dvisREDQRG SGqvvtyaln tftniavqlv rlmeAEGVIG PQHLEHLPRK NKiavrtwlf engeervtrM AISGDDCAVK PLDdrfatal hflnamskvr kdiQEWKPSH GWHDWQQVPF CSNHfqeivm KDGRSIVVPC RGQDELIGRA RISPGAGWNV KDTACLPkay aqmwvllyfh rrdlrlmana icsAVPVDWV PTGRTSWSIH SKGEWMTTed mlqvwnrvwi eeNEWMMDKT PITSWTDVPY VGKREDIWCG SLIGTRSRat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
>Q99DQ9_HOTLOOPS
1-26, 90-112, 150-163, 206-241, 374-385, 419-431, 516-523, 604-612, 875-902, 1040-1051, 1056-1067, 1080-1117, 1505-1524, 1606-1623, 1671-1689, 1698-1708, 1894-1906, 1921-1930, 1936-1972, 2073-2100, 2517-2540, 2548-2586, 2672-2687, 2695-2703, 2778-2806, 2818-2830, 2892-2905, 2915-2923, 2943-2955, 2967-2976, 3100-3122, 3159-3173, 3267-3279, 3315-3339, 3354-3370, 3419-3432
MTKKPGGPGK NRAINMLKRG LPRVFPlvgv krvvmslldg rgpvrfvlal itffkftala ptkalsgrwk aveksvamkh ltsfkrelgT LIDAVNKRGR KQNKRGGNEG SImwlaslav viacagamkl snfqgkllmt inntdiadvI VIPTSKGENR CWVraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqyGRCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLD Stkatrylmk tenwiirnpg yaflaavlgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt tgeAHNEKRA DSSYVckqgf tdrgwgngcg ffgkgsidtc akfsctskAI GRTIQPENIK Ykvgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsv alklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdlALPWT SPSstawrnr ellmefegah atkqsvvalg sqegglhhal agaivveyss svmltsghlk crlkmdklal kgttygmcte kfsFAKNPVD TGhgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igravhqvfg dafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkENAVDL SVVVNKPVGR YRSAPKRLSM TQekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgddv eeseliiphT IAGPKSKHNR RegykTQNQG PWDENGIvld fdycpgtkvT ITEDCSKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFrte ngcwygmeir pvmhdettlv rsqvhafkge mvdpfqlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswdmgaa itgssrrldv kldddgdfhf iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrGGVFWD TPSPKPCSKG DTTTgvyrim argilgtyqa gvgvmyenvf htlwhttrga aivsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvePGKGA VNIQTKPGVF RTPfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv QGDRQEEPVP EAYTPNMLRk rqmtvldLHP GSGKTRKIlp qiikdaiqqr lrtavlaptr vvaaemaevl rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrkSYDTEYP KCKNGDwdfv ittdisemga NFGASRVIDC rksvkPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gpRTNAILED NTEVEIVTRM GERKILKPRW ldarvyadhq alkwfkdfaa gkrsavsfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqvtl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv npnvttvrea gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlIKNA DKPSLKRGRP GGRTLGEQWK eklnamsREE FFKYRREGII EVDRTEARRA RSENNIVGGH PVSRGSaklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fCDIGESSPS PEVEEQRtlr vlemTSDWLH RGPrefcikv lcpympkvie kievlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrGPK YEEDVNLGSG TRAVGKGEVH SNQEKIkkri qklkeefATT WHKDPEHPYR twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvdt kAPEPPAGAK EVLNEttnwl waylSREKRP RLCtkeefik kvnsnaalga vfAEQNQWST AREAVddprf wemvdeEREN HLRGEChtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsre nsgggvegsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiieL TYRHKVVKVM RPAAEGKTVM DVisredqrg sgqvvtyaln tftniavqlv rlmeaegvIG PQHLEHLPRK NKIavrtwlf engeervtrm aisgddcavk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdelIGRA RISPGAGWNv kdtaclpkay aqmwvllyfh rrdlrlmana icsaVPVDWV PTGRTSWSIH SKGEWMTTEd mlqvwnrvwi eenEWMMDKT PITSWTDVPY vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtslRR YEDVLIQEDR VI
>Q99DQ9_REM465
1-8, 99-106, 210-232, 371-381, 1045-1058, 1085-1096, 1957-1965, 2677-2685, 2795-2805, 3030-3037
MTKKPGGPgk nrainmlkrg lprvfplvgv krvvmslldg rgpvrfvlal itffkftala ptkalsgrwk aveksvamkh ltsfkrelgt lidavnkrGR KQNKRGgneg simwlaslav viacagamkl snfqgkllmt inntdiadvi viptskgenr cwvraidvgy mcedtityec pkltmgndpe dvdcwcdnqe vyvqygrctR TRHSKRSRRS VSVQTHGESS LVnkkeawld stkatrylmk tenwiirnpg yaflaavlgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt TGEAHNEKRA Dssyvckqgf tdrgwgngcg ffgkgsidtc akfsctskai grtiqpenik ykvgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsv alklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdlalpwt spsstawrnr ellmefegah atkqsvvalg sqegglhhal agaivveyss svmltsghlk crlkmdklal kgttygmcte kfsfaknpvd tghgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg rgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igravhqvfg dafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdl svvvnkpvgr yrsapkrlsm tqekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgddv eeseliipht iagpKSKHNR REGYKTQNqg pwdengivld fdycpgtkvt itedCSKRGP SVRTTTdsgk litdwccrsc slpplrfrte ngcwygmeir pvmhdettlv rsqvhafkge mvdpfqlgll vmflatqevl rkrwtarlti pavlgvllvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasvdlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigicsllh erkktmakkk gavllglalt stgwfsptti aaglmvcnpn kkrgwpatef lsavglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswdmgaa itgssrrldv kldddgdfhf iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrggvfwd tpspkpcskg dtttgvyrim argilgtyqa gvgvmyenvf htlwhttrga aivsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvepgkga vniqtkpgvf rtpfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv qgdrqeepvp eaytpnmlrk rqmtvldlhp gsgktrkilp qiikdaiqqr lrtavlaptr vvaaemaevl rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdeipdraws sgyewiteya gktvwfvasv kmgneiamcl qragkkviql nrksydteyp kckngdwdfv ittdisemga nfgasrvidc rksvkptile egegrvilgn pspitsASAA QRRGRvgrnp nqvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gprtnailed nteveivtrm gerkilkprw ldarvyadhq alkwfkdfaa gkrsavsfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfg gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqvtl ttfltamvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv npnvttvrea gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlikna dkpslkrgrp ggrtlgeqwk eklnamsree ffkyrregii evdrtearra rsennivggh pvsrgsaklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fcdigeSSPS PEVEEqrtlr vlemtsdwlh rgprefcikv lcpympkvie kievlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrgpk yeedvnlgsg travGKGEVH SNQEKikkri qklkeefatt whkdpehpyr twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvdt kapeppagak evlnettnwl waylsrekrp rlctkeefik kvnsnaalga vfaeqnqwst areavddprf wemvdeeren hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsrE NSGGGVEgsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiiel tyrhkvvkvm rpaaegktvm dvisredqrg sgqvvtyaln tftniavqlv rlmeaegvig pqhlehlprk nkiavrtwlf engeervtrm aisgddcavk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdeligra rispgagwnv kdtaclpkay aqmwvllyfh rrdlrlmana icsavpvdwv ptgrtswsih skgewmtted mlqvwnrvwi eenewmmdkt pitswtdvpy vgkrediwcg sligtrsrat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
| JOB-ID | Q99DQ9_125137ZziVWX8AAQEAACQmnjIAAABD |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q99DQ9 |
| Description | tr|Q99DQ9|Q99DQ9_9FLAV Genome polyprotein OS=Japanese encephalitis virus OX=11072 PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 3432 |
| Download predictions | smoothed scores raw scores |