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>Q9IDV9_LOOPS
1-29, 43-54, 88-96, 108-152, 163-185, 211-240, 251-262, 277-295, 351-358, 381-433, 445-505, 534-545, 550-580, 587-620, 637-667, 685-752, 762-769, 778-786, 804-846, 858-867, 903-915, 937-952, 974-986, 999-1014, 1023-1056, 1081-1108, 1126-1138, 1172-1182, 1194-1217, 1233-1245, 1256-1271, 1284-1299, 1335-1345, 1373-1410, 1421-1440
MGARASVLTG GKLDQWEAIY LRPGGKKKYr lkhlvwasre leRFACNPGL MDTAngcaql inqlepalkt gseglrslnt lavlycvHSN IPVHNTqeal dkikekqEQH KSEPKKPEAG TAAAADSSIS RNYPLVQNAQ GQMVHQPLTP RTlnawvkvi eeKAFNPEII PMFMALSEGA TPSDLnsmln tvgghqaamq mlkevineea AEWDRTHPAP VGPLPPGQMR DPRGSDIAGT tstlaeqvaw MTSNPPIPVG DIyrrwivlg lnrivrMYSP VSILEIKQGP KEPFRdyvdr fyktlraeqa tqdvknwmte tllvqnanpd ckqilkalgp gatleemmta CQGVGGPAhk arvlaeamaq aqtatsvfvq RGNFKGIRKT IKCFNCGKEG HLARNCKAPR RRGCWKCGQE GHQMKDCKNE GQAnfrkglv slqrETRKLP PDNNKERAHS PATRELWVSG GEEHTGKGDA GEPGEDRDLS VPTLNFPQIT LWQRPvavki gkeirealld tgaddtviee iqlEGKWKPK MIGGIggfiK VRQYDNITID IQGRKAVGTV LVGPTPVNII grnfltQIGC TLNFPISPIE TVPVKLKPGM DGPRVKQWPL taekiealre ictemeKEGK ISRIGPENPY NTPIFAIKKK DSTKWRKlvd frelnkrtqe fwevQLGIPH PAGLKQKKSV TVDVGDAYFS CPLDKDFRKY TAFTIPSINN ETPGIRYQYN VLPQGWKGSP AIfqssmtki lEPFRKKHPe iiiyqymDDL YVGSDLeiaq hretveelrg hllKWGFTTP DKKHQKEPPF LWMGYELHPD KWTVQPIKLP EKEVWTvndi qklvgklNWA SQIYPGIkvk qlcklirgtk altevvtftq eaelelaenr eiLKEPLHGV YYDPGkelia eiqkqgqgqw tyqiyqEPYK NLKTGKYAKR SAhtndikel aavvqkvate sivIWGKTPK FKLPVQkevw etwwtehwQA TWIPEWEFVN TPPLvklwyq leTEPISGAE TYYVDGAANK ETKLGKAGFV TDRGRQkvvs ienttnqkae lqaillalqe SGQEANIVTD SQYAMGIIHS QPDKSESDlv gqiieelikk ervylSWVPA HKGIGGNEqv dlvssgirvl fldgiekaqe eheryhsnwk aMASDFNLPP IVakeivasc dkcQLKGEAM HGQINCSPGV WQLDCTHleg kiilvavhva sgYLEAEVIP AETGQetayf ilklaGRWPV KVIHTDNGPN Fisatvkaac wwaGIKQEFG IPYNPQSQGa vesmnkelkk iigqirdqae hlktavqmav fihnFKRKGG IGGTAgerii diiatdiqtt klqtqilkvq nfVYYRDSRD PIWKGPAKLL WKGEGAVVIQ DNGDIKVVPR rkakiirdyg KQMAGDGCVA SGQDENQDME
>Q9IDV9_HOTLOOPS
1-29, 108-124, 252-261, 283-294, 391-412, 443-471, 493-505, 517-526, 532-542, 601-621, 637-666, 683-699, 725-735, 806-816, 971-985, 1039-1056, 1100-1108, 1130-1139, 1393-1411, 1417-1440
MGARASVLTG GKLDQWEAIY LRPGGKKKYr lkhlvwasre lerfacnpgl mdtangcaql inqlepalkt gseglrslnt lavlycvhsn ipvhntqeal dkikekqEQH KSEPKKPEAG TAAAadssis rnyplvqnaq gqmvhqpltp rtlnawvkvi eekafnpeii pmfmalsega tpsdlnsmln tvgghqaamq mlkevineea aewdrthpap vgplppgqmr dprgsdiagt tstlaeqvaw mTSNPPIPVG Diyrrwivlg lnrivrmysp vsILEIKQGP KEPFrdyvdr fyktlraeqa tqdvknwmte tllvqnanpd ckqilkalgp gatleemmta cqgvggpahk arvlaeamaq aqtatsvfvq rgnfkgirkt IKCFNCGKEG HLARNCKAPR RRgcwkcgqe ghqmkdckne gqanfrkglv slQRETRKLP PDNNKERAHS PATRELWVSG Geehtgkgda gepgedrdls vpTLNFPQIT LWQRPvavki gkeireALLD TGADDTviee iQLEGKWKPK MIggiggfik vrqydnitid iqgrkavgtv lvgptpvnii grnfltqigc tlnfpispie TVPVKLKPGM DGPRVKQWPL Taekiealre ictemeKEGK ISRIGPENPY NTPIFAIKKK DSTKWRklvd frelnkrtqe fwEVQLGIPH PAGLKQKKSv tvdvgdayfs cpldkdfrky taftIPSINN ETPGIryqyn vlpqgwkgsp aifqssmtki lepfrkkhpe iiiyqymddl yvgsdleiaq hretveelrg hllkwGFTTP DKKHQKeppf lwmgyelhpd kwtvqpiklp ekevwtvndi qklvgklnwa sqiypgikvk qlcklirgtk altevvtftq eaelelaenr eilkeplhgv yydpgkelia eiqkqgqgqw tyqiyqepyk nlktgkyakr sahtndikel aavvqkvate SIVIWGKTPK FKLPVqkevw etwwtehwqa twipewefvn tpplvklwyq letepisgae tyyvdgaaNK ETKLGKAGFV TDRGRQkvvs ienttnqkae lqaillalqe sgqeanivtd sqyamgiihS QPDKSESDlv gqiieelikk ervylswvpA HKGIGGNEQv dlvssgirvl fldgiekaqe eheryhsnwk amasdfnlpp ivakeivasc dkcqlkgeam hgqincspgv wqldcthleg kiilvavhva sgyleaevip aetgqetayf ilklagrwpv kvihtdngpn fisatvkaac wwagikqefg ipynpqsqga vesmnkelkk iigqirdqae hlktavqmav fihnfkrkgg iggtagerii diiatdiqtt klqtqilkvq nfvyyrdsrd piwkgpakll wkGEGAVVIQ DNGDIKVVPR RkakiiRDYG KQMAGDGCVA SGQDENQDME
>Q9IDV9_REM465
1-8, 104-127, 450-461, 471-486, 1431-1440
MGARASVLtg gkldqweaiy lrpggkkkyr lkhlvwasre lerfacnpgl mdtangcaql inqlepalkt gseglrslnt lavlycvhsn ipvhntqeal dkiKEKQEQH KSEPKKPEAG TAAAADSsis rnyplvqnaq gqmvhqpltp rtlnawvkvi eekafnpeii pmfmalsega tpsdlnsmln tvgghqaamq mlkevineea aewdrthpap vgplppgqmr dprgsdiagt tstlaeqvaw mtsnppipvg diyrrwivlg lnrivrmysp vsileikqgp kepfrdyvdr fyktlraeqa tqdvknwmte tllvqnanpd ckqilkalgp gatleemmta cqgvggpahk arvlaeamaq aqtatsvfvq rgnfkgirkt ikcfncgkeg hlarnckapr rrgcwkcgqe ghqmkdckne gqanfrkglv slqretrklP PDNNKERAHS Patrelwvsg GEEHTGKGDA GEPGEDrdls vptlnfpqit lwqrpvavki gkeirealld tgaddtviee iqlegkwkpk miggiggfik vrqydnitid iqgrkavgtv lvgptpvnii grnfltqigc tlnfpispie tvpvklkpgm dgprvkqwpl taekiealre ictemekegk isrigpenpy ntpifaikkk dstkwrklvd frelnkrtqe fwevqlgiph paglkqkksv tvdvgdayfs cpldkdfrky taftipsinn etpgiryqyn vlpqgwkgsp aifqssmtki lepfrkkhpe iiiyqymddl yvgsdleiaq hretveelrg hllkwgfttp dkkhqkeppf lwmgyelhpd kwtvqpiklp ekevwtvndi qklvgklnwa sqiypgikvk qlcklirgtk altevvtftq eaelelaenr eilkeplhgv yydpgkelia eiqkqgqgqw tyqiyqepyk nlktgkyakr sahtndikel aavvqkvate siviwgktpk fklpvqkevw etwwtehwqa twipewefvn tpplvklwyq letepisgae tyyvdgaank etklgkagfv tdrgrqkvvs ienttnqkae lqaillalqe sgqeanivtd sqyamgiihs qpdksesdlv gqiieelikk ervylswvpa hkgiggneqv dlvssgirvl fldgiekaqe eheryhsnwk amasdfnlpp ivakeivasc dkcqlkgeam hgqincspgv wqldcthleg kiilvavhva sgyleaevip aetgqetayf ilklagrwpv kvihtdngpn fisatvkaac wwagikqefg ipynpqsqga vesmnkelkk iigqirdqae hlktavqmav fihnfkrkgg iggtagerii diiatdiqtt klqtqilkvq nfvyyrdsrd piwkgpakll wkgegavviq dngdikvvpr rkakiirdyg kqmagdgcva SGQDENQDME
| JOB-ID | Q9IDV9_044909ZukKRX8AAQEAADCSG0gAAAAR |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9IDV9 |
| Description | sp|Q9IDV9|POL_HV1YB Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group N (isolate YBF106) OX=388819 GN=gag-pol PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 1440 |
| Download predictions | smoothed scores raw scores |