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>Q9II01_LOOPS
1-14, 35-43, 57-65, 117-144, 160-228, 277-297, 308-322, 345-370, 376-405, 424-473, 494-509, 546-558, 606-658, 696-710, 747-755, 777-801, 868-938, 994-1077, 1085-1115, 1127-1136, 1189-1198, 1239-1249, 1307-1333, 1338-1352, 1367-1379, 1405-1417, 1422-1434, 1452-1460, 1472-1492, 1504-1514, 1535-1545, 1553-1569, 1575-1633, 1644-1657, 1663-1679, 1713-1727, 1743-1772, 1791-1845, 1871-1879, 1887-1925, 1933-1961, 1971-1998, 2028-2052, 2059-2082, 2089-2098, 2168-2175, 2213-2227, 2274-2281, 2323-2349, 2385-2406, 2439-2459, 2487-2500, 2517-2544, 2562-2582, 2588-2653, 2692-2710, 2736-2766, 2779-2812, 2820-2861, 2877-2887, 2901-2918, 2932-2942, 2980-3005, 3014-3051, 3063-3103, 3118-3130, 3151-3162, 3176-3203, 3213-3241, 3273-3295, 3310-3342, 3380-3392
MNNQRKKTGR PSFNmlkrar nrvstgsqla krfsKGLLSG QGPmklvmaf iaflrfLAIP PTAGIlarws sfkkngaikv lrgfkkeiss mlnimnrrkr svtmllmllp tvlafhLTTR GGEPHMIVSK QERGKSLLFK TSAGvnmctl iamdlgelcE DTMTYKCPRI TEAEPDDVDC WCNATDTWVT YGTCSQTGEH RRDKRSVALA PHVGLGLETR TETWMSSEga wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtPSMA MRCVGIGNRD FVEGLSGatw vdvvlehGSC VTTMAKNKPT LDiellktev tnpavlrklc ieakISNTTT DSRCPTQGEA TLVEEQDANF vcrrtVVDRG WGNGCGLFGK GSLLTCAKFK CVTKLegkiv qyenlkysvi vtvHTGDQHQ VGNETTEHGT IATITPQAPT SEIQLTDYGT LTLDCSPRTG LDFnemvllt mkekswlvhk qwfLDLPLPW TSGASTSQEt wnrqdllvtf ktahakkqev vvlgsqegam htaltGATEI QTSGTTTIfa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkYEGTD APCKIPFSTQ DEKGVTQNGR LITANPIVTD KEKPVNIETE PPFGESYIiv gagekalkls wfkkgssigk mfeatargar rmailGDTAW DFGSIGGVFT svgklvhqvf gtaygvlfsg vswtmkigig illtwlGLNS RSASLsmtci avgmvtlylg vmvqadSGCV INWKGRELKC GSGIFVTNEV Htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdANG ILAQGKKMIR PQPMEHKYSW KSWGKAKIIG ADTQNTTFII DGPDTPECPD DQRAWNIWEV EDYGFGIFtt niwlklrdsy tqmcdhrlms aaikdskavh admgywiese knetwklara sfiEVKTCIW PKSHTLWSNG VLESEMIIPK IYGGPISQHN YRPGYFTQTA GPWHLGKLEL DFDLCEGTTV VVDEHCGNRG PSLRTTTvtg kiihEWCCRS CTLPPLRFRG EDGCWYGMEI RPVKEkeenl vrsmvsAGSG EVDSFSlgil cvsimieevm rsrwsrkmlm tgtlavflll imgqltwndl irlcimvgAN ASDRMGMGtt ylalmatfkm rpmfavgllf rrltsrevll ltiglslvAS VELPNSLEEl gdglamgimm lklltefqph qlwttllslt fikttlsldy awktmamvls ivslfpLCLS TTSQKTTWLP VLLGSFGCKP LTMflitENK IWGRKSWPLN EGimaigivs illsslLKND VPLAGPLIAg gmliacyvis gssadlslek aaevSWEEEA EHSGTSHnil vEVQDDGTMK IKDEerddtl tillkatlla vSGVYPMSIP atlfvwyfwq kKKQRSGVLW DTPSPPEVER AVlddgiyri lqrGLLGRSQ VGVGvfqdgv fhtmwhvtrg avlmYQGKRL EPSWAsvkkd liSYGGGWRF QGSWNTGEEv qviaVEPGKN PKNVQTTPGT FKTPEGEVGA IALDFKPGTS GSPIVNREGK IVGLYGNGVV TTSgtyvsai aqaKASQEGP LPEIEDEvfk krNLTIMDLH PGSGKTRRYl paivreaikr klrtlilapt rvvasemaea lkGMPIRYQT TAVKSEHtgr eivdlmchat ftMRLLSPVR VPNYNMIIMD EAHFTDPASI AArgyistrv gmgeaaaifm TATPPGSVEA FPQSNAVIQD EERDIPERSW NSGYDWITDF PGKTVWFVPS IKSGNdianc lrkngkrviq lsrktfdtey QKTKNNDWDy vvttdiSEMG ANFRADRVID PRRCLKPVIL KDGPERVILA GPMPVtvasa aqRRGRIGRN QNKEGDQYVY MGQPLNNDED Hahwteakml LDNINTPEGI IPALFEPERE KSAAIDGEyr lrgearktfv elmrrgdlpv wlsykvaSEG FQYSDRRWCF DGERNNQVLE ENmdveiwTK EGERKKLRPR WLDARTYSDP LAlrefkeFA AGRRSVSGdl ileigklpqh ltlraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvmlfflSGK GLGKTsigll cvmassallw masvephwia asiilefflm vlLIPEPDRQ RTPQDNQlay vvigllfmil tvaanemgll ettkkdlgig hvaaenhhhv tmlDVDLRPA Sawtlyavat tvitpmmrht ienttanisl taianqaail mgLDKGWPIS KMDIGVPLLA LGCYSQVNPl tltaavlmlv ahyaiigpgl qakatreaqk rtaaGIMKNP TVDGIVAIDL DPVVYDakfe kqlgqimlli lctsqillmr ttwalcesIT LATGPLTTLW EGSPGKFWNt tiavsmanif rgsylagagl afslmkSLGG GRRGTGAQGE tlgekwkrql nqlsksEFNT YKRSGIMEVD RSEAKEGLKR GETTkhavsr gtaklrwfve rNLVKPEGKV IDLGCGRGGW SYycaglKKV TEVKGYTKGG PGHEEPIPMA TYGWNLVKLH SGKDVFFIPP EKCDTLLCDI GESSPNPTIE EGRtlrvlkm vepwlrgnqf cikilnpymp svvetleqmq rKHGGMLVRN PLSRNSTHEM ywvscgtgni vsavnmtsrm llnrfTMAHR KPTYERDVDL GAGTRHVAVE PEVANLdiig qrieniknEH KSTWHYDEDN PYKTWAYHGS YEVKPSGSAS SMvngvvrlL TKPWDVIPMV TQIAMTDTTP FGQQRVFKEK VDTRTPRAKR Gtaqimemta kwlwgfLSRN KKPRICTree firkvrsnaa IGAVFVDENQ WNSAKEAVed erfwdlvhre rELHKQGKCA TCvynmmgkr ekklgefgka kgsraiwymw lgarflefeA LGFMNEDHWF SRENSLSGVE GEGLHklgyi lrdISKIPGG NMYADDTAGW DTRITEDDLQ NEAKITDIME Pehallatsi fkLTYQNKVV RVQRPAKNGT VMDVISRRDQ RGSGQVGTYG LNTftnmevq lirqmesEGI FLPSELETPN laervldwle khgaerlkrm AISGDDCVVK PIddrfatal ialndMGKVR KDIPQWEPSK GWNDWQQVPF CSHhfhqlim kdGREIVVPC RNQDELVGRA RVSQGAGWSL Retaclgksy aqmwqlmyfh rrdlrlaana icSAVPVDWV PTSRTTWSIH AHHQWmtted mlsvwnrvwI EENPWMEDKT HVSSWEEVPY LGKREDQWCG SLigltarat watniqvain qvrrlignen yldymtsmkR FKNESDPEGA LW
>Q9II01_HOTLOOPS
1-42, 171-179, 195-218, 309-324, 343-354, 360-369, 545-556, 617-646, 874-885, 1062-1098, 1126-1136, 1408-1430, 1475-1486, 1575-1596, 1643-1654, 1664-1680, 1709-1718, 1862-1881, 1888-1923, 1929-1947, 1981-2002, 2030-2039, 2044-2083, 2384-2393, 2513-2577, 2640-2655, 2757-2768, 2778-2787, 2835-2865, 2874-2884, 2894-2915, 2929-2945, 3063-3102, 3148-3160, 3227-3239, 3378-3392
MNNQRKKTGR PSFNMLKRAR NRVSTGSQLA KRFSKGLLSG QGpmklvmaf iaflrflaip ptagilarws sfkkngaikv lrgfkkeiss mlnimnrrkr svtmllmllp tvlafhlttr ggephmivsk qergksllfk tsagvnmctl iamdlgelce dtmtykcpri TEAEPDDVDc wcnatdtwvt ygtcSQTGEH RRDKRSVALA PHVGLGLEtr tetwmssega wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtpsma mrcvgignrd fveglsgatw vdvvlehgSC VTTMAKNKPT LDIEllktev tnpavlrklc ieAKISNTTT DSRCptqgeA TLVEEQDANf vcrrtvvdrg wgngcglfgk gslltcakfk cvtklegkiv qyenlkysvi vtvhtgdqhq vgnettehgt iatitpqapt seiqltdygt ltldcsprtg ldfnemvllt mkekswlvhk qwfldlplpw tsgastsqet wnrqdllvtf ktahakkqev vvlgsqegam htalTGATEI QTSGTTtifa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkyegtd apckipFSTQ DEKGVTQNGR LITANPIVTD KEKPVNiete ppfgesyiiv gagekalkls wfkkgssigk mfeatargar rmailgdtaw dfgsiggvft svgklvhqvf gtaygvlfsg vswtmkigig illtwlglns rsaslsmtci avgmvtlylg vmvqadsgcv inwkgrelkc gsgifvtnev htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdang ilaQGKKMIR PQPMEhkysw kswgkakiig adtqnttfii dgpdtpecpd dqrawniwev edygfgiftt niwlklrdsy tqmcdhrlms aaikdskavh admgywiese knetwklara sfievktciw pkshtlwsng vlesemiipk iyggpisqhn yrpgyftqta gpwhlgklel dfdlcegttv vVDEHCGNRG PSLRTTTVTG KIIHEWCCRS CTLPPLRFrg edgcwygmei rpvkekeenl vrsmvSAGSG EVDSFSlgil cvsimieevm rsrwsrkmlm tgtlavflll imgqltwndl irlcimvgan asdrmgmgtt ylalmatfkm rpmfavgllf rrltsrevll ltiglslvas velpnsleel gdglamgimm lklltefqph qlwttllslt fikttlsldy awktmamvls ivslfplcls ttsqkttwlp vllgsfgckp ltmflitenk iwgrkswpln egimaigivs illssllknd vplagpliag gmliacyvis gssadlslek aaevsweEEA EHSGTSHNIL VEVQDDGTMK ikdeerddtl tillkatlla vsgvypmsip atlfvwyfwq kkkqRSGVLW DTPSPPever avlddgiyri lqrgllgrsq vgvgvfqdgv fhtmwhvtrg avlmyqgkrl epswasvkkd lisygggwrf qgswntgeev qviaVEPGKN PKNVQTTPGT FKTPEGevga ialdfkpgts gspivnregk ivglygngvv ttsgtyvsai aqAKASQEGP LPEIedevfk krnLTIMDLH PGSGKTRRYL paivreaikr klrtlilapt rvvasemaEA LKGMPIRYqt tavksehtgr eivdlmchat ftmrllspvr vpnynmiimd eahftdpasi aargyistrv gmgeaaaifm tatppgsvea fpqsnaviqd eerdipersw nsgydwitdf pgktvwfvps iksgndianc lrkngkrviq lSRKTFDTEY QKTKNNDWDY VvttdisEMG ANFRADRVID PRRCLKPVIL KDGPERVILA GPMpvtvaSA AQRRGRIGRN QNKEGDQyvy mgqplnnded hahwteakml ldnintpegi IPALFEPERE KSAAIDGEYR LRgearktfv elmrrgdlpv wlsykvaseG FQYSDRRWCf dgeRNNQVLE ENMDVEIWTK EGERKKLRPR WLDARTYSDP LALrefkefa agrrsvsgdl ileigklpqh ltlraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvmlfflsgk glgktsigll cvmassallw masvephwia asiilefflm vllipepdrq rtpqdnqlay vvigllfmil tvaanemgll ettkkdlgig hvaaenhhhv tmldvdlrpa sawtlyavat tvitpmmrht ienttanisl taianqaail mgldkgwpis kmdigvplla lgcysqvnpl tltaavlmlv ahyaiigpgl qakatreaqk rtaAGIMKNP TVDgivaidl dpvvydakfe kqlgqimlli lctsqillmr ttwalcesit latgplttlw egspgkfwnt tiavsmanif rgsylagagl afslmkslgg grrgtgaqge tlgekwkrql nqLSKSEFNT YKRSGIMEVD RSEAKEGLKR GETTKHAVSR GTAKLRWFVE RNLVKPEGKV IDLGCGRggw syycaglkkv tevkgytkgg pgheepipma tygwnlvklh sgkdvffipp ekcdtllcdI GESSPNPTIE EGRTLrvlkm vepwlrgnqf cikilnpymp svvetleqmq rkhggmlvrn plsrnsthem ywvscgtgni vsavnmtsrm llnrftmahr kptyerdvdl gagtrhVAVE PEVANLDIig qrienikNEH KSTWHYDedn pyktwayhgs yevkpsgsas smvngvvrll tkpwdvipmv tqiaMTDTTP FGQQRVFKEK VDTRTPRAKR GTAQImemta kwlWGFLSRN KKPRictree firKVRSNAA IGAVFVDENQ WNSAKeaved erfwdlvhRE RELHKQGKCA TCVYNmmgkr ekklgefgka kgsraiwymw lgarflefea lgfmnedhwf srenslsgve geglhklgyi lrdiskipgg nmyaddtagw dtriteddlq neakitdime pehallatsi fkLTYQNKVV RVQRPAKNGT VMDVISRRDQ RGSGQVGTYG LNtftnmevq lirqmesegi flpseletpn laervldwle khgaerlKRM AISGDDCVVK piddrfatal ialndmgkvr kdipqwepsk gwndwqqvpf cshhfhqlim kdgreivvpc rnqdelVGRA RVSQGAGWSl retaclgksy aqmwqlmyfh rrdlrlaana icsavpvdwv ptsrttwsih ahhqwmtted mlsvwnrvwi eenpwmedkt hvssweevpy lgkredqwcg sligltarat watniqvain qvrrlignen yldymtsMKR FKNESDPEGA LW
>Q9II01_REM465
1-9, 21-28, 195-205, 1396-1414, 2371-2381, 2490-2499, 2535-2549, 3382-3392
MNNQRKKTGr psfnmlkrar NRVSTGSQla krfskgllsg qgpmklvmaf iaflrflaip ptagilarws sfkkngaikv lrgfkkeiss mlnimnrrkr svtmllmllp tvlafhlttr ggephmivsk qergksllfk tsagvnmctl iamdlgelce dtmtykcpri teaepddvdc wcnatdtwvt ygtcSQTGEH RRDKRsvala phvglgletr tetwmssega wkqiqkvetw alrhpgftvi alflahaigt sitqkgiifi llmlvtpsma mrcvgignrd fveglsgatw vdvvlehgsc vttmaknkpt ldiellktev tnpavlrklc ieakisnttt dsrcptqgea tlveeqdanf vcrrtvvdrg wgngcglfgk gslltcakfk cvtklegkiv qyenlkysvi vtvhtgdqhq vgnettehgt iatitpqapt seiqltdygt ltldcsprtg ldfnemvllt mkekswlvhk qwfldlplpw tsgastsqet wnrqdllvtf ktahakkqev vvlgsqegam htaltgatei qtsgtttifa ghlkcrlkmd kltlkgmsyv mctgsfklek evaetqhgtv lvqvkyegtd apckipfstq dekgvtqngr litanpivtd kekpvniete ppfgesyiiv gagekalkls wfkkgssigk mfeatargar rmailgdtaw dfgsiggvft svgklvhqvf gtaygvlfsg vswtmkigig illtwlglns rsaslsmtci avgmvtlylg vmvqadsgcv inwkgrelkc gsgifvtnev htwteqykfq adspkrlsaa igkaweegvc girsatrlen imwkqisnel nhillendmk ftvvvgdang ilaqgkkmir pqpmehkysw kswgkakiig adtqnttfii dgpdtpecpd dqrawniwev edygfgiftt niwlklrdsy tqmcdhrlms aaikdskavh admgywiese knetwklara sfievktciw pkshtlwsng vlesemiipk iyggpisqhn yrpgyftqta gpwhlgklel dfdlcegttv vvdehcgnrg pslrtttvtg kiihewccrs ctlpplrfrg edgcwygmei rpvkekeenl vrsmvsagsg evdsfslgil cvsimieevm rsrwsrkmlm tgtlavflll imgqltwndl irlcimvgan asdrmgmgtt ylalmatfkm rpmfavgllf rrltsrevll ltiglslvas velpnsleel gdglamgimm lklltefqph qlwttllslt fikttlsldy awktmamvls ivslfplcls ttsqkttwlp vllgsfgckp ltmflitenk iwgrkswpln egimaigivs illssllknd vplagpliag gmliacyvis gssadLSLEK AAEVSWEEEA EHSGtshnil vevqddgtmk ikdeerddtl tillkatlla vsgvypmsip atlfvwyfwq kkkqrsgvlw dtpsppever avlddgiyri lqrgllgrsq vgvgvfqdgv fhtmwhvtrg avlmyqgkrl epswasvkkd lisygggwrf qgswntgeev qviavepgkn pknvqttpgt fktpegevga ialdfkpgts gspivnregk ivglygngvv ttsgtyvsai aqakasqegp lpeiedevfk krnltimdlh pgsgktrryl paivreaikr klrtlilapt rvvasemaea lkgmpiryqt tavksehtgr eivdlmchat ftmrllspvr vpnynmiimd eahftdpasi aargyistrv gmgeaaaifm tatppgsvea fpqsnaviqd eerdipersw nsgydwitdf pgktvwfvps iksgndianc lrkngkrviq lsrktfdtey qktknndwdy vvttdisemg anfradrvid prrclkpvil kdgpervila gpmpvtvasa aqrrgrigrn qnkegdqyvy mgqplnnded hahwteakml ldnintpegi ipalfepere ksaaidgeyr lrgearktfv elmrrgdlpv wlsykvaseg fqysdrrwcf dgernnqvle enmdveiwtk egerkklrpr wldartysdp lalrefkefa agrrsvsgdl ileigklpqh ltlraqnald nlvmlhnseq ggkayrhame elpdtietlm llaliavltg gvmlfflsgk glgktsigll cvmassallw masvephwia asiilefflm vllipepdrq rtpqdnqlay vvigllfmil tvaanemgll ettkkdlgig hvaaenhhhv tmldvdlrpa sawtlyavat tvitpmmrht ienttanisl taianqaail mgldkgwpis kmdigvplla lgcysqvnpl tltaavlmlv ahyaiigpgl QAKATREAQK Rtaagimknp tvdgivaidl dpvvydakfe kqlgqimlli lctsqillmr ttwalcesit latgplttlw egspgkfwnt tiavsmanif rgsylagagl afslmkslgG GRRGTGAQGe tlgekwkrql nqlsksefnt ykrsgimevd rseaKEGLKR GETTKHAVSr gtaklrwfve rnlvkpegkv idlgcgrggw syycaglkkv tevkgytkgg pgheepipma tygwnlvklh sgkdvffipp ekcdtllcdi gesspnptie egrtlrvlkm vepwlrgnqf cikilnpymp svvetleqmq rkhggmlvrn plsrnsthem ywvscgtgni vsavnmtsrm llnrftmahr kptyerdvdl gagtrhvave pevanldiig qrienikneh kstwhydedn pyktwayhgs yevkpsgsas smvngvvrll tkpwdvipmv tqiamtdttp fgqqrvfkek vdtrtprakr gtaqimemta kwlwgflsrn kkprictree firkvrsnaa igavfvdenq wnsakeaved erfwdlvhre relhkqgkca tcvynmmgkr ekklgefgka kgsraiwymw lgarflefea lgfmnedhwf srenslsgve geglhklgyi lrdiskipgg nmyaddtagw dtriteddlq neakitdime pehallatsi fkltyqnkvv rvqrpakngt vmdvisrrdq rgsgqvgtyg lntftnmevq lirqmesegi flpseletpn laervldwle khgaerlkrm aisgddcvvk piddrfatal ialndmgkvr kdipqwepsk gwndwqqvpf cshhfhqlim kdgreivvpc rnqdelvgra rvsqgagwsl retaclgksy aqmwqlmyfh rrdlrlaana icsavpvdwv ptsrttwsih ahhqwmtted mlsvwnrvwi eenpwmedkt hvssweevpy lgkredqwcg sligltarat watniqvain qvrrlignen yldymtsmkr fKNESDPEGA LW
| JOB-ID | Q9II01_071637Zuks1X8AAQEAADCTl9MAAABJ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9II01 |
| Description | tr|Q9II01|Q9II01_9FLAV Genome polyprotein OS=dengue virus type 1 OX=11053 PE=4 SV=2 |
| Title/ID | none |
| Sequence length | 3392 |
| Download predictions | smoothed scores raw scores |