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>Q9J0X3_LOOPS
1-11, 19-27, 100-110, 142-239, 271-278, 291-312, 322-336, 355-432, 439-493, 512-526, 571-581, 590-614, 620-652, 664-676, 681-698, 714-727, 792-817, 880-899, 917-953, 968-980, 1010-1137, 1145-1156, 1289-1299, 1349-1378, 1394-1403, 1441-1467, 1479-1489, 1500-1525, 1559-1599, 1606-1666, 1671-1689, 1696-1707, 1742-1761, 1771-1800, 1819-1851, 1893-1908, 1917-1992, 2001-2031, 2058-2082, 2091-2103, 2134-2142, 2219-2227, 2241-2253, 2290-2323, 2345-2365, 2425-2443, 2458-2470, 2480-2509, 2518-2535, 2572-2585, 2596-2613, 2628-2647, 2653-2685, 2697-2708, 2730-2746, 2770-2801, 2819-2847, 2870-2900, 2915-2924, 2947-2961, 2969-2976, 2981-3000, 3019-3042, 3053-3074, 3109-3118, 3125-3132, 3155-3171, 3191-3203, 3224-3244, 3251-3282, 3314-3338, 3353-3387
MTKKPGGPGK NrainmlkRG LPRVFPLvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrgR KQNKRGGNEG simwlaclav viayagamkl snfqgkllmt iNNTDIADVI VIPTSKGENR CWVRAIDVGY MCEDTITYEC PKLTMGNDPE DVDCWCDNQQ VYVQYGPCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLd stkatrylmk tenwiirnpg yaflaaalgw MLGSNNGQrv vftillllva PAYSFNCLGM GNRDFIEGAS GAtwvdlvle gDSCLTIMAN DKPTLDvrmi nieasqlaev rsycYHASVT DISTVARCPT TGEAHNEKQA DSSYVCKQGF TDRGWGNGCG LFGKGSIDTC AKFSCTSKAI GRTIQPENIK YEvgifvhGT TTSENHGNYS AQVGASQAAK FTVTPNAPSI TLKLGDYGEV TLDCEPRSGL NTEafyvmtv gsksflvhre wFHDLALPWT SPSSTAwrnr ellmefeeah atkqsvvalg sqegglhqal agaivveyss SVKLTSGHLK CrlkmdklaL KGTTYGMCTE KFSFAKNPAD TGHGtvvieL SYSGSDGPCK IPIVSVASLN DMTPVGRLVT VNpfvatssa nskVLVEMEP PFGDSYivvg MGDKQINHHW HKAGSTLGka fsttlkgaqr laaLGDTAWD FGSIGGVfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nVHADTGCAI DITRKEMRCG SGIFVHNdve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdL SVVVNKPVGR YRSAPKRLSm tqekfemgwk awgksiLFAP ELANSTFVVD GPETKECPDE HRAWNSMQIE DFGfgitstr vwlkireEST DECDGAIIGT avkghvavhs dlsywiesry ndtwkleraV FGEVKSCTWP ETHTLWGDGV EESELIIPHT IAGPKSKHNR REGYKTQNQG PWDENGIVLD FDYCPGTKVT ITEDCGKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFRTE NGCWYGMEIR PVRHDEAtlv rsqvDAFNGE MVDPFQlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasadlqig vhgilnaaai awmivraiTF PTTSSVTMPv lalltpgmra lyldtyriil lvigvcsllq erkktmakkk gavlmglaLT STGWFSPTTI TAGLMVCNPN KKRGWPATef lsaiglmfai vggLAELDIE SMSipfmlag lmavsyvvsg katdmwlera adiswemdaa ITGSSRRLDV KLDDDGDFHL IDDPGVPwkv wvlrmsciGL AALTPWAIVp aafgywltlK TTKRGGVFWD TPSPKPCSKG DTTTGvyrim argilgtyqa gvgvmyenvf htlwhttrGA AIMSGEGKLT PYWGSVKEDR IAYGGPWRFD RKWNGTDDVq vivvePGKAA VNIQTKPGVF RTPFGEVGAV SLDYPRGTSG SPILDSNGDI IGLYGNGVEL GDGSYVsaiv QGDRQEEPVP EAYTPNMLRk rqmtvLDLHP GSGKTRKilp qiikdaiqqr lrtavlaptr vvaaemaeal rGLPVRYQTS AVQREHQGNE Ivdvmchatl THRLMSPNRV PNYNLFVMDE AHFTDPASIA argyiatkve lgeaaaifMT ATPPGTTDPF PDSNAPIHDL QDGSWSSGGI Riyewiteya gktvwfvasv kmgneiamcl qragkkviql nrKSYDTEYP KCKNGDWDfv ittdisEMGA NFGASRVIDC RKSVKPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQVGDEYHYG GATSEDDSNL AHwteakiml DNIHMPNGLV AQLYGPEREK AFTMDGEYRL Rgeekknfle llrtadlpvw laykvasNGI QYTDRKWCFD GPRTNAILED NTeveivtrm GERKILKPRW LDArvyadhq alkwfkdfaa gkrsaisfie vlgRMPEHFM GKtrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwAA EVPGTKIagt llialllmvv LIPEPEKQRS QTDnqlavfl icvltvvgvv aaneygmlek tkadlksmfA GKTQASGLTG LPSMALDLRP ATAWALYGGS TVVltpllkh litseyvtts lasiNSQAGS LFVLPRGVPF TDLDLtvglv flgcwgqitl ttfltavvla tlhygymlpg wqaealraaq rrtaagimkn avvdGMVATD VPELERTTPL MQKkvgqvll igvsvaaFLV NPNVTTVKKP gvlvtaatlT LWDNGASAVW NSTTATGLCH VMRGSYLAGg siawtliKNA DKPSLKRGRP GGRTLgeqwk eklnamsree ffkyrreaii evdrtearra rRENNIVGGH PVSRGsaklr wlvekGFVSP IGKVIDLGCG RGGwsyyaat lkkvqevRGY TKGGAGHEEP MLMQSYGwnl vsLKSGVDVF YKPSEPSDTL FCDIGESSPS PEVEEqrtlr vlemtsDWLH RGPREFCIkv lcpympkvie kmevlqrrfG GGLVRLPLSR NSNHEMywvs gaagnvvhav nmtsqvllgR MDRTVWRGPK YEEDVNLGSG TRAVGKGEVH Snqekikkri qklkeefaTT WHKDPEHPYR TWTYHGSYEV KATGSASslv ngvvklmskp wdaianvttM AMTDTTPFGQ QRVFKEKVDT KAPEPPAGAK evlnettnwl wahlSREKRP RLCTkeefik kvnsnaalga vfaeqnQWST AREAVDDPRF WemvdeerEN HLRGEChtci YNMMGKREKK PGEFGKAKGS raiwfmwlga rylefealGF LNEDHWLSRE NSGGGVEGSG VQklgyilrd iaGKQGGKMY ADDTAGWDTR ITRTdlenea kvlelldgeh rmlaraiiel tyrhkvvkVM RPAAEGKTvm dvisREDQRG SGqvvtyaln tftniavqlv rlmeAEGVIG PQHLEQLPRK Tkiavrtwlf engeervtrm AISGDDCVVK PLDdrfatal hflnamskvr kdiQEWKPSH GWHDWQQVPF CSNHfqeivm KDGRSIVVPC RGQDELIGRA RISPGAGWNV KDtaclakay aqmwlllyfh rrdlrlmana icsAVPVDWV PTGRTSWSIH SKGEWMTTed mlqvwnrvwi eeNEWMMDKT PITSWTDVPY VGKREDIWCG SLIGTRTrat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
>Q9J0X3_HOTLOOPS
1-26, 90-112, 150-163, 206-241, 374-384, 419-430, 515-524, 574-584, 604-612, 875-902, 1040-1067, 1080-1117, 1505-1524, 1609-1623, 1671-1689, 1698-1708, 1894-1906, 1921-1930, 1936-1972, 2073-2100, 2461-2470, 2517-2539, 2558-2587, 2672-2687, 2695-2704, 2778-2806, 2818-2830, 2892-2904, 2913-2923, 2943-2955, 2967-2976, 3100-3122, 3159-3172, 3181-3198, 3267-3279, 3315-3339, 3354-3370, 3419-3432
MTKKPGGPGK NRAINMLKRG LPRVFPlvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgT LIDAVNKRGR KQNKRGGNEG SImwlaclav viayagamkl snfqgkllmt inntdiadvI VIPTSKGENR CWVraidvgy mcedtityec pkltmgndpe dvdcwcdnqq vyvqyGPCTR TRHSKRSRRS VSVQTHGESS LVNKKEAWLD Stkatrylmk tenwiirnpg yaflaaalgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt tgeAHNEKQA DSSYvckqgf tdrgwgngcg lfgkgsidtc akfsctskAI GRTIQPENIK yevgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsi tlklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdLALPWT SPSStawrnr ellmefeeah atkqsvvalg sqegglhqal agaivveyss svkLTSGHLK CRLKmdklal kgttygmcte kfsFAKNPAD TGhgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg mgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkENAVDL SVVVNKPVGR YRSAPKRLSM TQekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgdgv eeseliiphT IAGPKSKHNR REGYKTQNQG PWDENGIvld fdycpgtkvT ITEDCGKRGP SVRTTTDSGK LITDWCCRSC SLPPLRFrte ngcwygmeir pvrhdeatlv rsqvdafnge mvdpfqlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasadlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigvcsllq erkktmakkk gavlmglalt stgwfsptti taglmvcnpn kkrgwpatef lsaiglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrGGVFWD TPSPKPCSKG DTTTgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvepgkAA VNIQTKPGVF RTPfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv QGDRQEEPVP EAYTPNMLRk rqmtvldLHP GSGKTRKIlp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdgswssggi riyewiteya gktvwfvasv kmgneiamcl qragkkviql nrkSYDTEYP KCKNGDwdfv ittdisemga NFGASRVIDC rksvkPTILE EGEGRVILGN PSPITSASAA QRRGRVGRNP NQvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gpRTNAILED NTEVEIVTRM GERKILKPRW ldarvyadhq alkwfkdfaa gkrsaisfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfa gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltavvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv NPNVTTVKKP gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlIKNA DKPSLKRGRP GGRTLGEQWk eklnamsree ffkyrreAII EVDRTEARRA RRENNIVGGH PVSRGSAklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fCDIGESSPS PEVEEQRtlr vlemTSDWLH RGPRefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrGPK YEEDVNLGSG TRAVGKGEVH SNQEKIkkri qklkeefATT WHKDPEHPYR twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvdt kAPEPPAGAK EVLNettnwl waHLSREKRP RLCtkeefik kvnsnaalga vfAEQNQWST AREAVddprf wemvdeEREN HLRGEChtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsre nsgggvegsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiieL TYRHKVVKVM RPAAEGKTVM DVisredqrg sgqvvtyaln tftniavqlv rlmeaegvIG PQHLEQLPRK TKiavrtwlf ENGEERVTRM AISGDDCVvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdelIGRA RISPGAGWNv kdtaclakay aqmwlllyfh rrdlrlmana icsaVPVDWV PTGRTSWSIH SKGEWMTTEd mlqvwnrvwi eenEWMMDKT PITSWTDVPY vgkrediwcg sligtrtrat waeniyaain qvravigken yvdymtslRR YEDVLIQEDR VI
>Q9J0X3_REM465
1-8, 99-106, 210-232, 371-381, 1044-1058, 1957-1965, 2677-2685, 2795-2805, 3030-3037
MTKKPGGPgk nrainmlkrg lprvfplvgv krvvmslldg rgpvrfvlal itffkftala ptkallgrwk aveksvamkh ltsfkrelgt lidavnkrGR KQNKRGgneg simwlaclav viayagamkl snfqgkllmt inntdiadvi viptskgenr cwvraidvgy mcedtityec pkltmgndpe dvdcwcdnqq vyvqygpctR TRHSKRSRRS VSVQTHGESS LVnkkeawld stkatrylmk tenwiirnpg yaflaaalgw mlgsnngqrv vftillllva paysfnclgm gnrdfiegas gatwvdlvle gdscltiman dkptldvrmi nieasqlaev rsycyhasvt distvarcpt TGEAHNEKQA Dssyvckqgf tdrgwgngcg lfgkgsidtc akfsctskai grtiqpenik yevgifvhgt ttsenhgnys aqvgasqaak ftvtpnapsi tlklgdygev tldceprsgl nteafyvmtv gsksflvhre wfhdlalpwt spsstawrnr ellmefeeah atkqsvvalg sqegglhqal agaivveyss svkltsghlk crlkmdklal kgttygmcte kfsfaknpad tghgtvviel sysgsdgpck ipivsvasln dmtpvgrlvt vnpfvatssa nskvlvemep pfgdsyivvg mgdkqinhhw hkagstlgka fsttlkgaqr laalgdtawd fgsiggvfns igkavhqvfg gafrtlfggm switqglmga lllwmgvnar drsialafla tggvlvflat nvhadtgcai ditrkemrcg sgifvhndve awvdrykylp etprslakiv hkahkegvcg vrsvtrlehq mweavrdeln vllkenavdl svvvnkpvgr yrsapkrlsm tqekfemgwk awgksilfap elanstfvvd gpetkecpde hrawnsmqie dfgfgitstr vwlkireest decdgaiigt avkghvavhs dlsywiesry ndtwklerav fgevksctwp ethtlwgdgv eeseliipht iagPKSKHNR REGYKTQNqg pwdengivld fdycpgtkvt itedcgkrgp svrtttdsgk litdwccrsc slpplrfrte ngcwygmeir pvrhdeatlv rsqvdafnge mvdpfqlgll vmflatqevl rkrwtarlti pavlgallvl mlggitytdl aryvvlvaaa faeansggdv lhlaliavfk iqpaflvmnm lstrwtnqen vvlvlgaaff qlasadlqig vhgilnaaai awmivraitf pttssvtmpv lalltpgmra lyldtyriil lvigvcsllq erkktmakkk gavlmglalt stgwfsptti taglmvcnpn kkrgwpatef lsaiglmfai vgglaeldie smsipfmlag lmavsyvvsg katdmwlera adiswemdaa itgssrrldv kldddgdfhl iddpgvpwkv wvlrmscigl aaltpwaivp aafgywltlk ttkrggvfwd tpspkpcskg dtttgvyrim argilgtyqa gvgvmyenvf htlwhttrga aimsgegklt pywgsvkedr iayggpwrfd rkwngtddvq vivvepgkaa vniqtkpgvf rtpfgevgav sldyprgtsg spildsngdi iglygngvel gdgsyvsaiv qgdrqeepvp eaytpnmlrk rqmtvldlhp gsgktrkilp qiikdaiqqr lrtavlaptr vvaaemaeal rglpvryqts avqrehqgne ivdvmchatl thrlmspnrv pnynlfvmde ahftdpasia argyiatkve lgeaaaifmt atppgttdpf pdsnapihdl qdgswssggi riyewiteya gktvwfvasv kmgneiamcl qragkkviql nrksydteyp kckngdwdfv ittdisemga nfgasrvidc rksvkptile egegrvilgn pspitsASAA QRRGRvgrnp nqvgdeyhyg gatseddsnl ahwteakiml dnihmpnglv aqlygperek aftmdgeyrl rgeekknfle llrtadlpvw laykvasngi qytdrkwcfd gprtnailed nteveivtrm gerkilkprw ldarvyadhq alkwfkdfaa gkrsaisfie vlgrmpehfm gktrealdtm ylvataekgg kahrmaleel pdaletitli vaitvmtggf fllmmqrkgi gkmglgalvl tlatfflwaa evpgtkiagt llialllmvv lipepekqrs qtdnqlavfl icvltvvgvv aaneygmlek tkadlksmfa gktqasgltg lpsmaldlrp atawalyggs tvvltpllkh litseyvtts lasinsqags lfvlprgvpf tdldltvglv flgcwgqitl ttfltavvla tlhygymlpg wqaealraaq rrtaagimkn avvdgmvatd vpelerttpl mqkkvgqvll igvsvaaflv npnvttvkkp gvlvtaatlt lwdngasavw nsttatglch vmrgsylagg siawtlikna dkpslkrgrp ggrtlgeqwk eklnamsree ffkyrreaii evdrtearra rrennivggh pvsrgsaklr wlvekgfvsp igkvidlgcg rggwsyyaat lkkvqevrgy tkggagheep mlmqsygwnl vslksgvdvf ykpsepsdtl fcdigeSSPS PEVEEqrtlr vlemtsdwlh rgprefcikv lcpympkvie kmevlqrrfg gglvrlplsr nsnhemywvs gaagnvvhav nmtsqvllgr mdrtvwrgpk yeedvnlgsg travGKGEVH SNQEKikkri qklkeefatt whkdpehpyr twtyhgsyev katgsasslv ngvvklmskp wdaianvttm amtdttpfgq qrvfkekvdt kapeppagak evlnettnwl wahlsrekrp rlctkeefik kvnsnaalga vfaeqnqwst areavddprf wemvdeeren hlrgechtci ynmmgkrekk pgefgkakgs raiwfmwlga rylefealgf lnedhwlsrE NSGGGVEgsg vqklgyilrd iagkqggkmy addtagwdtr itrtdlenea kvlelldgeh rmlaraiiel tyrhkvvkvm rpaaegktvm dvisredqrg sgqvvtyaln tftniavqlv rlmeaegvig pqhleqlprk tkiavrtwlf engeervtrm aisgddcvvk plddrfatal hflnamskvr kdiqewkpsh gwhdwqqvpf csnhfqeivm kdgrsivvpc rgqdeligra rispgagwnv kdtaclakay aqmwlllyfh rrdlrlmana icsavpvdwv ptgrtswsih skgewmtted mlqvwnrvwi eenewmmdkt pitswtdvpy vgkrediwcg sligtrtrat waeniyaain qvravigken yvdymtslrr yedvliqedr vi
| JOB-ID | Q9J0X3_071539Zuksm38AAQEAADCSJh4AAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9J0X3 |
| Description | tr|Q9J0X3|Q9J0X3_9FLAV Genome polyprotein OS=Japanese encephalitis virus OX=11072 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3432 |
| Download predictions | smoothed scores raw scores |