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>Q9J3E9_LOOPS
1-50, 57-67, 76-85, 99-108, 114-124, 132-144, 150-176, 189-232, 240-272, 317-337, 360-472, 480-488, 534-543, 562-584, 744-769, 774-850, 870-879, 892-904, 920-965, 972-985, 992-1028, 1038-1047, 1067-1077, 1093-1117, 1160-1176, 1221-1256, 1261-1271, 1296-1305, 1313-1327, 1339-1351, 1379-1393, 1400-1410, 1437-1444, 1461-1472, 1507-1516, 1528-1535, 1545-1595, 1636-1644, 1653-1667, 1673-1682, 1689-1698, 1706-1713, 1740-1747, 1757-1768, 1779-1856, 1863-1902, 1917-1946, 1978-2008, 2015-2029, 2035-2088, 2110-2149, 2191-2201, 2207-2217, 2241-2248, 2302-2317, 2330-2370, 2470-2536, 2548-2560, 2576-2587, 2596-2609, 2707-2720, 2733-2751, 2816-2834, 2859-2901, 2912-2922, 2930-2944, 2957-2983, 2992-3038, 3053-3092, 3181-3190, 3233-3243, 3308-3326, 3333-3348, 3354-3400, 3423-3441, 3448-3456, 3463-3483, 3496-3528, 3546-3558, 3601-3623, 3734-3744, 3885-3895, 3907-3915, 3981-3989, 3996-4003, 4033-4040, 4119-4149, 4178-4189, 4206-4214, 4220-4242, 4251-4283, 4314-4324, 4334-4355, 4364-4467
MGKYGLGFKW APEFPWMLPN ASEKLGSPER SEEDGFCPSA AQEPKTKGKT lvnhvrVNCS RLPALECcvq saiirDIFVD EDPQKveast mmalqfgsAV LVKPSKRLsi qawTNLGVLP KTAAmglfkr vCLCNTRECS CDAHvafhlF TVQPDGVCLG NGRFIGWFVP VTAIPEyakq wlqpwsilLR KGGNKGSVTS GHFRRAVTMP VYDFNVEDAC EEVHLNPKGK YSckayallK GYRGVKPILF VDQYGCDYTG CLAKGLEDYG DLtlsemkel fpvwrdslds evlvawhvdr dpraamrlqt latvrcIDYV GQPTEDVVDG DVVVREPahl laanaivkrl prlvetmlyT DSSVTEFCYK TKLCECGFIT QFGYVDCCGD TCDFRGWVAG NMMDGFPCPG CTKNYMPWEL EAQSSGVIPE GGVLFTQSTD TVNRESFKLY GHAVVPFGSA VYWSPCPGMW LPviwssvkS YSGLTYTGvv gckaivqetd aicrslymdy vqhkcgnleq railglddvy hrqLLVNRGD YSLllenvdl fvkrraefac kFATCGDGLV PLLLDGLVPR SYYLiksgqa ftsmmvnfsh evtdmcmdma llfmhdvkva tkyvkkvtgk lavrfkawgv avvrkitewf dlavdiaasa agwlcyqlvn glfavangvi tfvqevpelv knfvdkfkaf fkvlidsmsv silsgltvvk tasnrvclag skvyevvqks lsaYVMPVGC SEATCLVGEI EPAVFEDDVv dvvKAPLTYQ GCCKPPTSFE KICIVDKLYM AKCGDQFYPV VVDNDTVGVL DQCWRFPCAG KKVEFNDKPK VRKIPSTRKI kitfaldatf dsvlskacsE FEVDKDVTLd elldvvldav eSTLSPCKEH DVIGtkvcal ldrlagdyvY LFDEGGDEVI APRMYCSFSA PDDEDCVAAD VVDADENQDD DAEDSavlva dTQEEDGVAK GQVEAdseic vAHTGSQEEL AEPDAVGSQT PIASAEETEV GEASDREGia eakatvcADA VDACPDQvea feiekvedsi ldelqtELNA PADKTYEdvl afdavcseal saFYAVPSDE THFKVCGFYS PAIERTNcwl rstlivmqsl plefkdlemq klwlsykagy dqcfvdklvK SVPKSIIRPQ GGYVADfayf flsqcsfkay anwrclecdm elklqgldam ffygdvvshm CKCGNSMTLL SADIPYTLHF GVRDDKFCAF YTPRKVfraa CAVDVNDCHS Mavvegkqid gkvvtkfigd kfdfmVGYGM TFSMSpfela qlYGSCITPN VCFVKGDvik vvrlvnaeVI VNPANGRMAH Gagvagaiae kagsafiket sdmvkaqgVC QVGECYESAG GKLckkvlnI VGPDARGHGK qcyslleray qhinkcdnvv ttlisaGIFS VPTDvsltyl lgvvtknvil VSNNQDDFDV IEkcqvtsva gtkalslqla knlcrdvkfv tnacssLFSE SCFVSSydvl qevealrHDI QLDDDarvfv qanmDCLPTD WRLVNKFDSV DGVRTIKYFE CPGGIFVSSQ GKKFGYVQNG SFKEAsvsqi rallankvdv lctvdgvnfr sccvaegevf gktlgSVFCD GINVtkvrcs aiYKGKVFFQ YSDLSEAdlv avKDAFGFDE PQllkyytML GMCKWPVVvc gnyfaFKQSN NNCyinvacl mlqhlslkfp kwqwqeawnE FRSGKPLrfv slvlakGSFK FNEPSDSIdf mrvvlreaDL SGATCNLEFV CKCGVKQEQR KGVDAVMHFG TLDKGDLVRG YNIACTCGSK LVHCTQFNVP FLICSNTPEG RKLPDDvvaa niFTGGSVGH YTHVKCKPKY QLYDACNVNK VSEAKGNFTD CLylknlkqt fssvltTFYL DDVKCVEYKP DLSQYYCESG KYYTKPiika qfrtfekvdg vytnfklvgh siaeklnAKL GFDCNSPFVE YKITEWPTAT GDVVLASDdl yvsrYSSGCI TFGKPVVWLg heeaSLKSLT YFNRPSVVCE NKFNVLPVDV SEPTDKGPVP AAVLVTGVPG ADASAGAGia keqkacasas vedqvvtevR QEPSVSAADV KEVKLNGVKK PVKVEGSVVV NDPTSETKVv kslsivdvyd mfltgckyvv wtanelsrlv nsptvreyvk WGMGKIVTPA KllllrDEKQ EFVAPKVvka kaiacycavk wfllycfswi KFNTDNKViy ttevaskltf klcclafkna lqtfnwsvvs rgfflvatvf llwfnflyan vILSDFYLPN IGPLPTFvgq ivawfkttfG VSTICDFYQV TDLGYRSSFC NGSMVCELCF SGFDMLDNYD ainvvqhvvd rrlsfdyisl fklvvelvig yslytvcfyp lfvligmqll ttwlpeffml etmhwsarlf vfvanmlpaf tllrfyivvt amykvyclcR HVMYGCSKPG CLFCYKRNRS VRVKCSTVVG GSLRYYDVMA NGGTGFCTKH QWNCLNCNSW KPGNTFithe aaadlskELK RPVNPTDSAY ysvtevkqvg csmrlFYERD GQRVYDDvna slfvdMNGLL HSKVKGVPEt hvvvvenead kagflgaavf yaqslyrpml mvekklitta ntglsvsrtm fdlyvdslln vldvdrkslt sfvnaahnsl kegvqleqvm dtfigcARRK CAIDSDVETK sitksvmsav naGVDFTDES CNNLVPTYVK Sdtivaadlg vliqnnakhv qanvakaanv aciwsvdafn qlsadlqhrl rkacsktglk ikltyNKQEA NVPILTTPFS LKGGavfsrm lqwlfvanli cfivlwalMP TYAVHKSDMQ LPLYASFKVI DNGVLRDVSV TDACFANKFN Qfdqwyestf gLAYYRNSKA CPvvvavidQ DIGHTLFNVP TTVLrygfhv lhfithAFAT DSVQCYTPHM QIPYDNFYAS GCVlsslctm lAHADGTPHP YCYTGGVMHN ASLYSSLAPH VRYNLASSNG YIRFPEVVse givrvvrtrs mtYCRVGLCE EAEEGICFNF NRSWVLNNPY YRAMPGTFCG RNafdlihqv lgglvrpidf faltassvag ailaiivvla fyyliklkra fgdytsvvvi nvivwcinfl mlfvfqvypt lsclyacfyf YTTLYFPSEI svvmhlqwlv mygaimplwf ciiyvavvvs nhalwlfsyc rkIGTEVRSD GTFeemaltt fmitkesyck lknsvsdvaf nrylslynky ryfsgkmdta ayreaacsql akametfNHN NGNDVLYQPP TASVTTsflq sgIVKMVSPT SKVEPCIVsv tygNMTLNGL WLDDKVYCPR HVICSSADMT DPDYPNLLCR VTSSDFCVMS grmsltvmsy qmqgcqlvlt vtLQNPNTPK YSFGVVKPGE TftvlaaYNG RPQGAFhvtl rsSHTIKGSF LCGSCGSVGY VLTgdsvrfv ymhqlELSTG CHTGTDFSGN FYGPYRDAQV VQLPVQDYtq tvnvvawlya aifnrCNWFV QSDSCSLEef nvwamtngfs sikadlvlda lasmtgvtve qvlaaikrlh SGFQGKQILG SCVLEDELTP SDVyqqlagv klqskrtrvi kgtccwilas tflfcsiisa fvkwtmfmyv tthmlgvtlc alcfvsfaml likhkhlylt myimpvlctl fytnylvvyk qsfrglayaw lshFVPAVDY TYMDevlygv vllvamvfvt mrsinhdvfs imflvgrlvs lvsmwyfgan leeevllflt slfgtytwtt mlslatakvi akwlavnvly ftdvpqiklv llsylcigyv cccywgilsl lnsifrmpfg vynykisvqe lrymNANGLR PPRNSfealm lnfkllGIGG VPVIEvsqiq srltdvkcan vvllnclqhl hiasnsklwq ycstlhneil atsdlsvafd klaqllvvlf ANPAAVDSKc lasieEVSDD YVRdntvlqa lqsefvnmas fveyelakkn ldEAKASGSA nqqqikqlek acniaksaye rdravarkle rmadlaltnm ykearindkk skvvsalqtm lfsmvrkldn qalnsildNA VKGCVPLNAI PSLTSNTLTI IVPDKQVFDq vvdnvyvtya gnvwhiqfiq dadgavkQLN EIDVNSTWPl viaanrhnev stvvlQNNEL MPQKlrtqvV NSGSDMNCNT PTQCYYNTTG TGkivyails DCDGLKYTKI VKEDGNCVVL ELDPPCKFSV QDVkglkiky lyfvkgcntl argwvvgtls stvRLQAGTA TEYAcnsail slcAFSVDPK KTYLDYIKQG GVPVTncvkm lcdHAGTGMA ITIKPEATTN QDSYGGASVC IYCRSRVEHP DVDGLCKLRG KFVQVPLGIK DPVSYVLTHD VCQVCGFWRD GSCSCVGTGS QFQSKDTNFL NGFGVQV
>Q9J3E9_HOTLOOPS
1-16, 41-51, 223-230, 777-788, 826-858, 893-904, 995-1013, 1273-1283, 1341-1349, 1545-1556, 1758-1768, 1795-1803, 2110-2156, 2173-2181, 2650-2658, 2688-2696, 2813-2824, 3029-3040, 3336-3345, 3376-3385, 3629-3638, 4079-4091, 4205-4213, 4375-4385, 4449-4467
MGKYGLGFKW APEFPWmlpn aseklgsper seedgfcpsa AQEPKTKGKT Lvnhvrvncs rlpaleccvq saiirdifvd edpqkveast mmalqfgsav lvkpskrlsi qawtnlgvlp ktaamglfkr vclcntrecs cdahvafhlf tvqpdgvclg ngrfigwfvp vtaipeyakq wlqpwsillr kggnkgsvts ghfrravtmp vydfnvedac eeVHLNPKGK ysckayallk gyrgvkpilf vdqygcdytg clakgledyg dltlsemkel fpvwrdslds evlvawhvdr dpraamrlqt latvrcidyv gqptedvvdg dvvvrepahl laanaivkrl prlvetmlyt dssvtefcyk tklcecgfit qfgyvdccgd tcdfrgwvag nmmdgfpcpg ctknympwel eaqssgvipe ggvlftqstd tvnresfkly ghavvpfgsa vywspcpgmw lpviwssvks ysgltytgvv gckaivqetd aicrslymdy vqhkcgnleq railglddvy hrqllvnrgd yslllenvdl fvkrraefac kfatcgdglv pllldglvpr syyliksgqa ftsmmvnfsh evtdmcmdma llfmhdvkva tkyvkkvtgk lavrfkawgv avvrkitewf dlavdiaasa agwlcyqlvn glfavangvi tfvqevpelv knfvdkfkaf fkvlidsmsv silsgltvvk tasnrvclag skvyevvqks lsayvmpvgc seatclvgei epavfeddvv dvvkapLTYQ GCCKPPTSfe kicivdklym akcgdqfypv vvdndtvgvl dqcwrFPCAG KKVEFNDKPK VRKIPSTRKI KITFALDAtf dsvlskacse fevdkdvtld elldvvldav esTLSPCKEH DVIGtkvcal ldrlagdyvy lfdeggdevi aprmycsfsa pddedcvaad vvdadenqdd daedsavlva dtqeedgvak gqveadseic vahtGSQEEL AEPDAVGSQT PIAsaeetev geasdregia eakatvcada vdacpdqvea feiekvedsi ldelqtelna padktyedvl afdavcseal safyavpsde thfkvcgfys paiertncwl rstlivmqsl plefkdlemq klwlsykagy dqcfvdklvk svpksiirpq ggyvadfayf flsqcsfkay anwrclecdm elklqgldam ffygdvvshm ckcgnsmtll sadipytlhf gvrddkfcaf ytprkvfraa cavdvndchs maVVEGKQID GKVvtkfigd kfdfmvgygm tfsmspfela qlygscitpn vcfvkgdvik vvrlvnaevi VNPANGRMAh gagvagaiae kagsafiket sdmvkaqgvc qvgecyesag gklckkvlni vgpdarghgk qcyslleray qhinkcdnvv ttlisagifs vptdvsltyl lgvvtknvil vsnnqddfdv iekcqvtsva gtkalslqla knlcrdvkfv tnacsslfse scfvssydvl qevealrhdi qldddarvfv qanmDCLPTD WRLVNKfdsv dgvrtikyfe cpggifvssq gkkfgyvqng sfkeasvsqi rallankvdv lctvdgvnfr sccvaegevf gktlgsvfcd ginvtkvrcs aiykgkvffq ysdlseadlv avkdafgfde pqllkyytml gmckwpvvvc gnyfafkqsn nncyinvacl mlqhlslkfp kwqwqeawne frsgkplrfv slvlakgSFK FNEPSDSIdf mrvvlreadl sgatcnlefv ckcgVKQEQR KGVdavmhfg tldkgdlvrg yniactcgsk lvhctqfnvp flicsntpeg rklpddvvaa niftggsvgh ythvkckpky qlydacnvnk vseakgnftd clylknlkqt fssvlttfyl ddvkcveykp dlsqyycesg kyytkpiika qfrtfekvdg vytnfklvgh siaeklnakl gfdcnspfve ykitewptat gdvvlasddl yvsryssgci tfgkpvvwlg heeaslkslt yfnrpsvvce nkfnvlpvdv septdkgpvp aavlvtgvpg adasagagia keqkacasas vedqvvtevR QEPSVSAADV KEVKLNGVKK PVKVEGSVVV NDPTSETKVV KSLSIVdvyd mfltgckyvv wtANELSRLV Nsptvreyvk wgmgkivtpa kllllrdekq efvapkvvka kaiacycavk wfllycfswi kfntdnkviy ttevaskltf klcclafkna lqtfnwsvvs rgfflvatvf llwfnflyan vilsdfylpn igplptfvgq ivawfkttfg vsticdfyqv tdlgyrssfc ngsmvcelcf sgfdmldnyd ainvvqhvvd rrlsfdyisl fklvvelvig yslytvcfyp lfvligmqll ttwlpeffml etmhwsarlf vfvanmlpaf tllrfyivvt amykvyclcr hvmygcskpg clfcykrnrs vrvkcstvvg gslryydvma nggtgfctkh qwnclncnsw kpgntfithe aaadlskelk rpvnptdsay ysvtevkqvg csmrlfyerd gqrvyddvna slfvdmngll hskvkgvpet hvvvvenead kagflgaavf yaqslyrpml mvekklittA NTGLSVSRtm fdlyvdslln vldvdrkslt sfvnaahNSL KEGVQLeqvm dtfigcarrk caidsdvetk sitksvmsav nagvdftdes cnnlvptyvk sdtivaadlg vliqnnakhv qanvakaanv aciwsvdafn qlsadlqhrl rkacsktglk ikLTYNKQEA NVPIlttpfs lkggavfsrm lqwlfvanli cfivlwalmp tyavhksdmq lplyasfkvi dngvlrdvsv tdacfankfn qfdqwyestf glayyrnska cpvvvavidq dightlfnvp ttvlrygfhv lhfithafat dsvqcytphm qipydnfyas gcvlsslctm lahadgtphp ycytggvmhn aslysslaph vrynlassNG YIRFPEVVSE givrvvrtrs mtycrvglce eaeegicfnf nrswvlnnpy yrampgtfcg rnafdlihqv lgglvrpidf faltassvag ailaiivvla fyyliklkra fgdytsvvvi nvivwcinfl mlfvfqvypt lsclyacfyf yttlyfpsei svvmhlqwlv mygaimplwf ciiyvavvvs nhalwlfsyc rkigtevrsd gtfeemaltt fmitkesyck lknsvsdvaf nrylslynky ryfsgkmdta ayreaacsql akametfnhn ngndvlyqpp tasvttsflq sgivkMVSPT SKVEPcivsv tygnmtlngl wlddkvycpr hvicsSADMT DPDYPnllcr vtssdfcvms grmsltvmsy qmqgcqlvlt vtlqnpntpk ysfgvvkpge tftvlaayng rpqgafhvtl rsshtikgsf lcgscgsvgy vltgdsvrfv ymhqlelstg chtgtdfsgn fygpyrdaqv vqlpvqdytq tvnvvawlya aifnrcnwfv qsdscsleef nvwamtngfs sikadlvlda lasmtgvtve qvlaaikrlh sgfqgkqilg scvledeltp sdvyqqlaGV KLQSKRTRvi kgtccwilas tflfcsiisa fvkwtmfmyv tthmlgvtlc alcfvsfaml likhkhlylt myimpvlctl fytnylvvyk qsfrglayaw lshfvpavdy tymdevlygv vllvamvfvt mrsinhdvfs imflvgrlvs lvsmwyfgan leeevllflt slfgtytwtt mlslatakvi akwlavnvly ftdvpqiklv llsylcigyv cccywgilsl lnsifrmpfg vynykisvqe lrymnanglr pprnsfealm lnfkllgigg vpvievsqiq srltdvkcan vvllnclqhl hiasnsklwq ycstlhneil atsdlsvafd klaqllvvlf anpaavdskc lasieevsdd yvrdntvlqa lqsefvnmas fveyelakkn ldeakasgsa nqqqikqlek acniaksaye rdravarkle rmadlaltNM YKEARINDKK Skvvsalqtm lfsmvrkldn qalnsildna vkgcvplnai psltsntlti ivpdkqvfdq vvdnvyvtya gnvwhiqfiq dadgavkqln eidvnstwpl viaanrhnev stvvLQNNEL MPQklrtqvv nsgsdmncnt ptqcyynttg tgkivyails dcdglkytki vkedgncvvl eldppckfsv qdvkglkiky lyfvkgcntl argwvvgtls stvrlqagta teyacnsail slcafsvdpk ktyldyikqg gvpvtncvkm lcdhagtgma itikPEATTN QDSYGgasvc iycrsrvehp dvdglcklrg kfvqvplgik dpvsyvlthd vcqvcgfwrd gscscvgtGS QFQSKDTNFL NGFGVQV
>Q9J3E9_REM465
24-47, 956-963, 975-983, 996-1025, 2083-2104, 4034-4045
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| JOB-ID | Q9J3E9_121314Zvfy2n8AAQEAAGyvPy4AAAAD |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9J3E9 |
| Description | tr|Q9J3E9|Q9J3E9_9BETC Replicase polyprotein 1a OS=Murine hepatitis virus OX=11138 GN=ORF1A PE=3 SV=1 |
| Title/ID | none |
| Sequence length | 4467 |
| Download predictions | smoothed scores raw scores |