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>Q9QF35_LOOPS
1-123, 159-173, 199-210, 222-256, 293-315, 381-411, 419-434, 444-457, 471-628, 649-691, 808-818, 860-876, 904-915, 949-966, 974-984, 995-1028, 1052-1061, 1087-1133, 1140-1180, 1191-1246, 1272-1331, 1351-1399, 1424-1434, 1444-1457, 1466-1518, 1527-1539, 1546-1556, 1572-1585, 1599-1609, 1616-1642, 1686-1703, 1747-1758, 1780-1790, 1800-1808, 1819-1831, 1873-1895, 1907-1915, 1928-1944, 1966-1982, 1997-2083, 2097-2150, 2157-2185, 2194-2338, 2350-2474, 2479-2491, 2530-2548, 2570-2599, 2624-2639, 2652-2675, 2683-2690, 2702-2731, 2748-2756, 2766-2774, 2786-2803, 2809-2835, 2842-2855, 2892-2901, 2909-2922, 2933-2941, 2975-3008, 3026-3033
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKDRR STGKSWGKPG YPWPLYGNEG LGWAGWLLSP RGSRPSWGPN DPRHRSRNVG KVIdtltcgf adlmgyipvv gaplggvara lahgvrvlED GVNFATGNLP GCSfsiflla llscittpvs aaevknisTG YMVTNDCTND sitwqlqaav lHVPGCVPCE KVGNASQCWI PVSPNVAVQR PGALTQglrt hidmvvmsat lcsalyvgdl cggvmlaaqm fiVSPQHHWF VQDCNCSIYP GTITGhrmaw dmmmnwspta tmilayamrv peviidiisg ahwgvmfgla yfsmqgawak vvvilllaag VDARTHTVGG SAAQTTGRLT SLFDMGPRQK IqlvntngSW HINRTALNCN DSLHtgfias lfyTHSFNSS GCPERMSacr sieafrvgwg ALQYEDNVTN PEDMRPYCWH YPPRQCGVVS AKTVCGPVYC FTPSPVVVGT TDRLGAPTYT WGENETDVFL LNSTRPPLGS WFGCTWMNSS GYTKTCGAPP CRTRADFNAS TDLLCPTDCF RKHPDTTYLK CGSGPWLTPR CLIDYPYRLW HYPCTVNYti fkirmyvggv ehrltaacNF TRGDRCNLED RDRSQLSPLL HSTTEWAILP CSYSDLPALS Tgllhlhqni vdvqfmygls paltkyivrw ewvillflll adarvcaclw mlillgqaea aleklvilha asaascngfl yfviffvaaw yikgrvvpla tysltglwsf sllllalPQQ AYAYDASVhg qigaallvmi tlftltpgyk tllsrflwwl cylltlgeaM VQEWAPPMQV RGGRDGiiwa vaifypgvvf ditkwllavl gpaYLLKGAL TRVPYfvrah allrmctmar hlaggryvqm allalgrwTG TYIYDHLTPM SDWAASglrd lavAVEPIIF SPMEkkvivw gaetAACGDI LHGLPVSARL GREVLLGPAD GYTSKGWSll apitayaqqt rgllgtivvs mTGRDKTEQA Geiqvlstvt qsflgtsisg vlwtvyHGAG NKTLAGSRGP VTQMYSSAEG DLVGWPSPPG TKSLEPCTCG AVDlylvtrN ADVIPARRRG DKRGALLSPR PLSTLKGSSG GPVLCPRGHA vgvfraavcs RGVAKSIDFI PVETLDIVTR SPTFSDNSTP PAVPQTYQVG YLHAPTGSGK STKVPVayaa qgykvlvlnp svaatlgfga yLSKAHGINP NIRTGVRTVT TGAPITYSTY GKFLADGGCA GGAYDIIICD ECHAVDSTTI Lgigtvldqa etagvrltvl ATATPPGSVT TPHPNIEEVA LGQEGEIPFY GRAIPLSYIK GGRHLIFCHs kkkcdelaaa lrgmglnsva yyrGLDVSVI PTQGdvvvva tdaLMTGYTG DFDSVIDcnv avtqvVDFSL DPTFTITTQI VPQDAVSRSQ RRGRTGRGRL GIYRYVSTGE RASGMFDSvv lcecydAGAA WYELTPSETt vrlraYFNTP GLPVCQdhle fweavftglt hIDAHFLSQT KQSGEnfayl tayqatvcAR AKAPPPSWDv mwkclTRLKP TLVGPTPLLY RLGSVTNEVT LThpvtkyia tcmqadlevm tstwvlaggv laavaaycla tgcvcIIGRL HINQRAVVAP DKEvlyeafd emeecasraa lieegqriae mlkskiqgll qqaskqAQDI QPTVQASWpk veqfwakhmw nfisgiqylA GLSTLPGNPA vasmmafsaA LTSPLSTStt illnilggWL ASQIAPPAGA Tgfvvsglvg aavgsiglgk vlvdilagyg agisgalvaf kiMSGEKPSM EDVVNLLPGI LSPGAlvvgv icaailRRHV GPGEGavqwm nrliafaSRG NHVAPTHYVT ESDAsqrvtq llgsltitsl lrrlhNWITE DCPIPCGGSW LRdvwdwvct iltdfkNWLT SKLFPKMPGL PFVSCQKGYK GVWAGTGIMT TRCPCGANIS GNVRLGSMRI TGPKTCMNIW QGTFPINCYT EGQCVPKPAP NFKvaiwrva aseyaeVTQH GSYHYITGLT TDNLKVPCQL PSPEFFSWVD GVQIHRFAPT PKPFFRDEVS fcvglnSFVV GSQLPCDPEP DTDVLMSMLT DPSHItaeta arrLARGSPP SEASSSASQL SAPSLRATCT THGKAYDVDM VDANLFMGGD VTRIESGSKV VVLDSLDPMV EERSDLEPSI PSEYMLPKKR FPPALPAWAR PDYNPPLVES WKRPDYQPAT VAGCALPPPR KTPTPPPRRR RTVGLSEDsi gdalqqlaiK SFGQPPPSGD SGLSTGAGAA DSGSQTPPDE LALSETGSIS SMPPLEGELG DPDLEPEQVE PQPPPQGGVA APGSDSGSWS TCSEEDDSVV CCSMSYSWTG ALITPCSPEE EKLPINPLSN SLLRyhnkVY CTTTKSASLR Akkvtfdrmq vldsyydsvl kdiklaaskv tarlltmeeA CQLTPPHSAR SKYGFGAKev rslsgravnh iksvwkdllE DSETPIPTTI MAKNEVFCVD PTKGGKKAAr livypdlgvr vcekmalydi tqkLPQAVMG ASYGFQYSPa qrvefllkaw aEKKDPMGFS YDTRCFDSTV TERDIrtees iyRACSLPEE ahtaihslte rLYVGGPMFN SKGQTCGYRR CRASGVLTTS Mgntitcyvk alaackaAGI IAPTMLvcgd dlvviSESQG TEEDernlra fteamTRYSA PPGDPPRPEY DLElitscSS NVSVALGPQG RRRYYLTRDP TTPIAraawe tVRHSPVNSW LGNIIqyapt iwarmvlmth ffsilmaqdt ldqnlnfemy gAVYSVSPLD LpaiierlHG LDAFSLHTYT PHeltrvasa lrKLGAPPLR Awksraravr aslisrggra avcgrylfnw avktKLKLTP LPEARLLDLS SWFTVGAGGG DIYHSVSRar prlllfglll lfvgvGLFLL PAR
>Q9QF35_HOTLOOPS
1-81, 106-119, 385-406, 512-523, 596-608, 1140-1173, 1192-1202, 1211-1222, 1274-1292, 1353-1364, 1475-1515, 1939-1947, 2203-2214, 2265-2277, 2309-2332, 2482-2498, 2529-2544, 2568-2588, 2654-2674, 2767-2775, 2786-2795, 2811-2824, 2841-2852, 2934-2943, 2953-2962
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKDRR STGKSWGKPG Ypwplygneg lgwagwllsp rgsrpSWGPN DPRHRSRNVg kvidtltcgf adlmgyipvv gaplggvara lahgvrvled gvnfatgnlp gcsfsiflla llscittpvs aaevknistg ymvtndctnd sitwqlqaav lhvpgcvpce kvgnasqcwi pvspnvavqr pgaltqglrt hidmvvmsat lcsalyvgdl cggvmlaaqm fivspqhhwf vqdcncsiyp gtitghrmaw dmmmnwspta tmilayamrv peviidiisg ahwgvmfgla yfsmqgawak vvvilllaag vdarTHTVGG SAAQTTGRLT SLFDMGprqk iqlvntngsw hinrtalncn dslhtgfias lfythsfnss gcpermsacr sieafrvgwg alqyednvtn pedmrpycwh ypprqcgvvs aktvcgpvyc fTPSPVVVGT TDRlgaptyt wgenetdvfl lnstrpplgs wfgctwmnss gytktcgapp crtradfnas tdllcptdcf rkhpdTTYLK CGSGPWLTpr clidypyrlw hypctvnyti fkirmyvggv ehrltaacnf trgdrcnled rdrsqlspll hsttewailp csysdlpals tgllhlhqni vdvqfmygls paltkyivrw ewvillflll adarvcaclw mlillgqaea aleklvilha asaascngfl yfviffvaaw yikgrvvpla tysltglwsf sllllalpqq ayaydasvhg qigaallvmi tlftltpgyk tllsrflwwl cylltlgeam vqewappmqv rggrdgiiwa vaifypgvvf ditkwllavl gpayllkgal trvpyfvrah allrmctmar hlaggryvqm allalgrwtg tyiydhltpm sdwaasglrd lavavepiif spmekkvivw gaetaacgdi lhglpvsarl grevllgpad gytskgwsll apitayaqqt rgllgtivvs mtgrdkteqa geiqvlstvt qsflgtsisg vlwtvyhgag nktlagsrgp vtqmyssaeg dlvgwpsppg tkslepctcg avdlylvtrN ADVIPARRRG DKRGALLSPR PLSTLKGSSG GPVlcprgha vgvfraavcs rGVAKSIDFI PVetldivtr SPTFSDNSTP PAvpqtyqvg ylhaptgsgk stkvpvayaa qgykvlvlnp svaatlgfga ylsKAHGINP NIRTGVRTVT TGapitysty gkfladggca ggaydiiicd echavdstti lgigtvldqa etagvrltvl atATPPGSVT TPHPnieeva lgqegeipfy graiplsyik ggrhlifchs kkkcdelaaa lrgmglnsva yyrgldvsvi ptqgdvvvva tdalmtgytg dfdsvidcnv avtqvvdfsl dptfTITTQI VPQDAVSRSQ RRGRTGRGRL GIYRYVSTGE RASGMfdsvv lcecydagaa wyeltpsett vrlrayfntp glpvcqdhle fweavftglt hidahflsqt kqsgenfayl tayqatvcar akapppswdv mwkcltrlkp tlvgptplly rlgsvtnevt lthpvtkyia tcmqadlevm tstwvlaggv laavaaycla tgcvciigrl hinqravvap dkevlyeafd emeecasraa lieegqriae mlkskiqgll qqaskqaqdi qptvqaswpk veqfwakhmw nfisgiqyla glstlpgnpa vasmmafsaa ltsplststt illnilggwl asqiappaga tgfvvsglvg aavgsiglgk vlvdilagyg agisgalvaf kimsgekpsm edvvnllpgi lspgalvvgv icaailrrhv gpgegavqwm nrliafasrg nhvapthyVT ESDASQRvtq llgsltitsl lrrlhnwite dcpipcggsw lrdvwdwvct iltdfknwlt sklfpkmpgl pfvscqkgyk gvwagtgimt trcpcganis gnvrlgsmri tgpktcmniw qgtfpincyt egqcvpkpap nfkvaiwrva aseyaevtqh gsyhyitglt tdnlkvpcql pspeffswvd gvqihrfapt pkpffrdevs fcvglnsfvv gsqlpcdpep dtdvlmsmlt dpshitaeta arrlargspp seASSSASQL SAPSlratct thgkaydvdm vdanlfmggd vtriesgskv vvldsldpmv eersDLEPSI PSEYMLPkkr fppalpawar pdynpplves wkrpdyqpAT VAGCALPPPR KTPTPPPRRR RTvglsedsi gdalqqlaik sfgqpppsgd sglstgagaa dsgsqtppde lalsetgsis smpplegelg dpdlepeqve pqpppqggva apgsdsgsws tcseeddsvv ccsmsyswtg alitpcspee eklpinplsn sllryhnkvy cTTTKSASLR AKKVTFDRmq vldsyydsvl kdiklaaskv tarlltmeEA CQLTPPHSAR SKYGfgakev rslsgravnh iksvwkdLLE DSETPIPTTI MAKNEVFCvd ptkggkkaar livypdlgvr vcekmalydi tqklpqavmg asygfqyspa qrvefllkaw aekKDPMGFS YDTRCFDSTV TERDirtees iyracslpee ahtaihslte rlyvggpmfn skgqtcgyrr crasgvltts mgntitcyvk alaackaagi iaptmlvcgd dlvvisESQG TEEDErnlra fteamTRYSA PPGDPprpey dlelitscss NVSVALGPQG RRRYyltrdp ttpiaraawe TVRHSPVNSW LGniiqyapt iwarmvlmth ffsilmaqdt ldqnlnfemy gavysvspld lpaiierlhg ldafslhtyt pheltrvasa lrkLGAPPLR AWKsraravr asLISRGGRA AVcgrylfnw avktklkltp lpearlldls swftvgaggg diyhsvsrar prlllfglll lfvgvglfll par
>Q9QF35_REM465
1-17, 47-75, 1212-1221, 1484-1492, 1739-1755, 2191-2215, 2321-2333, 2355-2381, 2407-2437, 2768-2775
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKDRR STGKSwgkpg ypwplygneg lgwagwllsp rgsrpswgpn dprhrsrnvg kvidtltcgf adlmgyipvv gaplggvara lahgvrvled gvnfatgnlp gcsfsiflla llscittpvs aaevknistg ymvtndctnd sitwqlqaav lhvpgcvpce kvgnasqcwi pvspnvavqr pgaltqglrt hidmvvmsat lcsalyvgdl cggvmlaaqm fivspqhhwf vqdcncsiyp gtitghrmaw dmmmnwspta tmilayamrv peviidiisg ahwgvmfgla yfsmqgawak vvvilllaag vdarthtvgg saaqttgrlt slfdmgprqk iqlvntngsw hinrtalncn dslhtgfias lfythsfnss gcpermsacr sieafrvgwg alqyednvtn pedmrpycwh ypprqcgvvs aktvcgpvyc ftpspvvvgt tdrlgaptyt wgenetdvfl lnstrpplgs wfgctwmnss gytktcgapp crtradfnas tdllcptdcf rkhpdttylk cgsgpwltpr clidypyrlw hypctvnyti fkirmyvggv ehrltaacnf trgdrcnled rdrsqlspll hsttewailp csysdlpals tgllhlhqni vdvqfmygls paltkyivrw ewvillflll adarvcaclw mlillgqaea aleklvilha asaascngfl yfviffvaaw yikgrvvpla tysltglwsf sllllalpqq ayaydasvhg qigaallvmi tlftltpgyk tllsrflwwl cylltlgeam vqewappmqv rggrdgiiwa vaifypgvvf ditkwllavl gpayllkgal trvpyfvrah allrmctmar hlaggryvqm allalgrwtg tyiydhltpm sdwaasglrd lavavepiif spmekkvivw gaetaacgdi lhglpvsarl grevllgpad gytskgwsll apitayaqqt rgllgtivvs mtgrdkteqa geiqvlstvt qsflgtsisg vlwtvyhgag nktlagsrgp vtqmyssaeg dlvgwpsppg tkslepctcg avdlylvtrn adviparrrg dkrgallspr plstlkgssg gpvlcprgha vgvfraavcs rgvaksidfi pvetldivtr sPTFSDNSTP Pavpqtyqvg ylhaptgsgk stkvpvayaa qgykvlvlnp svaatlgfga ylskahginp nirtgvrtvt tgapitysty gkfladggca ggaydiiicd echavdstti lgigtvldqa etagvrltvl atatppgsvt tphpnieeva lgqegeipfy graiplsyik ggrhlifchs kkkcdelaaa lrgmglnsva yyrgldvsvi ptqgdvvvva tdalmtgytg dfdsvidcnv avtqvvdfsl dptftittqi vpqDAVSRSQ RRgrtgrgrl giyryvstge rasgmfdsvv lcecydagaa wyeltpsett vrlrayfntp glpvcqdhle fweavftglt hidahflsqt kqsgenfayl tayqatvcar akapppswdv mwkcltrlkp tlvgptplly rlgsvtnevt lthpvtkyia tcmqadlevm tstwvlaggv laavaaycla tgcvciigrl hinqravvap dkevlyeafd emeecasraa lieegqriae mlkskiqgLL QQASKQAQDI QPTVQaswpk veqfwakhmw nfisgiqyla glstlpgnpa vasmmafsaa ltsplststt illnilggwl asqiappaga tgfvvsglvg aavgsiglgk vlvdilagyg agisgalvaf kimsgekpsm edvvnllpgi lspgalvvgv icaailrrhv gpgegavqwm nrliafasrg nhvapthyvt esdasqrvtq llgsltitsl lrrlhnwite dcpipcggsw lrdvwdwvct iltdfknwlt sklfpkmpgl pfvscqkgyk gvwagtgimt trcpcganis gnvrlgsmri tgpktcmniw qgtfpincyt egqcvpkpap nfkvaiwrva aseyaevtqh gsyhyitglt tdnlkvpcql pspeffswvd gvqihrfapt pkpffrdevs fcvglnsfvv gsqlpcdpep dtdvlmsmlt dpshitaeta ARRLARGSPP SEASSSASQL SAPSLratct thgkaydvdm vdanlfmggd vtriesgskv vvldsldpmv eersdlepsi pseymlpkkr fppalpawar pdynpplves wkrpdyqpat vagcalpppr KTPTPPPRRR RTVglsedsi gdalqqlaik sfgqPPPSGD SGLSTGAGAA DSGSQTPPDE Lalsetgsis smpplegelg dpdlepEQVE PQPPPQGGVA APGSDSGSWS TCSEEDDsvv ccsmsyswtg alitpcspee eklpinplsn sllryhnkvy ctttksaslr akkvtfdrmq vldsyydsvl kdiklaaskv tarlltmeea cqltpphsar skygfgakev rslsgravnh iksvwkdlle dsetpiptti maknevfcvd ptkggkkaar livypdlgvr vcekmalydi tqklpqavmg asygfqyspa qrvefllkaw aekkdpmgfs ydtrcfdstv terdirtees iyracslpee ahtaihslte rlyvggpmfn skgqtcgyrr crasgvltts mgntitcyvk alaackaagi iaptmlvcgd dlvviseSQG TEEDErnlra fteamtrysa ppgdpprpey dlelitscss nvsvalgpqg rrryyltrdp ttpiaraawe tvrhspvnsw lgniiqyapt iwarmvlmth ffsilmaqdt ldqnlnfemy gavysvspld lpaiierlhg ldafslhtyt pheltrvasa lrklgapplr awksraravr aslisrggra avcgrylfnw avktklkltp lpearlldls swftvgaggg diyhsvsrar prlllfglll lfvgvglfll par
| JOB-ID | Q9QF35_022835ZwswU38AAQEAAGAGYXoAAAAW |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9QF35 |
| Description | tr|Q9QF35|Q9QF35_9HEPC Genome polyprotein OS=Hepatitis C virus subtype 2a OX=31649 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3033 |
| Download predictions | smoothed scores raw scores |