Download PostScript file
>Q9WI42_LOOPS
1-9, 17-82, 89-127, 165-226, 278-305, 313-326, 336-348, 368-379, 386-397, 404-420, 431-443, 456-471, 524-548, 566-575, 586-654, 660-668, 677-689, 701-749, 794-811, 819-851, 865-904, 927-940, 951-959, 973-1012
MTNLSDQTQq ivpfirSLLM PTTGPASIPD DTLEKHTLRS ETSTYNLTVG DTGSGLIVFF PGFPGSIVGA HYTLQGNGNY KFdqmlltAQ NLPASYNYCR LVSRSLTVRS STLPGGVYAL NGTINAVtfq gslseltdvs ynglmsatan indkignvlv gegvTVLSLP TSYDLGYVRL GDPIPAIGLD PKMVATCDSS DRPRVYTITA ADDYQFSSQY QPGGVTitlf sanidaitsl svggelvfrt svhglvlgat iyligfdgtt vitravaANN GLTTGTDNLM PFNLVIPTNE ITQPItsikl eiVTSKSGGQ AGDQMSwsar gslavTIHGG NYPGALRPvt lvayervatg svvtvagVSN FELIPNPELa knlvtEYGRF DPGAMNYtkl ilsERDRLGI KTVWPTREYT dfreyfmeva DLNSPLKIAG AFGfkdiira irriaVPVVS TLFPPAAPLA Haigegvdyl lgdeaqaasg taraasgkar aasgrirqlt laadkgyevv anlFQVPQNP VVDGILASPG VLRGAHNLdc vlregatlfp vvittVEDAM TPKALnskmf aviegVREDL QPPSQRGSFI RTLSGHRVYG YAPDGVLPLE TGRDYTVVPI DDVWDDSIML SKDPIPPIVG NSGNlaiayM DVFRPKVPih vamtgaLNAC GEIEKVSFRs tklatahrlg LRLAGPGAFD VNTGPNWATF IKRFPHNPRD WDRLPYLNLP YLPPNAGRQy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleENGIVTD MANFALSDPN AhrmrnflAN APQAGSKSQR AKYGTAGYGV EARGPTPEEA Qrekdtrisk kmetMGIYFA TPEWVALNGH RGPSPGQVKY WQNKREIPDP NEDYldyvha eksrlaseeq ilraatSIYG APGQAEPPQA fidevakvye INHGRGPNQe qmkdllltam emKHRNPRRA LPKPKPKPNA PTQRPPGRLG RWIRTVSDED LE
>Q9WI42_HOTLOOPS
1-8, 281-289, 366-377, 400-414, 492-503, 567-574, 587-597, 820-831, 837-854, 952-959, 977-1012
MTNLSDQTqq ivpfirsllm pttgpasipd dtlekhtlrs etstynltvg dtgsglivff pgfpgsivga hytlqgngny kfdqmlltaq nlpasynycr lvsrsltvrs stlpggvyal ngtinavtfq gslseltdvs ynglmsatan indkignvlv gegvtvlslp tsydlgyvrl gdpipaigld pkmvatcdss drprvytita addyqfssqy qpggvtitlf sanidaitsl svggelvfrt svhglvlgat iyligfdgtt vitravaann GLTTGTDNLm pfnlviptne itqpitsikl eivtsksggq agdqmswsar gslavtihgg nypgalrpvt lvayervatg svvtvAGVSN FELIPNPela knlvteygrf dpgamnytkL ILSERDRLGI KTVWptreyt dfreyfmeva dlnsplkiag afgfkdiira irriavpvvs tlfppaapla haigegvdyl lgdeaqaasg tARAASGKAR AASgrirqlt laadkgyevv anlfqvpqnp vvdgilaspg vlrgahnldc vlregatlfp vvittvEDAM TPKAlnskmf aviegvREDL QPPSQRGsfi rtlsghrvyg yapdgvlple tgrdytvvpi ddvwddsiml skdpippivg nsgnlaiaym dvfrpkvpih vamtgalnac geiekvsfrs tklatahrlg lrlagpgafd vntgpnwatf ikrfphnprd wdrlpylnlp ylppnagrqy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleengivtd manfalsdpn ahrmrnflaN APQAGSKSQR AkygtaGYGV EARGPTPEEA QREKdtrisk kmetmgiyfa tpewvalngh rgpspgqvky wqnkreipdp nedyldyvha eksrlaseeq ilraatsiyg apgqaeppqa fidevakvye iNHGRGPNQe qmkdllltam emkhrnPRRA LPKPKPKPNA PTQRPPGRLG RWIRTVSDED LE
>Q9WI42_REM465
1-8, 316-326, 487-504, 822-856, 976-995
MTNLSDQTqq ivpfirsllm pttgpasipd dtlekhtlrs etstynltvg dtgsglivff pgfpgsivga hytlqgngny kfdqmlltaq nlpasynycr lvsrsltvrs stlpggvyal ngtinavtfq gslseltdvs ynglmsatan indkignvlv gegvtvlslp tsydlgyvrl gdpipaigld pkmvatcdss drprvytita addyqfssqy qpggvtitlf sanidaitsl svggelvfrt svhglvlgat iyligfdgtt vitravaann glttgtdnlm pfnlviptne itqpitsikl eivtsKSGGQ AGDQMSwsar gslavtihgg nypgalrpvt lvayervatg svvtvagvsn felipnpela knlvteygrf dpgamnytkl ilserdrlgi ktvwptreyt dfreyfmeva dlnsplkiag afgfkdiira irriavpvvs tlfppaapla haigegvdyl lgdeaqAASG TARAASGKAR AASGrirqlt laadkgyevv anlfqvpqnp vvdgilaspg vlrgahnldc vlregatlfp vvittvedam tpkalnskmf aviegvredl qppsqrgsfi rtlsghrvyg yapdgvlple tgrdytvvpi ddvwddsiml skdpippivg nsgnlaiaym dvfrpkvpih vamtgalnac geiekvsfrs tklatahrlg lrlagpgafd vntgpnwatf ikrfphnprd wdrlpylnlp ylppnagrqy hlamaasefk etpelesavr ameaaanvdp lfqsalsvfm wleengivtd manfalsdpn ahrmrnflan aPQAGSKSQR AKYGTAGYGV EARGPTPEEA QREKDTrisk kmetmgiyfa tpewvalngh rgpspgqvky wqnkreipdp nedyldyvha eksrlaseeq ilraatsiyg apgqaeppqa fidevakvye inhgrgpnqe qmkdllltam emkhrNPRRA LPKPKPKPNA PTQRPpgrlg rwirtvsded le
| JOB-ID | Q9WI42_084353ZulBSX8AAQEAADCTmn4AAABN |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9WI42 |
| Description | sp|Q9WI42|POLS_IBDVB Structural polyprotein OS=Avian infectious bursal disease virus (strain Chicken/Cuba/Soroa/1998) OX=645118 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1012 |
| Download predictions | smoothed scores raw scores |