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>Q9WIJ1_LOOPS
30-37, 51-91, 122-167, 175-201, 209-219, 231-310, 316-351, 365-381, 399-415, 429-461, 474-486, 509-522, 533-544, 550-580, 588-627, 644-671, 684-734, 759-767, 774-785, 805-850, 861-872, 877-889, 930-942, 958-978, 995-1009, 1026-1046, 1060-1093, 1103-1166, 1174-1193, 1198-1226, 1242-1264, 1277-1289, 1300-1342, 1351-1380, 1398-1408, 1425-1447, 1496-1539, 1571-1604, 1611-1772, 1783-1866
mekvhvdiee dspflralqr sfpqfeveaK QVTDNDHana rafshlaskl IETEVDPSDT ILDIGSAPAR RMYSKHKYHC ICPMRCAEDP Drlykyatkl kknckeitdk eldkkmkela aVMSDPDLET ETMCLHDDES CRYEGQVAVY QDVYAVDGPT SLYHQANkgv rvayWIGFDT TPFMFKNLAG AYPSYSTNWA DetvltarNI GLCSSDVMEr srrgmsilrk KYLKPSNNVL FSVGSTIYHE KRDLLRSWHL PSVFHLRGKQ NYTCRCETIV SCDGYVVKRI AISPGLYGKP SGYAATMHRE gflccKVTDT LNGERVSFPV CTYVPATLCD QMTGILATDV Saddaqkllv glnqRIVVNG RTQRNTNTMK Nyllpvvaqa farwakeyKE DQEDERPLGL RDRQLvmgcc wafrrhkiTS IYKRPDTQTI IKVNSDFHSF VLPRIGSNTL Eiglrtrirk mleEHKEPSP LITAEDvqea kcaadeakev reaeelraAL PPLAADVEEP TLeadvdlml qeAGAGSVET PRGLikvtsY AGEDKIGSYA VLSPQAVLKS EKLSCIHPLA eqvivitHSG RKGRYAVEPY HGKVVVPEGH AIPVQDFQAL SESATIVyne refvnrylhh iatHGGALNT DEEYYKTVKP SEHDGEYLYD Idrkqcvkke lvtGLGLTGE LVDPPFHEFA YESLRTRPAA PYQVPTIGVY GVPGSGKSGI IKSAvtkkdl vvsakkenca eiirdvkkMK GLDVNARtvd svlLNGCKHP VETLYideaf achagtlral iaiiRPKKAV LCGDPKQCGF FNMMCLKVHF NHEICTQVFH KSISRRCTKS vtsvvstlfy DKKMRTTNPK ETkiviDTTG STKPKQDDLi ltcfrgwvkq lqidykgnei mtaaasqglt rkgvyavryK VNENPLYAPT SEhvnvlltr tedrivwKTL AGDPWIKTLT AKYPGNFTat ieewqaehda imrhILERPD PTDVFQNKAn vcwakalvpv lktagIDMTT EQWNTVDYFE TDKAHSaeiv lnqlcvrffG LDLDSGLFSA PTVPLSIRNN HWDNSPSPNM YGLnkevvrq lsRRYPQLPR AVATGRVYDM NTGTLRNYDP RINLVPVNRR LPHALVLHHN EHPQSDFSSF VSKLKGrtvl vvgEKLSVPG KMVDWLSDRP EATfrarLDL GIPGDVPKYD IIFVNVRTPY KYHHYQqced haiklsmltk kACLHLNPGG TCVSIGYGYA DRASesiiga iarqfkFSRV CKPKSSLEEt evlfvfigyD RKARTHNPYK LSSTLTNIYT GSRLHEAGCA PSYHVVRGDI ATategviin AANSKGQPGG GVCGALYKKF PESFDLQPIE vgkarlvkga akhiihaVGP NFNKVSEVeg dkqlaeayes iakiVNDNNY KSVAIPLLST GIFSGNKdrl tqslnhllta ldttdadvai ycrdkkwemt lkeavarrea veeicISDDS SVTEPDAELV RVHPKSSLAG RKGYSTSDGK TFSYLEGTKf hqaakdiaei namwpvatea neqvcmyilg ESMSSIRSKC PVEESEASTP PSTLPCLCIH AMTPervqrl KASRPEQITV CSSFPLPKYR ITGVQKIQCS QPILFSPKVP AYIHPRKYLV ETPPVDETPE PSAENQSTEG TPEQPPLITE DETRTRTPEP IIIEEEEEDS ISLLSDGPTH QVLQVEADIH GPPSVSSSSW SIPHASDFDV DSLSILDTLE GASVTSGATS AEtnsyfaks meFLARPVPA PRTVFRNPPH PAPRTRTPSL APSRACSRTS LVSTPPGVNR VITREELEAL TPSRTPSRSV SRTSLVSNPP GVNRVItree feafvaqqq
>Q9WIJ1_HOTLOOPS
1-16, 50-60, 122-129, 208-221, 228-239, 361-383, 400-414, 428-439, 444-462, 474-488, 533-543, 644-652, 685-694, 734-764, 839-889, 914-922, 932-943, 959-971, 1105-1132, 1172-1188, 1197-1208, 1278-1291, 1300-1312, 1351-1360, 1396-1405, 1459-1467, 1495-1528, 1666-1699, 1760-1771, 1791-1865
MEKVHVDIEE DSPFLRalqr sfpqfeveak qvtdndhana rafshlaskL IETEVDPSDT ildigsapar rmyskhkyhc icpmrcaedp drlykyatkl kknckeitdk eldkkmkela aVMSDPDLEt etmclhddes cryegqvavy qdvyavdgpt slyhqankgv rvaywigfdt tpfmfknlag aypsystnwa detvltaRNI GLCSSDVMER SrrgmsiLRK KYLKPSNNVl fsvgstiyhe krdllrswhl psvfhlrgkq nytcrcetiv scdgyvvkri aispglygkp sgyaatmhre gflcckvtdt lngervsfpv ctyvpatlcd qmtgilatdv saddaqkllv GLNQRIVVNG RTQRNTNTMK NYLlpvvaqa farwakeykE DQEDERPLGL RDRQlvmgcc wafrrhkITS IYKRPDTQTi ikvNSDFHSF VLPRIGSNTL EIglrtrirk mleEHKEPSP LITAEDVQea kcaadeakev reaeelraal pplaadveep tleadvdlml qeAGAGSVET PRGlikvtsy agedkigsya vlspqavlks eklscihpla eqvivithsg rkgryavepy hgkvvvpegh aipvqdfqal sesativyne refvnrylhh iatHGGALNT DEeyyktvkp sehdgeylyd idrkqcvkke lvtgLGLTGE LVDPpfhefa yeslrtrpaa pyqvptigvy gvpgsgksgi iksAVTKKDL VVSAKKENCA EIIRDVKKMK GLDVnartvd svllngckhp vetlyideaf achagtlral iaiirpkkav lcgdpkqcgf fnmmclkvhf nheictqvFH KSISRRCTKS VTSVVSTLFY DKKMRTTNPK ETKIVIDTTG STKPKQDDLi ltcfrgwvkq lqidykgnei mtaAASQGLT RKgvyavryk vNENPLYAPT SEHvnvlltr tedrivwkTL AGDPWIKTLT Akypgnftat ieewqaehda imrhilerpd ptdvfqnkan vcwakalvpv lktagidmtt eqwntvdyfe tdkahsaeiv lnqlcvrffg ldldsglfsa ptvplsirnn hwdnspspnm yglnkevvrq lsrrYPQLPR AVATGRVYDM NTGTLRNYDP RInlvpvnrr lphalvlhhn ehpqsdfssf vsklkgrtvl vVGEKLSVPG KMVDWLSDrp eatfraRLDL GIPGDVPKyd iifvnvrtpy kyhhyqqced haiklsmltk kaclhlnpgg tcvsigygya drasesiiga iarqfkfSRV CKPKSSLEET EvlfvfigyD RKARTHNPYK LSstltniyt gsrlheagca psyhvvrgdi atategviin AANSKGQPGG gvcgalykkf pesfdlqpie vgkarlvkga akhiiHAVGP NFNKVseveg dkqlaeayes iakivndnny ksvaipllst gifsgnkdrl tqslnhllTA LDTTDADvai ycrdkkwemt lkeavarrea veeiCISDDS SVTEPDAELV RVHPKSSLAG RKGYSTSDgk tfsylegtkf hqaakdiaei namwpvatea neqvcmyilg esmssirskc pveeseastp pstlpclcih amtpervqrl kasrpeqitv cssfplpkyr itgvqkiqcs qpilfspkvp ayihprkylv etppvDETPE PSAENQSTEG TPEQPPLITE DETRTRTPEp iiieeeeeds isllsdgpth qvlqveadih gppsvssssw siphasdfdv dslsildtlE GASVTSGATS Aetnsyfaks meflarpvpa PRTVFRNPPH PAPRTRTPSL APSRACSRTS LVSTPPGVNR VITREELEAL TPSRTPSRSV SRTSLVSNPP GVNRVitree feafvaqqq
>Q9WIJ1_REM465
397-406, 1576-1591, 1665-1686, 1732-1740, 1801-1823, 1840-1856
mekvhvdiee dspflralqr sfpqfeveak qvtdndhana rafshlaskl ietevdpsdt ildigsapar rmyskhkyhc icpmrcaedp drlykyatkl kknckeitdk eldkkmkela avmsdpdlet etmclhddes cryegqvavy qdvyavdgpt slyhqankgv rvaywigfdt tpfmfknlag aypsystnwa detvltarni glcssdvmer srrgmsilrk kylkpsnnvl fsvgstiyhe krdllrswhl psvfhlrgkq nytcrcetiv scdgyvvkri aispglygkp sgyaatmhre gflcckvtdt lngervsfpv ctyvpatlcd qmtgilatdv saddaqkllv glnqrivvng rtqrntntmk nyllpvvaqa farwakEYKE DQEDERplgl rdrqlvmgcc wafrrhkits iykrpdtqti ikvnsdfhsf vlprigsntl eiglrtrirk mleehkepsp litaedvqea kcaadeakev reaeelraal pplaadveep tleadvdlml qeagagsvet prglikvtsy agedkigsya vlspqavlks eklscihpla eqvivithsg rkgryavepy hgkvvvpegh aipvqdfqal sesativyne refvnrylhh iathggalnt deeyyktvkp sehdgeylyd idrkqcvkke lvtglgltge lvdppfhefa yeslrtrpaa pyqvptigvy gvpgsgksgi iksavtkkdl vvsakkenca eiirdvkkmk gldvnartvd svllngckhp vetlyideaf achagtlral iaiirpkkav lcgdpkqcgf fnmmclkvhf nheictqvfh ksisrrctks vtsvvstlfy dkkmrttnpk etkividttg stkpkqddli ltcfrgwvkq lqidykgnei mtaaasqglt rkgvyavryk vnenplyapt sehvnvlltr tedrivwktl agdpwiktlt akypgnftat ieewqaehda imrhilerpd ptdvfqnkan vcwakalvpv lktagidmtt eqwntvdyfe tdkahsaeiv lnqlcvrffg ldldsglfsa ptvplsirnn hwdnspspnm yglnkevvrq lsrrypqlpr avatgrvydm ntgtlrnydp rinlvpvnrr lphalvlhhn ehpqsdfssf vsklkgrtvl vvgeklsvpg kmvdwlsdrp eatfrarldl gipgdvpkyd iifvnvrtpy kyhhyqqced haiklsmltk kaclhlnpgg tcvsigygya drasesiiga iarqfkfsrv ckpkssleet evlfvfigyd rkarthnpyk lsstltniyt gsrlheagca psyhvvrgdi atategviin aanskgqpgg gvcgalykkf pesfdlqpie vgkarlvkga akhiihavgp nfnkvseveg dkqlaeayes iakivndnny ksvaipllst gifsgnkdrl tqslnhllta ldttdadvai ycrdkkwemt lkeavarrea veeicisdds svtepdaelv rvhpksslag rkgystsdgk tfsylegtkf hqaakdiaei namwpvatea neqvcmyilg esmssIRSKC PVEESEASTP Pstlpclcih amtpervqrl kasrpeqitv cssfplpkyr itgvqkiqcs qpilfspkvp ayihprkylv etppVDETPE PSAENQSTEG TPEQPPlite detrtrtpep iiieeeeeds isllsdgpth qvlqveadih gPPSVSSSSW siphasdfdv dslsildtle gasvtsgats aetnsyfaks meflarpvpa prtvfrnpph PAPRTRTPSL APSRACSRTS LVStppgvnr vitreeleaL TPSRTPSRSV SRTSLVsnpp gvnrvitree feafvaqqq
| JOB-ID | Q9WIJ1_220254Z@xijX8AAQEAAA-GDDoAAABE |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9WIJ1 |
| Description | tr|Q9WIJ1|Q9WIJ1_EEVVT Putative nonstructural polyprotein OS=Venezuelan equine encephalitis virus (strain Trinidad donkey) OX=11038 GN=NS PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1879 |
| Download predictions | smoothed scores raw scores |