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>Q9YV20_LOOPS
16-70, 80-107, 126-141, 148-182, 198-227, 244-315, 322-333, 341-351, 367-409, 465-477, 500-518, 538-549, 565-578, 585-619, 642-655, 661-670, 683-701, 737-745, 759-783, 797-810, 820-837, 851-864, 900-911, 940-977, 987-1003
ffrenlafqq rearkFSSEQ TRANSPTSRD LWDGGSDNLP SEAGAERQGT GPTLSFPQIT LWQRPLVTVK vggqlkealL DTGADDTVLE DINLPGKWRP KMIGGIGgfi kvkqydqisi eicgkKAIGT VLVGPTPVNI IgrnmltQIG CTLNFPISPI ETVPVKLKPG MDGPKVKQWP LTeekikalt eictemeKEG KISKIGPENP YNTPIFAIKK KDSNRWRklv dfrelnkrtq dfwEVQLGIP HPAGLKKKKS VTVLDVGDAY FSVPLDESFR KYTAFTIPST NNETPGIRYQ YNVLPQGWKG SPSIFqssmt kILEPFRSKN PEIiiyqymd DLYVGSDLEI Gqhrtkieel rahllsWGLT TPDKKHQKEP PFLWMGYELH PDKWTVQPIN LPEKESWTVn diqklvgkln wasqiyagik vkqlckllrg akaltdivtl teeaelelae nreiLKAPVH GVYYDPSkdl iaeiqkqgqd qwtyqiyqeP FKNLKTGKYA RKRSAHTNdv kqlaevvqkv vmesiviWGK TPKFKVPIQk etwetwwmey wqatWIPEWE FVNTPPLVkl wyqlEKDPIA GAETFYVDGA ANRETKLGKA GYVTDRGRQk vvsltettnq ktevhaihla lQDSGSEVNI VTDSQyalgi IQAQPDSSES elvnqiiekl igKDKVYLSW VPAHKGIGGN Eqvdklvssg irkvlfldgi dkaqeehery hsnwraMASD FNLPPviake ivascnkcQL KGEAMHGQVD CSPGMWQLDC THLegkvilv avhvasGYIE AEVIPAETGQ etayfllklA GRWPVKVVHT DNGSNFTsaa fkaacwwanv QQEYGIPYNP QSQGvvesmn kelkkiigqv reqaehlkta vqmavfihnF KRKGGIGGYS Ageriidiia tdiqtkelqk qitkiqnfrV YYRDSRDPIW KGPAKLLWKG EGAVVIQDNS DIKVVPRrka kiirdyGKQM AGDDCVAGRQ DED
>Q9YV20_HOTLOOPS
1-35, 79-103, 162-183, 198-226, 235-261, 286-296, 458-468, 536-548, 596-619, 625-633, 640-648, 933-948, 959-978, 983-1003
FFRENLAFQQ REARKFSSEQ TRANSPTSRD LWDGGsdnlp seagaerqgt gptlsfpqit lwqrplvtvk vggqlkeaLL DTGADDTVLE DINLPGKWRP KMIggiggfi kvkqydqisi eicgkkaigt vlvgptpvni igrnmltqig ctlnfpispi eTVPVKLKPG MDGPKVKQWP LTEekikalt eictemeKEG KISKIGPENP YNTPIFAIKK KDSNRWrklv dfreLNKRTQ DFWEVQLGIP HPAGLKKKKS Vtvldvgday fsvpldesfr kytafTIPST NNETPGiryq ynvlpqgwkg spsifqssmt kilepfrskn peiiiyqymd dlyvgsdlei gqhrtkieel rahllswglt tpdkkhqkep pflwmgyelh pdkwtvqpin lpekeswtvn diqklvgkln wasqiyagik vkqlckllrg akaltdivtl teeaeleLAE NREILKAPvh gvyydpskdl iaeiqkqgqd qwtyqiyqep fknlktgkya rkrsahtndv kqlaevvqkv vmesiVIWGK TPKFKVPIqk etwetwwmey wqatwipewe fvntpplvkl wyqlekdpia gaetfYVDGA ANRETKLGKA GYVTDRGRQk vvslTETTNQ KTEvhaihlA LQDSGSEVni vtdsqyalgi iqaqpdsses elvnqiiekl igkdkvylsw vpahkgiggn eqvdklvssg irkvlfldgi dkaqeehery hsnwramasd fnlppviake ivascnkcql kgeamhgqvd cspgmwqldc thlegkvilv avhvasgyie aevipaetgq etayfllkla grwpvkvvht dngsnftsaa fkaacwwanv qqeygipynp qsqgvvesmn kelkkiigqv reqaehlkta vqmavfihnf krkggiggys ageriidiia tdiqtkelqk qiTKIQNFRV YYRDSRDPiw kgpakllwKG EGAVVIQDNS DIKVVPRRka kiIRDYGKQM AGDDCVAGRQ DED
>Q9YV20_REM465
1-29, 41-50, 926-935, 970-1003
FFRENLAFQQ REARKFSSEQ TRANSPTSRd lwdggsdnlp SEAGAERQGT gptlsfpqit lwqrplvtvk vggqlkeall dtgaddtvle dinlpgkwrp kmiggiggfi kvkqydqisi eicgkkaigt vlvgptpvni igrnmltqig ctlnfpispi etvpvklkpg mdgpkvkqwp lteekikalt eictemekeg kiskigpenp yntpifaikk kdsnrwrklv dfrelnkrtq dfwevqlgip hpaglkkkks vtvldvgday fsvpldesfr kytaftipst nnetpgiryq ynvlpqgwkg spsifqssmt kilepfrskn peiiiyqymd dlyvgsdlei gqhrtkieel rahllswglt tpdkkhqkep pflwmgyelh pdkwtvqpin lpekeswtvn diqklvgkln wasqiyagik vkqlckllrg akaltdivtl teeaelelae nreilkapvh gvyydpskdl iaeiqkqgqd qwtyqiyqep fknlktgkya rkrsahtndv kqlaevvqkv vmesiviwgk tpkfkvpiqk etwetwwmey wqatwipewe fvntpplvkl wyqlekdpia gaetfyvdga anretklgka gyvtdrgrqk vvsltettnq ktevhaihla lqdsgsevni vtdsqyalgi iqaqpdsses elvnqiiekl igkdkvylsw vpahkgiggn eqvdklvssg irkvlfldgi dkaqeehery hsnwramasd fnlppviake ivascnkcql kgeamhgqvd cspgmwqldc thlegkvilv avhvasgyie aevipaetgq etayfllkla grwpvkvvht dngsnftsaa fkaacwwanv qqeygipynp qsqgvvesmn kelkkiigqv reqaehlkta vqmavfihnf krkggiggys ageriidiia tdiqtKELQK QITKIqnfrv yyrdsrdpiw kgpakllwkg egavviqdnS DIKVVPRRKA KIIRDYGKQM AGDDCVAGRQ DED
| JOB-ID | Q9YV20_112703Zt7bhn8AAQEAABRfHR4AAABY |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | Q9YV20 |
| Description | tr|Q9YV20|Q9YV20_9HIV1 Pol protein (Fragment) OS=Human immunodeficiency virus 1 OX=11676 GN=pol PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 1003 |
| Download predictions | smoothed scores raw scores |