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>U3N977_LOOPS
1-11, 99-108, 136-155, 164-237, 249-256, 287-307, 318-330, 355-408, 435-491, 508-523, 530-538, 559-579, 599-611, 618-649, 664-695, 712-724, 790-814, 823-831, 843-851, 884-895, 911-955, 963-973, 1008-1133, 1142-1152, 1208-1217, 1305-1314, 1366-1379, 1395-1405, 1432-1469, 1482-1491, 1503-1525, 1559-1599, 1606-1665, 1673-1690, 1696-1708, 1743-1761, 1772-1802, 1820-1852, 1858-1872, 1896-1910, 1918-1953, 1964-1993, 2002-2032, 2062-2084, 2092-2105, 2119-2127, 2135-2143, 2199-2207, 2242-2253, 2275-2283, 2291-2314, 2332-2341, 2354-2363, 2426-2442, 2460-2467, 2521-2535, 2572-2586, 2598-2619, 2628-2647, 2657-2685, 2700-2710, 2730-2745, 2772-2805, 2819-2849, 2858-2901, 2918-2926, 2954-2962, 2982-3001, 3019-3042, 3052-3074, 3110-3120, 3125-3133, 3155-3178, 3191-3208, 3225-3244, 3252-3283, 3315-3339, 3353-3386, 3421-3433
MSKKPGGPGK Sravnmlkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkelgt ltsainrrSS KQKKRGGKtg iavmiglias vgavtlsnfq gkvmmTVNAT DVTDVITIPT AAGKNlcivr amdVGYMCDD TITYECPVLS AGNDPEDIDC WCTKSAVYVR YGRCTKTRHS RRSRRSLTVQ THGESTLANK KGAWMDStka trylvkteSW ILRNPGyalv aavigwmlgs ntmqrvvfvv llllvaPAYS FNCLGMSNRD FLEGVSGatw vdlvlegDSC VTIMSKDKPT idvkmmnmea anlaevrsyc ylatVSDLST KAACPTMGEA HNDKRADPAF VCRQGVVDRG WGNGCGLFGK GSIDTCAKfa cstkaigrti lkenikyeva ifvhGPTTVE SHGNYSTQAG ATQAGRFSIT PAAPSYTLKL GEYGEVTVDC EPRSGIDTNA Yyvmtvgtkt flvhrewFMD LNLPWSSAGS TVWrnretlM EFEEPHATkq svialgsqeg alhqalagAI PVEFSSNTVK LTSGHLKCRv kmeklqlkgt tygvcskaFK FLGTPADTGH GtvvlelQYT GTDGPCKVPI SSVASLNDLT PVGRLVTVNp fvsvatanak vliELEPPFG DSYIVVGRGE QQINHHWHKS GSSIGkaftt tlkgaqrlaa lGDTAWDFGS VGGVftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvH ADTGCAIDIS RQELRCGSGV FIHNdveawm drYKYYPETP Qglakiiqka hkEGVCGLRS Vsrlehqmwe avkdelntll kengvdlsvv vekQEGMYKS APKRLtatte kleigwkawg KSILFAPELA NNTFVVDGPE TKECPTQNRA WNSLEVEDFG FGLTStrmfl kvRESNTTEC DSKiigtavk nnlaihsdls ywiesrlndt wkleravLGE VKSCTWPETH TLWGDGILES DLIIPVTLAG PRSNHNRRPG YKTQNQGPWD EGRVEIDFDY CPGTTVTLSE SCGHRGPATR TTTESGKLIT DWCCRSCTLP PLRYQTDSGC WYGMEIRPQR HDEktlvqsq vNAYNADMID PFqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry iilvgaaFAE SNSGGDVvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalLTPGLR CLNLdvyril llmvgigsli kekrsaaakk kgasllclal astglfnpmi laaglIACDP NRKRGWPATe vmtavglmfa ivggLAELDI DSMAIpmtia glmfaafvis gkstdmwier tADISWESDA EITGSSERVD VRLDDDGNFQ LMNDPGAPWk iwmlrmvcla iSAYTPWAIL Psvvgfwitl qyTKRGGVLW DTPSPKEYKK GDTTTgvyri mtrgllgsyq agagvmvegv fhtlwhttKG AALMSGEGRL DPYWGSVKED RLCYGGPWKL QHKWNGQDEv qmivvEPGKN VKNVQTKPGV FKTPEGEIGA VTLDFPTGTS GSPIVDKNGD VIGLYGNGVI MPNGSyisai vqGERMDEPI PAGFEPEMLR kkqitVLDLH PGAGKTRRil pqiikeainr rlrtavlapt rvvaaemaea lrGLPIRYQT SAVPREHNGN Eivdvmchat lTHRLMSPHR VPNYNLFVMD EAHFTDPASI AArgyistkv elgeaaaifM TATPPGTSDP FPESNSPISD LQTEIPDRAW NSgyewiTEY TGKTVWFVPS VKmgneialc lqragkkvvq lnrksYETEY PKCKNDDWDF vittdisEMG ANFKASRVID SRKSVKPTII TEGEGRVILG EPSavtaasa aqrRGRIGRN PSQVGDEYCY GGHTNEDDSN FAHwtearim lDNINMPNGL IAQFYQPERE KVYTMDGEYR LRgeerknfl ellrtadlpv wlaykvaaag vSYHDRRWCF DGPRTNTILE DNNEvevitk lGERKILRPR WIDARvysdh qalkafkdFA SGKRSQIgli evlgKMPEHF MGKtwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrKG IGKIGLGgav lgvatffcwm aevpgtkiag mlllslllmi vLIPEPEKQR SQTdnqlavf licvmtlvsa vaanEMGWLD KTKsdisslf GQRIEVKENF SMGEFLLDLR PATAwslyav ttavltpllk hLITSDYINT Sltsinvqas alfTLARGFP FVDvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdGIVAT DVPELERTTP IMqkkvgqim lilvslaavV VNPSVKTvre agilitaaav tlwengassv wnattaiglc himrggwlsc lsmtwtlikn MEKPGLKRGG AKGRTlgevw kerlnqmtke eftryrkeai ievdrsaakh aRKEGNVTGG HPVSRGtakl rwlverrFLE PVGKVIDLGC GRGGWCYYMa tqkrvqeVRG YTKGGPGHEE PQLVQSYgwn ivtmksGVDV FYRPSECCDT LLCDIGESSS SAEVEehrti rvlemvedwL HRGPREFCVK vlcpympkvi ekmellqrrY GGGLVRNPLS RNSTHemywv srasgnvvhs vnmtsqvllg rMEKRTWKGP QYEEDVNLGS GTRAVGKPLL NSDTSkiknr ierlrreySS TWHHDENHPY RTWNYHGSYD VKPTGSASSl vngvvrlLSK PWDTITNVTT MAMTDTTPFG QQRVFKEKVD TKAPEPPEGV Kyvlnettnw lwaflarEKR PRMCSReefi rkvnsnaalg amfeeqnqwr sarEAVEDPK FWemvdeere ahlrgechtc iYNMMGKREK KPGEFGKAKG Sraiwfmwlg arflefeaLG FLNEDHWLGR KNSGGGVEGL GLqklgyilr eVGTRPGGKI YADDTAGWDT RITRadlene akvlelldge hrrlaraiie ltyrhkvvkV MRPAADGRTV mdviSREDQR GSGqvvtyal ntftnlavql vrmmEGEGVI GPDDVEKLTK GKGPKVRTwl fengeerlsr MAVSGDDCVV KPLDDRFAts lhflnamskv rkdiQEWKPS TGWYDWQQVP FCSNhfteli mKDGRTLVVP CRGQDELVGR ARISPGAGWN VRDtaclaks yaqmwlllyf hrrdlrlman aicsAVPVNW VPTGRTTWSI HAGGEWMTTe dmlevwnrvw ieENEWMEDK TPVEKWSDVP YSGKREDIWC GSLIGTrara twaeniqvai nqvraiigde kyvdymsslk RYEDTTLVED TVL
>U3N977_HOTLOOPS
1-17, 88-109, 145-156, 195-237, 370-378, 483-492, 881-899, 933-946, 1040-1063, 1077-1100, 1433-1451, 1505-1526, 1607-1628, 1696-1710, 1896-1907, 1920-1953, 1960-1973, 2073-2101, 2116-2124, 2521-2539, 2566-2587, 2675-2688, 2774-2809, 2817-2832, 2888-2904, 3053-3070, 3099-3121, 3159-3178, 3268-3280, 3317-3325, 3331-3339, 3354-3375, 3419-3433
MSKKPGGPGK SRAVNMLkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkeLGT LTSAINRRSS KQKKRGGKTg iavmiglias vgavtlsnfq gkvmmtvnat dvtdVITIPT AAGKNLcivr amdvgymcdd tityecpvls agndpedidc wctkSAVYVR YGRCTKTRHS RRSRRSLTVQ THGESTLANK KGAWMDStka trylvktesw ilrnpgyalv aavigwmlgs ntmqrvvfvv llllvapays fnclgmsnrd flegvsgatw vdlvlegdsc vtimskdkpt idvkmmnmea anlaevrsyc ylatvsdlst kaacptmgeA HNDKRADPaf vcrqgvvdrg wgngcglfgk gsidtcakfa cstkaigrti lkenikyeva ifvhgpttve shgnystqag atqagrfsit paapsytlkl geygevtvdc epRSGIDTNA YYvmtvgtkt flvhrewfmd lnlpwssags tvwrnretlm efeephatkq svialgsqeg alhqalagai pvefssntvk ltsghlkcrv kmeklqlkgt tygvcskafk flgtpadtgh gtvvlelqyt gtdgpckvpi ssvaslndlt pvgrlvtvnp fvsvatanak vlieleppfg dsyivvgrge qqinhhwhks gssigkaftt tlkgaqrlaa lgdtawdfgs vggvftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvh adtgcaidis rqelrcgsgv fihndveawm drykyypetp qglakiiqka hkegvcglrs vsrlehqmwe avkdelntll kengvdlsvv VEKQEGMYKS APKRLTATTe kleigwkawg ksilfapela nntfvvdgpe tkECPTQNRA WNSLEVedfg fgltstrmfl kvresnttec dskiigtavk nnlaihsdls ywiesrlndt wkleravlge vksctwpeth tlwgdgiles dliipvtlaG PRSNHNRRPG YKTQNQGPWD EGRveidfdy cpgttvTLSE SCGHRGPATR TTTESGKLIT dwccrsctlp plryqtdsgc wygmeirpqr hdektlvqsq vnaynadmid pfqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry iilvgaafae snsggdvvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalltpglr clnldvyril llmvgigsli kekrsaaakk kgasllclal astglfnpmi laagliacdp nrkrgwpate vmtavglmfa ivgglaeldi dsmaipmtia glmfaafvis gkstdmwier taDISWESDA EITGSSERVD Vrldddgnfq lmndpgapwk iwmlrmvcla isaytpwail psvvgfwitl qytkRGGVLW DTPSPKEYKK GDTTTGvyri mtrgllgsyq agagvmvegv fhtlwhttkg aalmsgegrl dpywgsvked rlcyggpwkl qhkwngqdev qmivvePGKN VKNVQTKPGV FKTPEGEIga vtldfptgts gspivdkngd viglygngvi mpngsyisai vqgermdepi pagfepemlr kkqitVLDLH PGAGKTRRIL pqiikeainr rlrtavlapt rvvaaemaea lrglpiryqt savprehngn eivdvmchat lthrlmsphr vpnynlfvmd eahftdpasi aargyistkv elgeaaaifm tatppgtsdp fpesnspisd lqteipdraw nsgyewitey tgktvwfvps vkmgneialc lqragkkvvq lnrksYETEY PKCKNDDwdf vittdisemG ANFKASRVID SRKSVKPTII TEGEGRVILG EPSavtaasA AQRRGRIGRN PSQvgdeycy gghtneddsn fahwtearim ldninmpngl iaqfyqpere kvytmdgeyr lrgeerknfl ellrtadlpv wlaykvaaag vsyhdrrwcf dgPRTNTILE DNNEVEVITK LGERKILRPR Widarvysdh qalkaFKDFA SGKRsqigli evlgkmpehf mgktwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrkg igkiglggav lgvatffcwm aevpgtkiag mlllslllmi vlipepekqr sqtdnqlavf licvmtlvsa vaanemgwld ktksdisslf gqrievkenf smgeflldlr patawslyav ttavltpllk hlitsdyint sltsinvqas alftlargfp fvdvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdgivat dvpelerttp imqkkvgqim lilvslaavv vnpsvktvre agilitaaav tlwengassv wnattaiglc himrggwlsc lsmtwtlikn MEKPGLKRGG AKGRTLGEVw kerlnqmtke eftryrkeai ievdrSAAKH ARKEGNVTGG HPVSRGTakl rwlverrfle pvgkvidlgc grggwcyyma tqkrvqevrg ytkggpghee pqlvqsygwn ivtmksgvdv fyrpseccdt llcdIGESSS SAEVEEHRti rvlemvedwl hrgprefcvk vlcpympkvi ekmellqrry ggglvrnpls rnsthemywv srasgnvvhs vnmtsqvllg rmeKRTWKGP QYEEDVNLGS GTRAVGKPLL NSDTSKIKNr ierlrrEYSS TWHHDENHPY RTwnyhgsyd vkptgsassl vngvvrllsk pwdtitnvtt mamtdttpfg qqrvfkeKVD TKAPEPPEGV KYVLnettnw lwaflarekr prmcsreefi rkvnsnaalg amfeeqnqwr sareavedpk fwemvdeere ahlrgechtc iynmmgkrek kpgefgkakg sraiwfmwlg arflefealg flnedhwlgr knsgggvegl glqklgyilr evGTRPGGKI YADDTAGWDT ritradlene akvlelldge hrrlaraiIE LTYRHKVVKV MRPAADGRTV Mdvisredqr gsgqvvtyal ntftnlavql vrmmegegVI GPDDVEKLTK GKGPKVRTwl fengeerlsr mavsgddcvv kplddrfats lhflnamskv rkdiqewkps tgwydwqqvp fcsnhfteli mkdgrtlvvp crgqdelVGR ARISPGAGWN vrdtaclaks yaqmwlllyf hrrdlrlman aicsavPVNW VPTGRttwsi HAGGEWMTTe dmlevwnrvw ieeNEWMEDK TPVEKWSDVP YSGKRediwc gsligtrara twaeniqvai nqvraiigde kyvdymssLK RYEDTTLVED TVL
>U3N977_REM465
1-10, 97-107, 205-223, 1080-1092, 1333-1341, 1826-1837, 1955-1965, 2565-2582, 2678-2686
MSKKPGGPGK sravnmlkrg mprvlsligl kramlslidg kgpirfvlal laffrftaia ptravldrwr gvnkqtamkh llsfkkelgt ltsainRRSS KQKKRGGktg iavmiglias vgavtlsnfq gkvmmtvnat dvtdvitipt aagknlcivr amdvgymcdd tityecpvls agndpedidc wctksavyvr ygrcTKTRHS RRSRRSLTVQ THGestlank kgawmdstka trylvktesw ilrnpgyalv aavigwmlgs ntmqrvvfvv llllvapays fnclgmsnrd flegvsgatw vdlvlegdsc vtimskdkpt idvkmmnmea anlaevrsyc ylatvsdlst kaacptmgea hndkradpaf vcrqgvvdrg wgngcglfgk gsidtcakfa cstkaigrti lkenikyeva ifvhgpttve shgnystqag atqagrfsit paapsytlkl geygevtvdc eprsgidtna yyvmtvgtkt flvhrewfmd lnlpwssags tvwrnretlm efeephatkq svialgsqeg alhqalagai pvefssntvk ltsghlkcrv kmeklqlkgt tygvcskafk flgtpadtgh gtvvlelqyt gtdgpckvpi ssvaslndlt pvgrlvtvnp fvsvatanak vlieleppfg dsyivvgrge qqinhhwhks gssigkaftt tlkgaqrlaa lgdtawdfgs vggvftsvgk avhqvfggaf rslfggmswi tqgllgalll wmginardrs ialtflavgg vllflsvnvh adtgcaidis rqelrcgsgv fihndveawm drykyypetp qglakiiqka hkegvcglrs vsrlehqmwe avkdelntll kengvdlsvv vekqegmyks apkrltatte kleigwkawg ksilfapela nntfvvdgpe tkecptqnra wnslevedfg fgltstrmfl kvresnttec dskiigtavk nnlaihsdls ywiesrlndt wkleravlge vksctwpeth tlwgdgiles dliipvtlag prsnhnrrpg yktqnqgpwd egrveidfdy cpgttvtlsE SCGHRGPATR TTtesgklit dwccrsctlp plryqtdsgc wygmeirpqr hdektlvqsq vnaynadmid pfqlgllvvf latqevlrkr wtakismpai liallvlvfg gitytdvlry iilvgaafae snsggdvvhl almatfkiqp vfmvasflka rwtnqenill mlaavffqma yhdarqillw eipdvlnsla vawmilrait ftttsnvvvp llalltpglr clnldvyril llmvgigsli keKRSAAAKK Kgasllclal astglfnpmi laagliacdp nrkrgwpate vmtavglmfa ivgglaeldi dsmaipmtia glmfaafvis gkstdmwier tadiswesda eitgsservd vrldddgnfq lmndpgapwk iwmlrmvcla isaytpwail psvvgfwitl qytkrggvlw dtpspkeykk gdtttgvyri mtrgllgsyq agagvmvegv fhtlwhttkg aalmsgegrl dpywgsvked rlcyggpwkl qhkwngqdev qmivvepgkn vknvqtkpgv fktpegeiga vtldfptgts gspivdkngd viglygngvi mpngsyisai vqgermdepi pagfepemlr kkqitvldlh pgagktrril pqiikeainr rlrtavlapt rvvaaemaea lrglpiryqt savprehngn eivdvmchat lthrlmsphr vpnynlfvmd eahftdpasi aargyistkv elgeaaaifm tatppGTSDP FPESNSPisd lqteipdraw nsgyewitey tgktvwfvps vkmgneialc lqragkkvvq lnrksyetey pkcknddwdf vittdisemg anfkasrvid srksvkptii tegegrvilg epsaVTAASA AQRRGrigrn psqvgdeycy gghtneddsn fahwtearim ldninmpngl iaqfyqpere kvytmdgeyr lrgeerknfl ellrtadlpv wlaykvaaag vsyhdrrwcf dgprtntile dnnevevitk lgerkilrpr widarvysdh qalkafkdfa sgkrsqigli evlgkmpehf mgktwealdt myvvataekg grahrmalee lpdalqtial iallsvmtmg vffllmqrkg igkiglggav lgvatffcwm aevpgtkiag mlllslllmi vlipepekqr sqtdnqlavf licvmtlvsa vaanemgwld ktksdisslf gqrievkenf smgeflldlr patawslyav ttavltpllk hlitsdyint sltsinvqas alftlargfp fvdvgvsall laagcwgqvt ltvtvtaatl lfchyaymvp gwqaeamrsa qrrtaagimk navvdgivat dvpelerttp imqkkvgqim lilvslaavv vnpsvktvre agilitaaav tlwengassv wnattaiglc himrggwlsc lsmtwtlikn mekpglkrgg akgrtlgevw kerlnqmtke eftryrkeai ievdRSAAKH ARKEGNVTGG HPvsrgtakl rwlverrfle pvgkvidlgc grggwcyyma tqkrvqevrg ytkggpghee pqlvqsygwn ivtmksgvdv fyrpseccdt llcdigeSSS SAEVEEhrti rvlemvedwl hrgprefcvk vlcpympkvi ekmellqrry ggglvrnpls rnsthemywv srasgnvvhs vnmtsqvllg rmekrtwkgp qyeedvnlgs gtravgkpll nsdtskiknr ierlrreyss twhhdenhpy rtwnyhgsyd vkptgsassl vngvvrllsk pwdtitnvtt mamtdttpfg qqrvfkekvd tkapeppegv kyvlnettnw lwaflarekr prmcsreefi rkvnsnaalg amfeeqnqwr sareavedpk fwemvdeere ahlrgechtc iynmmgkrek kpgefgkakg sraiwfmwlg arflefealg flnedhwlgr knsgggvegl glqklgyilr evgtrpggki yaddtagwdt ritradlene akvlelldge hrrlaraiie ltyrhkvvkv mrpaadgrtv mdvisredqr gsgqvvtyal ntftnlavql vrmmegegvi gpddvekltk gkgpkvrtwl fengeerlsr mavsgddcvv kplddrfats lhflnamskv rkdiqewkps tgwydwqqvp fcsnhfteli mkdgrtlvvp crgqdelvgr arispgagwn vrdtaclaks yaqmwlllyf hrrdlrlman aicsavpvnw vptgrttwsi haggewmtte dmlevwnrvw ieenewmedk tpvekwsdvp ysgkrediwc gsligtrara twaeniqvai nqvraiigde kyvdymsslk ryedttlved tvl
| JOB-ID | U3N977_125120Zt7vSH8AAQEAABReAjoAAAAL |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | U3N977 |
| Description | tr|U3N977|U3N977_WNV Genome polyprotein OS=West Nile virus OX=11082 PE=4 SV=1 |
| Title/ID | none |
| Sequence length | 3433 |
| Download predictions | smoothed scores raw scores |