Download PostScript file
>A8DG50_LOOPS
1-122, 132-146, 161-173, 185-258, 287-315, 383-436, 445-456, 462-534, 539-624, 645-688, 757-767, 777-785, 858-870, 946-961, 970-1024, 1045-1056, 1078-1176, 1188-1245, 1267-1327, 1348-1363, 1368-1395, 1420-1430, 1440-1532, 1542-1554, 1567-1583, 1595-1605, 1613-1628, 1687-1699, 1709-1719, 1776-1785, 1796-1804, 1869-1879, 1884-1891, 1903-1911, 1924-1939, 1965-1977, 1997-2080, 2097-2167, 2174-2182, 2188-2224, 2239-2248, 2253-2270, 2285-2334, 2349-2416, 2421-2444, 2454-2476, 2507-2529, 2548-2589, 2602-2619, 2630-2656, 2680-2711, 2725-2735, 2763-2812, 2820-2832, 2865-2901, 2911-2919, 2953-2989, 3004-3011
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YPWPLYGNEG CGWAGWLLSP RGSRPSWGPT DPRRRSRNLG KVidtltcgf aDLMGYIPLV GAPLGGaara lahgvrvled GVNYATGNLP GCSfsiflla llscLTVPAS AYQVRNSSGL YHVTNDCPNS SIVYEAPDAI LHTPGCVPCV REGNTSRCWV AMTPTVATKD GKLPTTQLrr hidllvgsat lcsalyvgdl cgsvflVGQL FTFSPKHHWT TQDCNCSIYP GHITGhrmaw dmmmnwspta alvmaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfas vdAQTYVTGG SAGRAALGFT TFLSPGPKQN IQLVNTNGSW HINSTALNCN ESLDTGwlag lfyyNRFNSS GCRNRLascr lLTDFDQGWG PISHANGSGP DQRPYCWHYP PKPCGIVSAK TVCGPVYCFT PSPVAVGTTD KSGVPTYNWG ANETdvfvLN STRPPQGSWF GCTWMNSTGF TKVCGAPPCA IGGTGNNTLH CPTDCFRKHP ETTYSRCGSG PWLTPRCLVH YPYRLWHYPC TINYtifkvr myvggvehrl eaacNWTRGE PCGLEDRDRT ELSPLLLSTT QWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvtlnaASLA GTHGPVPflv ffcfawYLKG RWVPGavyal ygmwplllll lalpqrayal dtevaascgg vvlvglvalt lspyykryis wclwwlqyfl trveaqlHVW VPPLNVRGGR davillmcva hpilvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltGTYIY NHLTPLRDWA HnglqdlavA VEPVVFSPME TKLITWGADT AACGDIINGL PVSARRGQEI LLGPADGVVS KGWRllapit ayaqqtrgll gciiTSLTGR DKNQVEgevq ivstaaqtfl atcingvCWT VYHGAGTRTI ASPKGPVIQM YTNVDKDLVG WPAPQGSRSL TPCTCGSSDL YLVTRHADVI PVRRRGDSRG SLLSPRPISY LKGSSGGPLL CPAGHAvgif raavctrGVA KAVDFIPVES LETTMRSPVF TDNSSPPAVP QSFQVTHLHA PTGSGKSTKV PAAYAaqgyk vlvlnpsvaa tlgfgaYMSK AHGIDPNIRT GVRTITTGSP ITYSTYGKFL ADGGCSGGAY DIIICDECHS TDATSILgig tvldqaetag arlvvlaTAT PPGSVTVPHP NIEevalSTT GEIPFYGKAI PLEVIKGGRH LIFCHskrkc delaaklaal ginavayyrG LDVSVIPTSG dvvvvatdaL MTGFTGDFDS VIDCNTCVTQ TVDFSLDPTF TIETTTLPQD AVSRTQRRGR TGRGKPGIYR FVAPGERPSG MFDSSVLCEC YDAGCAWYEL TPaettvrlr aYMNTPGLPV CQDHlefweg vftgltHIDA HFLSQTKQSG ESLpylvayq atvcARAQAP PPSWDqmwkc lvRLKPTLHG PTPLLYRLga vqnevtlthp itkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvILSG KPAIIPDREv lyrefdemEE CSQHLPYIEq gmmlaeqfkq kalgllqtas rqaeviapav qtnwqkleaf wakhmwnfis giqylAGLST LPGNPaiasl maftaAVTSP LTTSqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkiMS GEVPSTEDLv nllPAILSPG Alvvgvvcaa ilRRHVGPGE Gavqwmnrli afaSRGNHVS PTHYVPESDa aarvtailss ltvtqllrrl hqwiSSECTT PCSGSWLrdi wdwicevlsd fktwlkAKLV PQLPGIPFVS CQRGYRGIWR GDGIMHTRCH CGAEISGHVR NGTMRIVGPR TCRNMWSGTF PINAYTTGPC TPLPAPNYKF alwrvsaeey veirqvGDFH YVTGMTTDNL KCPCQVPSPE FFTELDGVRL HRYAPPCKPL LREEVSFRVG LHEYPVGSQL PCEPEPDvav ltsMLTDPSH ITaeaagRRL ARGSPPSEAS SSASQLSAPS LKATCSANHD SPDAeliean llwwqemgGN ITRVESENkv viLDSFEPLV AKEDEREISV paeilrksrr faqaLPIWAR PDYNPPLIEA WKQPDYEPPV VHGCPLPPPQ SPPVPPPRKK RTVVltestl stalaelaTK SFGSSSTSGI TGDNTTTSSE PAPSGCPPDS DAESYSSMPP LEGEPGDPDL SDGSWSTVSG EAGTEDvvcc SMSYSWTGAL ITPCAAEEQK LPINalsnsl lrhHNLVYST TSRSACQRQK KVTFDRlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK FGYGAKDVRc harkavnhin svwkdllEDS VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRVc ekmalydvvt kLPLAVMGSS YGFQYSPGQr veflvqawkS KKTPMGFSYD TRCFDSTVTE SDIRTEeaiy qccdldpqar vaikslterL YVGGPLTNSR GENCGYRRCR ASGVLTTSCG Ntltcyikar aacrAAGLQD CTMLVcgddl vvicesagvq edaaslraft eaMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDGAGKR VYYLTRDPTT PLaraawetA RHTPVNSWLG NIimfaptlw armilmthff svliardqle qaldCEIYGA CYSIEPLDLP PIIQRLHGLS AFSLHSYSPG Einrvaaclr KLGVPPLRAw rhrarnvrar llsrggraai cgkylfnwav rtKLKLTPIA AAGQLDLSGW FTAGYSGGDI YHSVSHARPr wfwfclllla agvGIYLLPN R
>A8DG50_HOTLOOPS
1-77, 103-120, 245-256, 593-603, 1087-1097, 1135-1155, 1270-1282, 1349-1359, 1471-1509, 1686-1696, 2000-2010, 2033-2043, 2154-2163, 2256-2276, 2347-2375, 2459-2469, 2507-2521, 2566-2585, 2633-2644, 2678-2697, 2820-2831, 2914-2923, 2930-2939
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAqpg ypwplygneg cgwagwllsp rgSRPSWGPT DPRRRSRNLG kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnssgl yhvtndcpns sivyeapdai lhtpgcvpcv regntsrcwv amtpTVATKD GKLPTTqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfspkhhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvmaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfas vdaqtyvtgg sagraalgft tflspgpkqn iqlvntngsw hinstalncn esldtgwlag lfyynrfnss gcrnrlascr lltdfdqgwg pishangsgp dqrpycwhyp pkpcgivsak tvcgpvycft pspvavgttd ksgvptynwg anetdvfvln strppqgswf gctwmnstgf tkvcgappca iggtgnntlh cptdcfrkhp etTYSRCGSG PWLtprclvh ypyrlwhypc tinytifkvr myvggvehrl eaacnwtrge pcgledrdrt elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvtlnaasla gthgpvpflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglvalt lspyykryis wclwwlqyfl trveaqlhvw vpplnvrggr davillmcva hpilvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyiy nhltplrdwa hnglqdlava vepvvfspme tklitwgadt aacgdiingl pvsarrgqei llgpadgvvs kgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstaaqtfl atcingvcwt vyhgagTRTI ASPKGPViqm ytnvdkdlvg wpapqgsrsl tpctcgssdl ylvtRHADVI PVRRRGDSRG SLLSPrpisy lkgssggpll cpaghavgif raavctrgva kavdfipves lettmrspvf tdnssppavp qsfqvthlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsK AHGIDPNIRT GVrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatAT PPGSVTVPHp nieevalstt geipfygkai plevikggrh lifchskrkc delaaklaal ginavayyrg ldvsviptsg dvvvvatdal mtgftgdfds vidcntcvtq tvdfsldptf TIETTTLPQD AVSRTQRRGR TGRGKPGIYR FVAPGERPSg mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg eslpylvayq atvcaraqap ppswdqmwkc lvrlkptlhg ptpllyrlga vqnevtlthp itkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrVILSG KPAIIPdrev lyrefdemee csqhlpyieq gmmlaeqfkq kalgllqtas rqaeviapav qtnwqkleaf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwissectt pcsgswlrdi wdwicevlsd fktwlkaklV PQLPGIPFVS cqrgyrgiwr gdgimhtrch cgAEISGHVR NGTmrivgpr tcrnmwsgtf pinayttgpc tplpapnykf alwrvsaeey veirqvgdfh yvtgmttdnl kcpcqvpspe ffteldgvrl hryappckpl lreevsfrvg lheYPVGSQL PCEpepdvav ltsmltdpsh itaeaagrrl argsppseas ssasqlsaps lkatcsanhd spdaeliean llwwqemggn itrvesenkv vildsFEPLV AKEDEREISV PAEILRksrr faqalpiwar pdynppliea wkqpdyeppv vhgcplpppq sppvppprkk rtvvltestl stalaeLATK SFGSSSTSGI TGDNTTTSSE PAPSGcppds daesyssmpp legepgdpdl sdgswstvsg eagtedvvcc smsyswtgal itpcaaeeqk lpinalsnsl lrhhnlvyST TSRSACQRQk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK Fgygakdvrc harkavnhin svwkdlleds vtpidttima knevfCVQPE KGGRKPARLI VFPDLgvrvc ekmalydvvt klplavmgss ygfqyspgqr veflvqawks kkTPMGFSYD TRCFdstvte sdirteeaiy qccdldpqar vaiksltERL YVGGPLTNSR GENCGYRrcr asgvlttscg ntltcyikar aacraaglqd ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraawetA RHTPVNSWLG Niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgVPPLRAW RHRarnvraR LLSRGGRAAi cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsharpr wfwfclllla agvgiyllpn r
>A8DG50_REM465
1-17, 47-74, 103-113, 1231-1239, 2187-2217, 2320-2334, 2351-2401
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PEGRtwaqpg ypwplygneg cgwagwllsp rgSRPSWGPT DPRrrsrnlg kvidtltcgf adlmgyiplv gaplggaara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnssgl yhvtndcpns sivyeapdai lhtpgcvpcv regntsrcwv amtptvatkd gklpttqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftfspkhhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvmaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfas vdaqtyvtgg sagraalgft tflspgpkqn iqlvntngsw hinstalncn esldtgwlag lfyynrfnss gcrnrlascr lltdfdqgwg pishangsgp dqrpycwhyp pkpcgivsak tvcgpvycft pspvavgttd ksgvptynwg anetdvfvln strppqgswf gctwmnstgf tkvcgappca iggtgnntlh cptdcfrkhp ettysrcgsg pwltprclvh ypyrlwhypc tinytifkvr myvggvehrl eaacnwtrge pcgledrdrt elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgssia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvtlnaasla gthgpvpflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg vvlvglvalt lspyykryis wclwwlqyfl trveaqlhvw vpplnvrggr davillmcva hpilvfditk lllavfgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyiy nhltplrdwa hnglqdlava vepvvfspme tklitwgadt aacgdiingl pvsarrgqei llgpadgvvs kgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstaaqtfl atcingvcwt vyhgagtrti aspkgpviqm ytnvdkdlvg wpapqgsrsl tpctcgssdl ylvtrhadvi pvrrrgdsrg sllsprpisy lkgssggpll cpaghavgif raavctrgva kavdfipves lettmrspvf tdnssppavp qsfqvthlha PTGSGKSTKv paayaaqgyk vlvlnpsvaa tlgfgaymsk ahgidpnirt gvrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatat ppgsvtvphp nieevalstt geipfygkai plevikggrh lifchskrkc delaaklaal ginavayyrg ldvsviptsg dvvvvatdal mtgftgdfds vidcntcvtq tvdfsldptf tietttlpqd avsrtqrrgr tgrgkpgiyr fvapgerpsg mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg eslpylvayq atvcaraqap ppswdqmwkc lvrlkptlhg ptpllyrlga vqnevtlthp itkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvilsg kpaiipdrev lyrefdemee csqhlpyieq gmmlaeqfkq kalgllqtas rqaeviapav qtnwqkleaf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaaig svglgkvlvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwissectt pcsgswlrdi wdwicevlsd fktwlkaklv pqlpgipfvs cqrgyrgiwr gdgimhtrch cgaeisghvr ngtmrivgpr tcrnmwsgtf pinayttgpc tplpapnykf alwrvsaeey veirqvgdfh yvtgmttdnl kcpcqvpspe ffteldgvrl hryappckpl lreevsfrvg lheypvgsql pcepepdvav ltsmltdpsh itaeaaGRRL ARGSPPSEAS SSASQLSAPS LKATCSAnhd spdaeliean llwwqemggn itrvesenkv vildsfeplv akedereisv paeilrksrr faqalpiwar pdynppliea wkqpdyeppv vhgcplpppQ SPPVPPPRKK RTVVltestl stalaelatk SFGSSSTSGI TGDNTTTSSE PAPSGCPPDS DAESYSSMPP LEGEPGDPDL Sdgswstvsg eagtedvvcc smsyswtgal itpcaaeeqk lpinalsnsl lrhhnlvyst tsrsacqrqk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveeacs ltpphsaksk fgygakdvrc harkavnhin svwkdlleds vtpidttima knevfcvqpe kggrkparli vfpdlgvrvc ekmalydvvt klplavmgss ygfqyspgqr veflvqawks kktpmgfsyd trcfdstvte sdirteeaiy qccdldpqar vaikslterl yvggpltnsr gencgyrrcr asgvlttscg ntltcyikar aacraaglqd ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraaweta rhtpvnswlg niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgvpplraw rhrarnvrar llsrggraai cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsharpr wfwfclllla agvgiyllpn r
| JOB-ID | A8DG50_122703Ziudln8AAQEAAHG6qYMAAABX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | A8DG50 |
| Description | tr|A8DG50|A8DG50_9HEPC Genome polyprotein OS=hepatitis C virus genotype 1a OX=2847144 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 3011 |
| Download predictions | smoothed scores raw scores |