Download PostScript file
>B3TKQ3_LOOPS
1-122, 132-145, 160-173, 185-258, 288-315, 381-392, 398-409, 419-434, 441-624, 645-688, 778-785, 859-870, 944-962, 984-1020, 1045-1056, 1078-1101, 1107-1176, 1188-1245, 1257-1327, 1348-1363, 1368-1396, 1420-1430, 1440-1532, 1542-1554, 1567-1584, 1595-1605, 1613-1626, 1687-1699, 1709-1719, 1776-1785, 1796-1804, 1869-1879, 1884-1891, 1903-1911, 1924-1939, 1965-1977, 1998-2079, 2097-2167, 2190-2224, 2238-2247, 2252-2270, 2282-2334, 2349-2415, 2422-2444, 2454-2476, 2507-2529, 2548-2588, 2601-2619, 2630-2656, 2680-2711, 2726-2735, 2763-2812, 2820-2832, 2865-2901, 2911-2919, 2953-2988, 3004-3011
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAQPG YAWPLYGNEG CGWAGWLLSP RGSRPSWGPT DPRRRSRNLG KVidtltcgf aDLMGYIPLV GAPLGgvara lahgvrvleD GVNYATGNLP GCSfsiflla llscLTVPAS AYQVRNSTGL YHVTNDCPNS SIVFETADTI LHTPGCVPCV RKGNTSRCWV AVTPTVATRD GKLPTTQLrr hidllvgsat lcsalyvgdl cgsvflvGQL FTLSPRHHWT TQDCNCSIYP GHITGhrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfag VDAETHVTGG SVaraasGFA GFFARGSKQn vqlintngSW HINSTALNCN DSLEtgwlag LFYHNNFNSS GCSERLASCR PLTDYSQGWG PISYANGSGP DQRPYCWHYP PRPCGIVPAK SVCGPVYCFT PSPVVVGTTD KSGAPTYNWG ENDTDVFVLN NTRPPLGNWF GCTWMNATGF TKVCGAPPCV IGGVGNNTLR CPTDCFRKHP EATYSRCGSG PWITPRCMVH YPYRLWHYPC TINYtifkvr myvggvehrl evacNWTRGE RCDLEDRDRS ELSPLLLSTT QWQVLPCSFT TLPALSTGli hlhqnivdvq ylygvgsaia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthgfvsflv ffcfawyLKG RWVPGavyal ygmwplllll lalpqrayal dtevaascgg avlvglmalt lspyyklyis wclwwlqyfl traeallhVW VPPLNVRGGR davillmcvv hptlvfditk lllavlgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaLTGTYVY DHLTPLRDWA HNglrdlava vepvvfsrme tklITWGADT AACGDIINGL PVSARRGREI LLGPADGMVS rgwrllapit ayaqqtrgll gciiTSLTGR DKNQVEgevq ivstatqtfl atcingvCWT VYHGAGTRTI ASPKGPVIQM YtnvdkDLVG WAAPQGSRSL TPCTCGSSDL YLVTRHADVI PVRRRGDSRG SLLSPRPISY LKGSSGGPLL CPAGHAvgif raavctrGVA KAVDFIPVEN LETTMRSPVF TDNSSPPAVP QSFQVAHLHA PTGSGKSTKV PAAYAaqgyk vlvlnpSVAA TLGFGAYMSK AHGVDPNIRT GVRTITTGSP ITYSTYGKFL ADGGCSGGAY DIIICDECHS TDATSILgig tvldqaetag arlvvlaTAT PPGSVTVPHP NIEevalSTT GEIPFYGKAI PLEAIKGGRH LIFCHSkkkc delaaklval ginavayyrG LDVSVIPTSG dvvvvatdaL MTGFTGDFDS VIDCNTCVTQ TVDFSLDPTF TIETTTLPQD AVSRTQRRGR TGRGRPGIYR FVTPGERPSG MFDSSVLCEC YDAGCAWYEL TPaettvrlr aYMNTPGLPV CQDHlefweg vftgltHIDA HFLSQTKQSG ENLPylvayq atvcARAQAP PPSWDqmwkc liRLKPTLHG PTPLLYrlga vqneitlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvVLSG KPAIIPDREv lyrefdemEE CSQHLPYIEq gmmlaeqfkq kalgllqtas rqaevvapvv qtnwqklevf wakhmwnfis giqylAGLST LPGNPaiasl maftaAVTSP LTTSqtllfn ilggwvaaql aapgaatafv gaglagaavg gvglgkilvd ilagygagva galvafkiMS GEVPSTEDLv nllPAILSPG Alvvgvvcaa ilRRHVGPGE Gavqwmnrli afaSRGNHVS PTHYVPESDa aarvtailss ltvtqllrrl hqwiSSECTT PCSGSWLrdi wdwicevlsd fktwlkaKLM PQLPGIPFVS CQRGYRGVWR GDGIMHTRCH CGAEITGHVK NGTMRIVGPR TCRNMWSGTF PINAYTTGPC TPLPAPNYTf alwrvsaeey veirqvGDFH YVTGMTTDNL RCPCQVPSPE FFTELDGVRL HRFAPPCKPL LREEVSFRVG LNEYPVGSQL PCEPEPDvav ltsmltdpsh itaeaakrrL ARGSPPSMAS SSASQLSAPS LKATCTANHD SPDAeliean llwrqemGGN ITRVESEnkv vILDSFDPLV AEEDEREISV paeilrksrr fTQALPVWAR PDYNPPLIET WKKPDYEPPV VHGCALPPPQ SPPVPPPRKK RTVVltestl stalaelaTK SFGSSSTSGI TGDNTTTSSE PASSGRPPDS DAESCSSMPP LEGEPGDPDL SDGSWSTVSS GADTEdvvcc sMSYTWTGAL VTPCAAEEQK LPINalsnsl lrhHNLVYST TSRSACQRQK KVTFDRlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK FGYGAKDVRc harkavahin svwkdllEDS VTPIDTTIMA KNEVFCVQPE KGGRKPARLI VFPDLGVRvc ekmalydvvs KLPLAVMGSS YGFQYSPGQr veflvqawkS KRTPMGFSYD TRCFDSTVTE SDIRTEeaiy qccdldpqar vaikslterL YVGGPLTNSR GENCGYRRCR ASGVLTTSCG Ntltcyikaq aacraAGLQN CTMLVcgddl vvicesagvq edaaslraft eaMTRYSAPP GDPPQPEYDL ELITSCSSNV SVAHDGAGKR VYYLTRDPTT PLaraawetA RHTPINSWLG NIimfaptlw armilmthff svliardqle qaldCEIYGA CYSIEPLDLP PIIQRLHGLS AFSLHSYSPG Einrvaaclr KLGVPPLRAw rhrarsvrak llsrggraai cgkylfnwav rtKLKLTPIA AAGQLDLSGW FTAGYSGGDI YHSVSRARpr wfwfclllla agvGIYLLPN R
>B3TKQ3_HOTLOOPS
1-77, 103-120, 243-257, 592-604, 643-657, 1087-1097, 1134-1155, 1270-1282, 1349-1359, 1471-1510, 1686-1696, 2001-2010, 2034-2044, 2241-2250, 2256-2294, 2317-2328, 2347-2379, 2459-2469, 2507-2522, 2566-2583, 2633-2644, 2678-2697, 2821-2831, 2914-2923, 2930-2939, 3003-3011
MSTNPKPQRK TKRNTNRRPQ DVKFPGGGQI VGGVYLLPRR GPRLGVRATR KTSERSQPRG RRQPIPKARR PEGRTWAqpg yawplygneg cgwagwllsp rgSRPSWGPT DPRRRSRNLG kvidtltcgf adlmgyiplv gaplggvara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivfetadti lhtpgcvpcv rkgntsrcwv avTPTVATRD GKLPTTQlrr hidllvgsat lcsalyvgdl cgsvflvgql ftlsprhhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfag vdaethvtgg svaraasgfa gffargskqn vqlintngsw hinstalncn dsletgwlag lfyhnnfnss gcserlascr pltdysqgwg pisyangsgp dqrpycwhyp prpcgivpak svcgpvycft pspvvvgttd ksgaptynwg endtdvfvln ntrpplgnwf gctwmnatgf tkvcgappcv iggvgnntlr cptdcfrkhp eATYSRCGSG PWITprcmvh ypyrlwhypc tinytifkvr myvggvehrl evACNWTRGE RCDLEDRdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgsaia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthgfvsflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg avlvglmalt lspyyklyis wclwwlqyfl traeallhvw vpplnvrggr davillmcvv hptlvfditk lllavlgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyvy dhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgrei llgpadgmvs rgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstatqtfl atcingvcwt vyhgagTRTI ASPKGPViqm ytnvdkdlvg waapqgsrsl tpctcgssdl ylvTRHADVI PVRRRGDSRG SLLSPrpisy lkgssggpll cpaghavgif raavctrgva kavdfipven lettmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsK AHGVDPNIRT GVrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatAT PPGSVTVPHp nieevalstt geipfygkai pleaikggrh lifchskkkc delaaklval ginavayyrg ldvsviptsg dvvvvatdal mtgftgdfds vidcntcvtq tvdfsldptf TIETTTLPQD AVSRTQRRGR TGRGRPGIYR FVTPGERPSG mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg enlpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqneitlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrVVLSG KPAIIPdrev lyrefdemee csqhlpyieq gmmlaeqfkq kalgllqtas rqaevvapvv qtnwqklevf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaavg gvglgkilvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwissectt pcsgswlrdi wdwicevlsd fktwlkaklm PQLPGIPFVS cqrgyrgvwr gdgimhtrch cgaEITGHVK NGTMrivgpr tcrnmwsgtf pinayttgpc tplpapnytf alwrvsaeey veirqvgdfh yvtgmttdnl rcpcqvpspe ffteldgvrl hrfappckpl lreevsfrvg lneypvgsql pcepepdvav ltsmltdpsh itaeaakrrl argsppsmas ssasqlsaps lkatctanhd spdaeliean llwrqemggn ITRVESENKV vildsFDPLV AEEDEREISV PAEILRKSRR FTQALPVWAR PDYNppliet wkkpdyeppv vhgcalPPPQ SPPVPPPRkk rtvvltestl stalaeLATK SFGSSSTSGI TGDNTTTSSE PASSGRPPDs daescssmpp legepgdpdl sdgswstvss gadtedvvcc smsytwtgal vtpcaaeeqk lpinalsnsl lrhhnlvyST TSRSACQRQk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveEACS LTPPHSAKSK FGygakdvrc harkavahin svwkdlleds vtpidttima knevfCVQPE KGGRKPARLI VFPdlgvrvc ekmalydvvs klplavmgss ygfqyspgqr veflvqawks krTPMGFSYD TRCFdstvte sdirteeaiy qccdldpqar vaiksltERL YVGGPLTNSR GENCGYRrcr asgvlttscg ntltcyikaq aacraaglqn ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraaweta RHTPINSWLG Niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgVPPLRAW RHRarsvraK LLSRGGRAAi cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsrarpr wfwfclllla agVGIYLLPN R
>B3TKQ3_REM465
1-17, 47-74, 103-113, 2187-2214, 2321-2334, 2351-2413
MSTNPKPQRK TKRNTNRrpq dvkfpgggqi vggvyllprr gprlgvRATR KTSERSQPRG RRQPIPKARR PEGRtwaqpg yawplygneg cgwagwllsp rgSRPSWGPT DPRrrsrnlg kvidtltcgf adlmgyiplv gaplggvara lahgvrvled gvnyatgnlp gcsfsiflla llscltvpas ayqvrnstgl yhvtndcpns sivfetadti lhtpgcvpcv rkgntsrcwv avtptvatrd gklpttqlrr hidllvgsat lcsalyvgdl cgsvflvgql ftlsprhhwt tqdcncsiyp ghitghrmaw dmmmnwspta alvvaqllri pqaildmiag ahwgvlagia yfsmvgnwak vlvvlllfag vdaethvtgg svaraasgfa gffargskqn vqlintngsw hinstalncn dsletgwlag lfyhnnfnss gcserlascr pltdysqgwg pisyangsgp dqrpycwhyp prpcgivpak svcgpvycft pspvvvgttd ksgaptynwg endtdvfvln ntrpplgnwf gctwmnatgf tkvcgappcv iggvgnntlr cptdcfrkhp eatysrcgsg pwitprcmvh ypyrlwhypc tinytifkvr myvggvehrl evacnwtrge rcdledrdrs elsplllstt qwqvlpcsft tlpalstgli hlhqnivdvq ylygvgsaia swaikweyvv llfllladar vcsclwmmll isqaeaalen lvilnaasla gthgfvsflv ffcfawylkg rwvpgavyal ygmwplllll lalpqrayal dtevaascgg avlvglmalt lspyyklyis wclwwlqyfl traeallhvw vpplnvrggr davillmcvv hptlvfditk lllavlgplw ilqasllkvp yfvrvqgllr icalarkmag ghyvqmaiik lgaltgtyvy dhltplrdwa hnglrdlava vepvvfsrme tklitwgadt aacgdiingl pvsarrgrei llgpadgmvs rgwrllapit ayaqqtrgll gciitsltgr dknqvegevq ivstatqtfl atcingvcwt vyhgagtrti aspkgpviqm ytnvdkdlvg waapqgsrsl tpctcgssdl ylvtrhadvi pvrrrgdsrg sllsprpisy lkgssggpll cpaghavgif raavctrgva kavdfipven lettmrspvf tdnssppavp qsfqvahlha ptgsgkstkv paayaaqgyk vlvlnpsvaa tlgfgaymsk ahgvdpnirt gvrtittgsp itystygkfl adggcsggay diiicdechs tdatsilgig tvldqaetag arlvvlatat ppgsvtvphp nieevalstt geipfygkai pleaikggrh lifchskkkc delaaklval ginavayyrg ldvsviptsg dvvvvatdal mtgftgdfds vidcntcvtq tvdfsldptf tietttlpqd avsrtqrrgr tgrgrpgiyr fvtpgerpsg mfdssvlcec ydagcawyel tpaettvrlr aymntpglpv cqdhlefweg vftglthida hflsqtkqsg enlpylvayq atvcaraqap ppswdqmwkc lirlkptlhg ptpllyrlga vqneitlthp vtkyimtcms adlevvtstw vlvggvlaal aayclstgcv vivgrvvlsg kpaiipdrev lyrefdemee csqhlpyieq gmmlaeqfkq kalgllqtas rqaevvapvv qtnwqklevf wakhmwnfis giqylaglst lpgnpaiasl maftaavtsp lttsqtllfn ilggwvaaql aapgaatafv gaglagaavg gvglgkilvd ilagygagva galvafkims gevpstedlv nllpailspg alvvgvvcaa ilrrhvgpge gavqwmnrli afasrgnhvs pthyvpesda aarvtailss ltvtqllrrl hqwissectt pcsgswlrdi wdwicevlsd fktwlkaklm pqlpgipfvs cqrgyrgvwr gdgimhtrch cgaeitghvk ngtmrivgpr tcrnmwsgtf pinayttgpc tplpapnytf alwrvsaeey veirqvgdfh yvtgmttdnl rcpcqvpspe ffteldgvrl hrfappckpl lreevsfrvg lneypvgsql pcepepdvav ltsmltdpsh itaeaaKRRL ARGSPPSMAS SSASQLSAPS LKATctanhd spdaeliean llwrqemggn itrvesenkv vildsfdplv aeedereisv paeilrksrr ftqalpvwar pdynppliet wkkpdyeppv vhgcalpppq SPPVPPPRKK RTVVltestl stalaelatk SFGSSSTSGI TGDNTTTSSE PASSGRPPDS DAESCSSMPP LEGEPGDPDL SDGSWSTVSS GADtedvvcc smsytwtgal vtpcaaeeqk lpinalsnsl lrhhnlvyst tsrsacqrqk kvtfdrlqvl dshyqdvlke vkaaaskvka nllsveeacs ltpphsaksk fgygakdvrc harkavahin svwkdlleds vtpidttima knevfcvqpe kggrkparli vfpdlgvrvc ekmalydvvs klplavmgss ygfqyspgqr veflvqawks krtpmgfsyd trcfdstvte sdirteeaiy qccdldpqar vaikslterl yvggpltnsr gencgyrrcr asgvlttscg ntltcyikaq aacraaglqn ctmlvcgddl vvicesagvq edaaslraft eamtrysapp gdppqpeydl elitscssnv svahdgagkr vyyltrdptt plaraaweta rhtpinswlg niimfaptlw armilmthff svliardqle qaldceiyga cysiepldlp piiqrlhgls afslhsyspg einrvaaclr klgvpplraw rhrarsvrak llsrggraai cgkylfnwav rtklkltpia aagqldlsgw ftagysggdi yhsvsrarpr wfwfclllla agvgiyllpn r
| JOB-ID | B3TKQ3_192528Ziv-qH8AAQEAAHG535gAAAAR |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | B3TKQ3 |
| Description | tr|B3TKQ3|B3TKQ3_9HEPC Genome polyprotein OS=hepatitis C virus genotype 1a OX=2847144 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3011 |
| Download predictions | smoothed scores raw scores |