Download PostScript file
>B8YB53_LOOPS
1-16, 26-76, 100-108, 142-177, 184-235, 250-259, 276-296, 304-340, 346-357, 366-388, 400-428, 446-468, 486-496, 529-587, 593-609, 643-657, 679-693, 714-723, 730-737, 750-805, 849-868
MSEKNIKGIK FGILSPdeir kmsvtAIITP DVYDEDGTPI EGSVMDPRLG VIEPGQKCPT CGNTLGNCPG HFGHIElvrp vihvgfvkhv yeflkatcrR CGRVKISEde iekysriyna ikkrwpsaar rlteyvkkta mKAQVCPHCG EKQFKIKLEK PYNFYEERKE GVAKLTPsdi rerLEKVPES DVEILGYDPT TSRPEWMILT VLPVPPITIR PSIMIESGIR AEDDLthklv divrinerlK ESIDAGAPQl iiedlwdllq yhvatYFDNE IPGLPPSKHR SGRPLRtlaq rlkGKEGRFR GNLSGKRVDF SSRTVISPDP NISIDEVGVP eiiarTLTVP ERITPWNiek lrqfvINGPD KWPGANYVIR PDGRRIDLry vkdrkelasT LAPGYVVERH LTDGDVVLFN RQPSLHRIsm mahrvrvlkg ltfrlNLLVC PPYNADFDGD EMNLHVPQse eaiaeakeim lvhknIITPR YGGPIIgaaq dyisgayllt vkttlltkee aqqilgvaDV KIDLGEPAIL APREYYTGKQ VVSAFLPKDF NFHGQANVSS GPRLCKNEDC PHDSYVVikn giLLEGVFDK KAIGNQQPEs ilhwlikeys deygkwlmdn lfrvfirfve lqGFTMRLED VSLGDDVkke iyneidrakv evdnliqkYK NGELEPIPGR TLEeslenyi ldtldklrst agdIASKYLD PFNfayvmaR TGARGSVlni tqmaamlgqQ SVRGERIKRG YMTRTLPHFK PYDISPEARG FIYSSFRTGL KPTELFFHAA GGREGlvdta vrtsqsgymq rrlinalsdl raeydgtvrs lygeviqvAY GDDGVFPMYS AHGKTVDVnr ifervvgwkt
>B8YB53_HOTLOOPS
1-18, 29-39, 97-114, 119-127, 140-158, 168-207, 227-236, 281-295, 301-340, 347-357, 365-386, 398-413, 646-656, 663-673, 678-691, 748-757, 763-777, 859-880
MSEKNIKGIK FGILSPDEir kmsvtaiiTP DVYDEDGTPi egsvmdprlg viepgqkcpt cgntlgncpg hfghielvrp vihvgfvkhv yeflkaTCRR CGRVKISEDE IEKYsriyNA IKKRWPSaar rlteyvkktA MKAQVCPHCG EKQFKIKLek pynfyeeRKE GVAKLTPSDI RERLEKVPES DVEILGYDPT TSRPEWMilt vlpvppitir psimieSGIR AEDDLThklv divrinerlk esidagapql iiedlwdllq yhvatyfdne IPGLPPSKHR SGRPLrtlaq RLKGKEGRFR GNLSGKRVDF SSRTVISPDP NISIDEVGVP eiiartLTVP ERITPWNiek lrqfVINGPD KWPGANYVIR PDGRRIdlry vkdrkelAST LAPGYVVERH LTDgdvvlfn rqpslhrism mahrvrvlkg ltfrlnllvc ppynadfdgd emnlhvpqse eaiaeakeim lvhkniitpr yggpiigaaq dyisgayllt vkttlltkee aqqilgvadv kidlgepail apreyytgkq vvsaflpkdf nfhgqanvss gprlcknedc phdsyvvikn gillegvfdk kaignqqpes ilhwlikeys deygkwlmdn lfrvfirfve lqgftMRLED VSLGDDvkke iyNEIDRAKV EVDnliqKYK NGELEPIPGR Tleeslenyi ldtldklrst agdiaskyld pfnfayvmar tgargsvlni tqmaamlGQQ SVRGERIkrg ymTRTLPHFK PYDISPEarg fiyssfrtgl kptelffhaa ggreglvdta vrtsqsgymq rrlinalsdl raeydgtvrs lygeviqvay gddgvfpmYS AHGKTVDVNR IFERVVGWKT
>B8YB53_REM465
none
mseknikgik fgilspdeir kmsvtaiitp dvydedgtpi egsvmdprlg viepgqkcpt cgntlgncpg hfghielvrp vihvgfvkhv yeflkatcrr cgrvkisede iekysriyna ikkrwpsaar rlteyvkkta mkaqvcphcg ekqfkiklek pynfyeerke gvakltpsdi rerlekvpes dveilgydpt tsrpewmilt vlpvppitir psimiesgir aeddlthklv divrinerlk esidagapql iiedlwdllq yhvatyfdne ipglppskhr sgrplrtlaq rlkgkegrfr gnlsgkrvdf ssrtvispdp nisidevgvp eiiartltvp eritpwniek lrqfvingpd kwpganyvir pdgrridlry vkdrkelast lapgyvverh ltdgdvvlfn rqpslhrism mahrvrvlkg ltfrlnllvc ppynadfdgd emnlhvpqse eaiaeakeim lvhkniitpr yggpiigaaq dyisgayllt vkttlltkee aqqilgvadv kidlgepail apreyytgkq vvsaflpkdf nfhgqanvss gprlcknedc phdsyvvikn gillegvfdk kaignqqpes ilhwlikeys deygkwlmdn lfrvfirfve lqgftmrled vslgddvkke iyneidrakv evdnliqkyk ngelepipgr tleeslenyi ldtldklrst agdiaskyld pfnfayvmar tgargsvlni tqmaamlgqq svrgerikrg ymtrtlphfk pydispearg fiyssfrtgl kptelffhaa ggreglvdta vrtsqsgymq rrlinalsdl raeydgtvrs lygeviqvay gddgvfpmys ahgktvdvnr ifervvgwkt
| JOB-ID | B8YB53_130515ZipVC38AAQEAAB1mKqsAAABP |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | B8YB53 |
| Description | sp|B8YB53|RPO1N_SACSH DNA-directed RNA polymerase subunit Rpo1N OS=Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12) OX=523848 GN=rpo1N PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 880 |
| Download predictions | smoothed scores raw scores |