>B8YB55_LOOPS
45-81, 91-131, 140-184, 191-222, 231-264, 296-307, 327-338, 400-412, 435-467, 545-556, 567-605, 614-667, 691-721, 730-738, 760-787, 793-844, 867-921, 935-949, 959-980, 1002-1031, 1048-1090, 1109-1128
mssnlsider wkvieayfks kglvrqhlds yndfvrnklq eiidEQGEIP TEIPGLKVRL GKIRIGKPRV RESDRGEREI Spmearlrnl TYAAPLWLTM IPVENNIEAE PEEVYIGDLP IMLKSAIDPI SqytldkliE IGEDPKDPGG YFIVNGSERV IVTQEDLAPN RVLVDTGKTG SNIThtakii SSTAGYRVPV TIERLKDGTF HVSFPAVPGK IPfvilmral GILTDRDIVY AVSLDPEIQN ELFPSLEQAS SIANvddald figsrvaigq krenriekaq qiidkYFLPH LGTSADDrrk kayylayais kvielyLGRR EPDDKDHYan krlrlagdlf aslfrvafka fvkdltyqle kskvrgrkla lkalvrpdiv terirhalaT GNWVGGRTGV SQlldrtnwl smlshlrrvi sslaRGQPNF EARDLHGTQW GRMCPFETPE GPNSGLVknl almaqiavgi nekivektly emgvvpveev irrvtegged qneylkwskv ilngrlvgyy rdgeelakki rerrRKGEIS DEVNVGhivt dfinevHVNC DSGRVRRPLI IVSNGNPLVT REDIEKLDSG SITFDdlvrq gkiEYLDAEE EENAYVALEP SDLTPEHTHL EIWSPAILGI TASIIPYPEH NQSPRNTyqs amakqalgly aanyqlrtdt RAHLLHYPQR PLVQTRALDI IGYTNRPAGN NailavisfT GYNMEDSIim nrssvergmy rstffrlysT EEVKYPGGQE DKIVMPEPGV RGYKGKEyyr llEDNGVVSP EVEVKGGDVL IGKVSPPRFL QEFKELSPEQ AKRDTSIVTR HGEMgivdlv litetaegnk lvkvrvRDLR IPSIGDKFAS RHGQKGVIGM LIPQVDMPYT VKGVVPDVIL NPHALPSRMT Lgqimegiag kyaaLSGNIV DATPFYKTPi eqlqneilKY GYLPDATEVT YDGRTGQKIK sriyfgvvyy qklhhmvadk iHARARGPVQ ILTRQPTEGR AREGGLRFGE Merdcligfg tamllkdRLL DNSDRTTIYV CDQCGYIGWY DKNKNKYVCP IHGDKSNLFP vtvsyafkll iqelmsmiIS PRLILEDRVG LSGGKGNE
>B8YB55_HOTLOOPS
1-10, 43-87, 162-198, 295-307, 369-389, 398-408, 505-535, 540-560, 569-607, 764-782, 823-844, 853-887, 969-979, 1004-1030, 1110-1128
MSSNLSIDER wkvieayfks kglvrqhlds yndfvrnklq eiIDEQGEIP TEIPGLKVRL GKIRIGKPRV RESDRGEREI SPMEARLrnl tyaaplwltm ipvennieae peevyigdlp imlksaidpi sqytldklie igedpkdpgg yfivngserv iVTQEDLAPN RVLVDTGKTG SNITHTAKII SSTAGYRVpv tierlkdgtf hvsfpavpgk ipfvilmral giltdrdivy avsldpeiqn elfpsleqas sianvddald figsrvaigq krenriekaq qiidKYFLPH LGTSADDrrk kayylayais kvielylgrr epddkdhyan krlrlagdlf aslfrvafka fvkdltyqLE KSKVRGRKLA LKALVRPDIv terirhaLAT GNWVGGRTgv sqlldrtnwl smlshlrrvi sslargqpnf eardlhgtqw grmcpfetpe gpnsglvknl almaqiavgi nekivektly emgvvpveev irrvTEGGED QNEYLKWSKV ILNGRLVGYY RDGEElakkI RERRRKGEIS DEVNVGHIVT dfinevhvNC DSGRVRRPLI IVSNGNPLVT REDIEKLDSG SITFDDLvrq gkieyldaee eenayvalep sdltpehthl eiwspailgi tasiipypeh nqsprntyqs amakqalgly aanyqlrtdt rahllhypqr plvqtraldi igytnrpagn nailavisft gynmedsiim nrssvergmy rstffrlyst eevKYPGGQE DKIVMPEPGV RGykgkeyyr lledngvvsp evevkggdvl igkvspprfl qeFKELSPEQ AKRDTSIVTR HGEMgivdlv liTETAEGNK LVKVRVRDLR IPSIGDKFAS RHGQKGVigm lipqvdmpyt vkgvvpdvil nphalpsrmt lgqimegiag kyaalsgniv datpfyktpi eqlqneilky gylpdateVT YDGRTGQKIk sriyfgvvyy qklhhmvadk ihaRARGPVQ ILTRQPTEGR AREGGLRFGE merdcligfg tamllkdrll dnsdrttiyv cdqcgyigwy dknknkyvcp ihgdksnlfp vtvsyafkll iqelmsmiiS PRLILEDRVG LSGGKGNE
>B8YB55_REM465
69-78, 826-834
mssnlsider wkvieayfks kglvrqhlds yndfvrnklq eiideqgeip teipglkvrl gkirigkpRV RESDRGERei spmearlrnl tyaaplwltm ipvennieae peevyigdlp imlksaidpi sqytldklie igedpkdpgg yfivngserv ivtqedlapn rvlvdtgktg snithtakii sstagyrvpv tierlkdgtf hvsfpavpgk ipfvilmral giltdrdivy avsldpeiqn elfpsleqas sianvddald figsrvaigq krenriekaq qiidkyflph lgtsaddrrk kayylayais kvielylgrr epddkdhyan krlrlagdlf aslfrvafka fvkdltyqle kskvrgrkla lkalvrpdiv terirhalat gnwvggrtgv sqlldrtnwl smlshlrrvi sslargqpnf eardlhgtqw grmcpfetpe gpnsglvknl almaqiavgi nekivektly emgvvpveev irrvtegged qneylkwskv ilngrlvgyy rdgeelakki rerrrkgeis devnvghivt dfinevhvnc dsgrvrrpli ivsngnplvt rediekldsg sitfddlvrq gkieyldaee eenayvalep sdltpehthl eiwspailgi tasiipypeh nqsprntyqs amakqalgly aanyqlrtdt rahllhypqr plvqtraldi igytnrpagn nailavisft gynmedsiim nrssvergmy rstffrlyst eevkypggqe dkivmpepgv rgykgkeyyr lledngvvsp evevkggdvl igkvspprfl qefkeLSPEQ AKRDtsivtr hgemgivdlv litetaegnk lvkvrvrdlr ipsigdkfas rhgqkgvigm lipqvdmpyt vkgvvpdvil nphalpsrmt lgqimegiag kyaalsgniv datpfyktpi eqlqneilky gylpdatevt ydgrtgqkik sriyfgvvyy qklhhmvadk iharargpvq iltrqptegr aregglrfge merdcligfg tamllkdrll dnsdrttiyv cdqcgyigwy dknknkyvcp ihgdksnlfp vtvsyafkll iqelmsmiis prliledrvg lsggkgne
JOB-ID | B8YB55_083804ZgZ97H8AAQEAAF8-sQ0AAABF |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | B8YB55 |
Description | sp|B8YB55|RPO2_SACSH DNA-directed RNA polymerase subunit Rpo2 OS=Saccharolobus shibatae (strain ATCC 51178 / DSM 5389 / JCM 8931 / NBRC 15437 / B12) OX=523848 GN=rpo2 PE=1 SV=2 |
Title/ID | none |
Sequence length | 1128 |
Download predictions | smoothed scores raw scores |