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>O92954_LOOPS
13-23, 36-54, 98-219, 230-255, 266-274, 282-293, 322-365, 385-402, 413-438, 446-455, 463-471, 493-589, 596-604, 614-675, 684-701
meavikviss acKTYCGKTS PSKkeigaml sllqkEGLLM SPSDLYSPGS WDPItaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfwLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV GTSCYHCGTA IGCNCATASA PPPPYVGSGL YPSLAGVGEQ QGQGGDTPRG AEQPRAEPGH AGLAPGPALt dwarireelA STGPPVVAMP VVIKTEGPAW TPLEPklitr ladtvRTKGL RSPItmaeve aLMSSPLLPH DVTnlmrvil gpapyalwmd awgvqlqtvi aAATRDPRHP ANGQGRGERT NLDRLKGLAD GMVGNPQGQA ALLRPgelva itasalqafr evarLAEPAG PWADITQGPS ESfvdfanrl ikAVEGSDLP PSARAPVIID CFRQKSQPdi qqlirAAPST LTTPGeiiky vlDRQKIAPL Tdqgiaaams saiqplvmav vnRERDGQTG SGGRARRLCY TCGSPGHYQA QCPKKRKSGN SRERCQLCDG MGHNAKQCRR RDSNQGQRPG RGLSSGPWPV SEQPAVSLAM TMEHKDRPLv rviltNTGSH PVKQrsvyit allDSGADIT IISEEDWPTD WPVVDTANPQ IHGIGGGIPM RKSRDMIELG VINRDGSLER PLLLFpavam vrgSILGRDC LQGLGLRLTN L
>O92954_HOTLOOPS
10-23, 97-150, 231-241, 246-257, 324-341, 414-423, 445-454, 495-505, 513-532, 539-570, 595-605, 641-653, 687-701
meavikvisS ACKTYCGKTS PSKkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfWLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV gtscyhcgta igcncatasa ppppyvgsgl ypslagvgeq qgqggdtprg aeqpraepgh aglapgpalt dwarireela STGPPVVAMP VviktEGPAW TPLEPKLitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaaTRDPRHP ANGQGRGERT Nldrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwaditqgps esfvdfanrl ikaVEGSDLP PSArapviid cfrqksqpdi qqliRAAPST LTTPgeiiky vldrqkiapl tdqgiaaams saiqplvmav vnreRDGQTG SGGRArrlcy tcGSPGHYQA QCPKKRKSGN SRercqlcDG MGHNAKQCRR RDSNQGQRPG RGLSSGPWPV seqpavslam tmehkdrplv rvilTNTGSH PVKQRsvyit alldsgadit iiseedwptd wpvvdtanpq IHGIGGGIPM RKSrdmielg vinrdgsler plllfpavam vrgsilGRDC LQGLGLRLTN L
>O92954_REM465
188-210, 495-503, 517-533, 544-568
meavikviss acktycgkts pskkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramvlgksge lktwglvlga lkaareeqvt seqakfwlgl gggrvsppgp eciekpater ridkgeevge ttvqrdakma peetatpktv gtscyhcgta igcncatasa ppppyvgsgl ypslagvGEQ QGQGGDTPRG AEQPRAEPGH aglapgpalt dwarireela stgppvvamp vviktegpaw tplepklitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaatrdprhp angqgrgert nldrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwaditqgps esfvdfanrl ikavegsdlp psarapviid cfrqksqpdi qqliraapst lttpgeiiky vldrqkiapl tdqgiaaams saiqplvmav vnreRDGQTG SGGrarrlcy tcgspgHYQA QCPKKRKSGN SRErcqlcdg mghNAKQCRR RDSNQGQRPG RGLSSGPWpv seqpavslam tmehkdrplv rviltntgsh pvkqrsvyit alldsgadit iiseedwptd wpvvdtanpq ihgigggipm rksrdmielg vinrdgsler plllfpavam vrgsilgrdc lqglglrltn l
| JOB-ID | O92954_021810ZixgYn8AAQEAAHG54g8AAAAV |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | O92954 |
| Description | sp|O92954|GAG_RSVSB Gag polyprotein OS=Rous sarcoma virus subgroup B (strain Schmidt-Ruppin) OX=269447 GN=gag PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 701 |
| Download predictions | smoothed scores raw scores |