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>P03306_LOOPS
24-52, 62-79, 88-100, 113-144, 155-192, 201-220, 232-269, 301-337, 354-380, 413-463, 472-547, 552-576, 605-623, 628-644, 649-685, 695-757, 766-775, 807-849, 856-871, 880-889, 906-921, 945-958, 977-987, 1058-1079, 1152-1171, 1197-1223, 1239-1260, 1267-1278, 1286-1349, 1359-1368, 1387-1399, 1414-1431, 1522-1635, 1644-1675, 1683-1695, 1705-1716, 1754-1773, 1779-1786, 1791-1800, 1809-1838, 1851-1869, 1880-1914, 1919-1929, 1950-1958, 1965-2003, 2026-2047, 2064-2111, 2124-2133, 2145-2163, 2185-2239, 2250-2266, 2292-2319
mnttncfial vylireiktl frsRTKGKME FTLHNGEKKT FYSRPNNHDN CWlntilqlf rYVDEPFFDW VYNSPENLTl daikqleNFT GLELHEGGPP alviwnikhl lqTGIGTASR PSEVCMVDGT DMCLADFHAG IFMKgqehav facvTSDGWY AIDDEDFYPW TPDPSDVLVF VPYDQEPLNG DWktqvqkkl KGAGQSSPAT GSQNQSGNTG siinnyymqq yQNSMSTQLG DNTISGGSNE GSTDTTSTHT TNTQNNDWFs klassaftgl fgalladkkt eettlledri LTTRNGHTTS TTQSSVGVTY GYSTEEDHVA GPNTSGLetr vvqaerffkk flfDWTTDKP FGYLTKLELP TDHHGVFGHL vdsyaymrng wdvevsavgn qfnggcllva mvPEWKAFDT REKYQLTLFP HQFISPRTNM TAHITVPYLG VNRYDQYKKH KPWtlvvmvl sPLTVSNTAA PQIKVYANIA PTYVHVAGEL PSKEGIFPVA CADGYGGLVT TDPKTADPVY GKVYNPPKTN YPGRFTNlld vAEACPTFLR FDDGKPYVVT RADDTRllak fdvslaakhm sntylsgiaq yytqYSGTIN LHFMFTGSTD SKArymvAYI PPGVETPPDT PEEAahciHA EWDTGLNSKF TFSIPYVSAA DYAYTASDTA ETTNVqgwvc vyqiTHGKAE NDTLLVSASA GKDFELRLPI DPRTQTTTTG ESADPVTTTV ENYGGDTQVQ RRHHTDVgfi mdrfvKINSL SPTHVidlmq thkhgivgal lraatyyfsd leivvrHDGN LTWVPNGAPE AALSNTSNPT AYNKAPFTRL ALPYTAPHRv latvyDGTNK YSASDSRSGD LgsiaarvaT QLPASFNYGa iqaqaihell vrmkrAELYC PRPLLAIKVT Sqdrykqkii apakqllnfd llklAGDVES NLGPFFFAdv rsnfsklvdt inqmqeDMST KHGPDFNrlv safeelatgv kairtgldea kpwyklikll srlscmaava arskdpvlva imladtglei ldstfvvKKS SDSLSSLFHV PAPAFSFGAp vllaglvkva ssffrstped leraekqlka rdindifail kngewlvkli lairdwikaw iaseekfvtm tDLVPGILEK QRDLNDPGKY Keakewldna rqaclksgnv hianlcKVVA PAPSKSRPEP VVVCLRGKSG QGKsflanvl aqaisthfTG RIDSVWYCPP DPDHFDGYNQ qtvvvmDDLG QNPDGKDFky faqmvSTTGF IPPMASLEDK GKPFNSKVII ATTNLYSGFT PRTMVCPDAL NRRFHFDIDV SAKDGYKINn kldiikalED THTNPVAMfq ydcallngma vemkrlQQDM FKPQPPLQNv yqlvqevier velHEKVSSH PIFKQISIPS Qksvlyflie kgqheaaief fegmvhdsvk eelrpliqqt sfvkrafkrl kenfeivalc ltllanivim iretrkrqkm vddavneyie rANITTDDKT LDEAEKNPLE TSGASTVGFR ERSLTGQKVR DDVSSEPAQP AEDQPQAEGP YSGPLERQKP LKVRAKLPQQ EGPYAGPMER QKPLKVKVKA PVVKEGPYEG PVKKPvalkv karNLIVTES GAPPTDLQKM VMGNTKPVEL NLDGKtvaic caTGVFGTAY LVPRHlfaek ydkiMLDGRA MTDSDYrvfe feikvkgqdm lsdaalivlh rgncvrditk hfrDTARMKK GTPVVGVVNN ADVgrlifSG EALTYKdivv CMDGDTMPGL faykaatrAG YCGGAVLAKD GADTFIVGTH SAGGNGVGyc scvsrsmlqk MKAHVDPEPH HEGLIVDTRd veervhvmrK TKLAPTVAYG VFNPEFGPAA LSNKDPRLNE GVVLddviFS KHKGDAKMTe edkalfrrca adyasrlhsV LGTANAPLsi yeaiKGVDGL DAMEPDTAPG LPWALQGKRR GALIDFENGT VGPeveaalk lmekreykfa cqtflKDEIR PMEKVRAGKT RIVDVLPveh ilytkmmigr fcaQMHSNNG PQIGSAVGCN PDVDWQRFGT HFAQYRNVWD VDYSAFDANH Csdamnimfe evfRTDFGFH PNAewilktl vnteHAYENK RITVEGGMPS GCSatsiint ilnniyvlya lrrhYEGVEL DTYTMISYGD DIVVASDYDL DFEALKPHFK SLGQTITPAD KSDKGFVLGq sitdvtflkR HFHMDYGTGF YKPVMAsktl eailsfarrg tiqeklisva gLAVHSGPDE YRRLFEPFQG LFEIPSYRSl ylrwvnavcg da
>P03306_HOTLOOPS
21-49, 203-218, 298-319, 325-335, 431-440, 558-569, 712-752, 1004-1012, 1155-1168, 1199-1209, 1313-1321, 1338-1347, 1415-1430, 1521-1583, 1599-1615, 1621-1638, 1644-1660, 1752-1771, 1855-1871, 1880-1889, 1919-1930, 2024-2047, 2221-2236, 2312-2321
mnttncfial vylireiktl FRSRTKGKME FTLHNGEKKT FYSRPNNHDn cwlntilqlf ryvdepffdw vynspenltl daikqlenft glelheggpp alviwnikhl lqtgigtasr psevcmvdgt dmcladfhag ifmkgqehav facvtsdgwy aiddedfypw tpdpsdvlvf vpydqeplng dwktqvqkkl kgAGQSSPAT GSQNQSGNtg siinnyymqq yqnsmstqlg dntisggsne gstdttstht tntqnndwfs klassaftgl fgalladkkt eettlleDRI LTTRNGHTTS TTQSSVGVTy gystEEDHVA GPNTSgletr vvqaerffkk flfdwttdkp fgyltklelp tdhhgvfghl vdsyaymrng wdvevsavgn qfnggcllva mvpewkafdt rekyqltlfp HQFISPRTNM tahitvpylg vnrydqykkh kpwtlvvmvl spltvsntaa pqikvyania ptyvhvagel pskegifpva cadgygglvt tdpktadpvy gkvynppktn ypgrftnlld vaeacptFLR FDDGKPYVVt raddtrllak fdvslaakhm sntylsgiaq yytqysgtin lhfmftgstd skarymvayi ppgvetppdt peeaahciha ewdtglnskf tfsipyvsaa dyaytasdta ettnvqgwvc vyqithgkae ndtllvsasa gKDFELRLPI DPRTQTTTTG ESADPVTTTV ENYGGDTQVQ RRhhtdvgfi mdrfvkinsl spthvidlmq thkhgivgal lraatyyfsd leivvrhdgn ltwvpngape aalsntsnpt aynkapftrl alpytaphrv latvydgtnk ysasdsrsgd lgsiaarvat qlpasfnyga iqaqaihell vrmkraelyc prpllaikvt sqdrykqkii apakqllnfd llklagdves nlgpfffadv rsnfsklvdt inqmqedmst khgpdfnrlv safeelatgv kaiRTGLDEA KPwyklikll srlscmaava arskdpvlva imladtglei ldstfvvkks sdslsslfhv papafsfgap vllaglvkva ssffrstped leraekqlka rdindifail kngewlvkli lairdwikaw iaseekfvtm tdlvPGILEK QRDLNDPGky keakewldna rqaclksgnv hianlckvVA PAPSKSRPEp vvvclrgksg qgksflanvl aqaisthftg ridsvwycpp dpdhfdgynq qtvvvmddlg qnpdgkdfky faqmvsttgf ippmasledk gkpfnskvii atTNLYSGFT Prtmvcpdal nrrfhfdIDV SAKDGYKinn kldiikaled thtnpvamfq ydcallngma vemkrlqqdm fkpqpplqnv yqlvqevier velhEKVSSH PIFKQISIPS qksvlyflie kgqheaaief fegmvhdsvk eelrpliqqt sfvkrafkrl kenfeivalc ltllanivim iretrkrqkm vddavneyie RANITTDDKT LDEAEKNPLE TSGASTVGFR ERSLTGQKVR DDVSSEPAQP AEDQPQAEGP YSGplerqkp lkvraklpQQ EGPYAGPMER QKPLKvkvka PVVKEGPYEG PVKKPVALkv karNLIVTES GAPPTDLQKM vmgntkpvel nldgktvaic catgvfgtay lvprhlfaek ydkimldgra mtdsdyrvfe feikvkgqdm lsdaalivlh rgncvrditk hFRDTARMKK GTPVVGVVNN Advgrlifsg ealtykdivv cmdgdtmpgl faykaatrag ycggavlakd gadtfivgth saggngvgyc scvsrsmlqk mkahVDPEPH HEGLIVDTRD VeervhvmrK TKLAPTVAYg vfnpefgpaa lsnkdprlne gvvlddviFS KHKGDAKMTE edkalfrrca adyasrlhsv lgtanaplsi yeaikgvdgl damepdtapg lpwalqgkrr galidfengt vgpeveaalk lmekreykfa cqtFLKDEIR PMEKVRAGKT RIVDVLPveh ilytkmmigr fcaqmhsnng pqigsavgcn pdvdwqrfgt hfaqyrnvwd vdysafdanh csdamnimfe evfrtdfgfh pnaewilktl vntehayenk ritveggmps gcsatsiint ilnniyvlya lrrhyegvel dtytmisygd divvasdydl dfealkphfk SLGQTITPAD KSDKGFvlgq sitdvtflkr hfhmdygtgf ykpvmasktl eailsfarrg tiqeklisva glavhsgpde yrrlfepfqg lFEIPSYRSL Ylrwvnavcg da
>P03306_REM465
196-216, 247-260, 862-869, 1202-1210, 1554-1581
mnttncfial vylireiktl frsrtkgkme ftlhngekkt fysrpnnhdn cwlntilqlf ryvdepffdw vynspenltl daikqlenft glelheggpp alviwnikhl lqtgigtasr psevcmvdgt dmcladfhag ifmkgqehav facvtsdgwy aiddedfypw tpdpsdvlvf vpydqeplng dwktqVQKKL KGAGQSSPAT GSQNQSgntg siinnyymqq yqnsmstqlg dntisgGSNE GSTDTTSTHT tntqnndwfs klassaftgl fgalladkkt eettlledri lttrnghtts ttqssvgvty gysteedhva gpntsgletr vvqaerffkk flfdwttdkp fgyltklelp tdhhgvfghl vdsyaymrng wdvevsavgn qfnggcllva mvpewkafdt rekyqltlfp hqfisprtnm tahitvpylg vnrydqykkh kpwtlvvmvl spltvsntaa pqikvyania ptyvhvagel pskegifpva cadgygglvt tdpktadpvy gkvynppktn ypgrftnlld vaeacptflr fddgkpyvvt raddtrllak fdvslaakhm sntylsgiaq yytqysgtin lhfmftgstd skarymvayi ppgvetppdt peeaahciha ewdtglnskf tfsipyvsaa dyaytasdta ettnvqgwvc vyqithgkae ndtllvsasa gkdfelrlpi dprtqttttg esadpvtttv enyggdtqvq rrhhtdvgfi mdrfvkinsl spthvidlmq thkhgivgal lraatyyfsd leivvrhdgn ltwvpngape aalsntsnpt aynkapftrl alpytaphrv latvydgtnk ySASDSRSGd lgsiaarvat qlpasfnyga iqaqaihell vrmkraelyc prpllaikvt sqdrykqkii apakqllnfd llklagdves nlgpfffadv rsnfsklvdt inqmqedmst khgpdfnrlv safeelatgv kairtgldea kpwyklikll srlscmaava arskdpvlva imladtglei ldstfvvkks sdslsslfhv papafsfgap vllaglvkva ssffrstped leraekqlka rdindifail kngewlvkli lairdwikaw iaseekfvtm tdlvpgilek qrdlndpgky keakewldna rqaclksgnv hianlckvva pAPSKSRPEP vvvclrgksg qgksflanvl aqaisthftg ridsvwycpp dpdhfdgynq qtvvvmddlg qnpdgkdfky faqmvsttgf ippmasledk gkpfnskvii attnlysgft prtmvcpdal nrrfhfdidv sakdgykinn kldiikaled thtnpvamfq ydcallngma vemkrlqqdm fkpqpplqnv yqlvqevier velhekvssh pifkqisips qksvlyflie kgqheaaief fegmvhdsvk eelrpliqqt sfvkrafkrl kenfeivalc ltllanivim iretrkrqkm vddavneyie ranittddkt ldeaeknple tsgastvgfr ersLTGQKVR DDVSSEPAQP AEDQPQAEGP Ysgplerqkp lkvraklpqq egpyagpmer qkplkvkvka pvvkegpyeg pvkkpvalkv karnlivtes gapptdlqkm vmgntkpvel nldgktvaic catgvfgtay lvprhlfaek ydkimldgra mtdsdyrvfe feikvkgqdm lsdaalivlh rgncvrditk hfrdtarmkk gtpvvgvvnn advgrlifsg ealtykdivv cmdgdtmpgl faykaatrag ycggavlakd gadtfivgth saggngvgyc scvsrsmlqk mkahvdpeph heglivdtrd veervhvmrk tklaptvayg vfnpefgpaa lsnkdprlne gvvlddvifs khkgdakmte edkalfrrca adyasrlhsv lgtanaplsi yeaikgvdgl damepdtapg lpwalqgkrr galidfengt vgpeveaalk lmekreykfa cqtflkdeir pmekvragkt rivdvlpveh ilytkmmigr fcaqmhsnng pqigsavgcn pdvdwqrfgt hfaqyrnvwd vdysafdanh csdamnimfe evfrtdfgfh pnaewilktl vntehayenk ritveggmps gcsatsiint ilnniyvlya lrrhyegvel dtytmisygd divvasdydl dfealkphfk slgqtitpad ksdkgfvlgq sitdvtflkr hfhmdygtgf ykpvmasktl eailsfarrg tiqeklisva glavhsgpde yrrlfepfqg lfeipsyrsl ylrwvnavcg da
| JOB-ID | P03306_001834ZimhWn8AAQEAAE7xNucAAAAC |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03306 |
| Description | sp|P03306|POLG_FMDV1 Genome polyprotein OS=Foot-and-mouth disease virus (strain A10-61) OX=12112 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 2332 |
| Download predictions | smoothed scores raw scores |