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>P03314_LOOPS
1-12, 32-45, 96-105, 136-189, 197-236, 280-341, 354-397, 405-415, 429-439, 446-455, 494-524, 550-568, 576-601, 609-620, 636-682, 699-718, 726-735, 775-818, 829-840, 858-941, 955-987, 997-1137, 1153-1161, 1212-1228, 1311-1321, 1349-1357, 1402-1416, 1436-1449, 1480-1498, 1514-1531, 1542-1555, 1567-1579, 1586-1648, 1678-1692, 1724-1743, 1755-1765, 1773-1782, 1802-1853, 1878-1894, 1915-1939, 1946-1973, 1985-2015, 2044-2091, 2179-2187, 2202-2210, 2225-2237, 2267-2295, 2333-2343, 2398-2421, 2458-2486, 2500-2513, 2531-2542, 2583-2594, 2601-2665, 2680-2689, 2708-2724, 2729-2737, 2750-2781, 2797-2826, 2848-2877, 2894-2903, 2930-2938, 2949-2964, 2996-3017, 3030-3054, 3086-3110, 3162-3182, 3201-3258, 3290-3316, 3329-3353, 3359-3369
MSGRKAQGKT LGvnmvrrgv rslsnkikqk tKQIGNRPGP SRGVQgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglSSRKR RSHDVltvqf lilgmllmtg gvtlvrknrw lllnvTSEDL GKTFSVGTGN CTTNILEAKY WCPDSMEYNC PNLSPREEPD DIDCWCYGVe nvrvayGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRMGErqlq kierwfvrnp ffavtaltia ylvgsnmtqr vviallvlaV GPAYSAHCIG ITDRDFIEGV HGGTWVSATL EQDKCVTVMA PDKPSLDISL ETVAIDRPAE Vrkvcynavl thvKINDKCP STGEAHLAEE NEGDNACKRT YSDRGWGNGC GLFGKGSiva cakfTCAKSM SLFEVdqtki qyviraqlHV GAKQENWNTd iktlkFDALS GSQEVefigy gkatlecqvq tavdfgnsyi aemeteswiv drqWAQDLTL PWQSGSGGVW REMHHLVEFE PPHAatirvl algnqegslk taltgamrvT KDTNDNNLYK LHGGHVSCrv klsalTLKGT SYKICTDKMF FVKNPTDTGH GtvvmqvkVS KGAPCRIPVI vaddltaain kgilvTVNPI ASTNDDEVLI EVNPPFGDSY IIVGRGDSRL TYQWHKEGSS IGklftqtmk gverlavmGD TAWDFSSAGG FFTSVGKGih tvfgsAFQGL FGGLNwitkv imgavliwvg intrnmtmsm smilvgvimm flslGVGADQ GCAINFGKRE LKCGDGIFIF RDSDDWLNKY SYYPEDPVkl asivkasfEE GKCGLNSVDS lehemwrsra deinaifEEN EVDISVVVQD PKNVYQRGTH PFSRIRDGLQ YGWKTWGKNL VFSPGRKNGS FIIDGKSRKE CPFSNRVWNS FQIEEFGTGV Fttrvymdav feytIDCDGS ILGAAVNGKK SAHGSPTFWM GSHEVNGtwm ihtleaLDYK ECEWPLTHTI GTSVEESEMF MPRSIGGPVS SHNHIPGYKV QTNGPWMQVP LEVKREACPG TSVIIDGNCD GRGKSTRSTT DSGKVIPEWC CRSCTMPPVS FHGSDGCWYP MEIRPRKTHE SHLVRSWVTA GEIHAVPfgl vsmmiamevv lrKRQGPKQM Lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sIRPGLLIGF GLRTLWSPre rlvltlgaam veialggvmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamff cavviigvlh QNFKDTSMQK Tiplvaltlt sylgltqpfl glcaflatRI FGRRSIPvne alaaaglvgv laglafqeme nflgpiavgg llmmlvsvag rVDGLELKKL GEVSWEeeae isgssarydv alseqGEFKL LSEEKVPWDq vvmtslalvg aalhpfalll vlagwlfhvR GARRSGDVLW DIPTPKIIee cehledgiyg ifqSTFLGAS QRGVGVAQGG Vfhtmwhvtr gAFLVRNGKK LIPSWasvke dlvaygGSWK LEGRWDGEEe vqliaAVPGK NVVNVQTKPS LFKVRNGGEI GAVALDYPSG TSGSPIVNRN GEVIGLYGNG ILVGDNSFvs aisqtevkee gkeelqeipt mlkkgmtTVL DFHPGAGKTR RFlpqilaec arrrlrtlvl aptrvvlsem keaFHGLDVK FHTQAFSAHG SGRevidamc hatlTYRMLE PTRVVnwevi imDEAHFLDP ASiaargwaa hraranesat iLMTATPPGT SDEFPHSNGE IEDVQTDIPS EPWNTGHDWI LADKRPTAWF LPSiraanvm aaslrkagks vvvlnrkTFE REYPTIKQKK PDFIlatdia emganlcver vldcRTAFKP VLVDEGRKVA IKGPLRISAs saaqrRGRIG RNPNRDGDSY YYSEPTSENN AHHvcwleas mlldNMEVRG GMVAPLYGVE GTKTPVSPGE MRLRDdqrkv frelvrncdl pvwlswqvak aglKTNDRKW CFEGPEEHEI LNDSGETVKC RAPGGAKKPL RPRWCDERVS Sdqsalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffMS PKGISRMsma mgtmagcgyl mFLGGVKPTH isyvmliffv lmvvVIPEPG QQRSIQDnqv ayliigiltl vsavaanelg mlektkEDLF GKKNLIPSSA SPWSWPDLDL KPGAAwtvyv givtmlspml hhwikveygn lslsgiaqsa svLSFMDKGI PFMkmnisvi mllvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhGVA ENPVVDGNPT VDIEEAPEMP Alyekklaly lllalslasv amcrtpfsla egivlasAAL GPLIEGNTSL LWNGPMAVSM TGVMRGnhya fvgvmynlwK MKTGRRGSAN GKTlgevwkr elnlldkrqf ELYKRTDIVE VDrdtarrhl aegkvdtgva vsrgtaklrw fhergyvkle grVIDLGCGR GGWCyyaaaq KEVSGVKGFT LGRDGHEKPM NVQSLGWNII TFKDKTDIHR LEPVKCDTLL CDIGESSSSS VTEGErtvrv ldtvekwlaC GVDNFCVKVl apympdvlek lellqrrFGG TVIRNPLSRN STHEmyyvSG ARSNVTFtvn qtsrllmrrM RRPTGKVTLE ADVILPIGTR SVETDKGPLD Keaieerver ikseymTSWF YDNDNPYRTW HYCGSYVTKT SGSAASmvng vikiltypwd rieevtrMAM TDTTPFGQQR VFKEKVDTRA KDPPAGTrki mkvvnrwlfr hlaREKNPRL CTKeefiakv rshaaigayl eeqeqwktaN EAVQDPKFwe lvdeerklHQ QGRCRTCVYN MMGKrekkls efgkakgsra iwymwlgary lefeaLGFLN EDHWASRENS GGGVEGIglq ylgyvirdlA AMDGGGFYAD DTAGWDTRIT EADLddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKAYMDV ISRRDQRGSG qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gCDRLKRMAV SGDDCVVRPI DDrfglalsh lnamskvrkd ISEWQPSKGW NDWENVPFCS HHFHELQLKD GRRIVVPCRE QDELIGRGRV SPGNGWMIke taclskayan mwslmyfhkr dmrllslavS SAVPTSWVPQ GRTTWSIHGK GEWMTTedml evwnrvwiTN NPHMQDKTMV KKWRDVPYLT KRQdklcgSL IGMTNRATWa shihlvihri rtligqekyt dyltvmdrys vdadlqlgel i
>P03314_HOTLOOPS
1-43, 72-81, 92-105, 136-153, 196-233, 332-340, 367-376, 429-438, 829-840, 872-888, 897-908, 1062-1087, 1406-1428, 1484-1493, 1585-1608, 1874-1892, 1919-1957, 2000-2014, 2026-2034, 2058-2085, 2399-2411, 2505-2516, 2524-2580, 2633-2644, 2653-2667, 2710-2721, 2726-2739, 2748-2783, 2851-2880, 2890-2902, 2946-2966, 3086-3095, 3239-3256, 3292-3313, 3330-3342, 3404-3411
MSGRKAQGKT LGVNMVRRGV RSLSNKIKQK TKQIGNRPGP SRGvqgfiff flfniltgkk itahlkrlwk mLDPRQGLAV Lrkvkrvvas lMRGLSSRKR RSHDVltvqf lilgmllmtg gvtlvrknrw lllnvTSEDL GKTFSVGTGN CTTnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaYGKCD SAGRSRRSRR AIDLPTHENH GLKTRQEKWM TGRmgerqlq kierwfvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl eTVAIDRPAE vrkvcynavl thvkindkcp stgeahLAEE NEGDNAckrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlHV GAKQENWNtd iktlkfdals gsqevefigy gkatlecqvq tavdfgnsyi aemeteswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykictdkmf fvknptdtgh gtvvmqvkvs kgapcripvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgrgdsrl tyqwhkegss igklftqtmk gverlavmgd tawdfssagg fftsvgkgih tvfgsafqgl fgglnwitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfEE GKCGLNSVDS lehemwrsra deinaifeen evdisvvvqd pKNVYQRGTH PFSRIRDGlq ygwktwGKNL VFSPGRKNgs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levkreacpg tSVIIDGNCD GRGKSTRSTT DSGKVIPewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggvmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamff cavviigvlh qnfkdtsmqk tiplvaltlt sylgltqpfl glcaflatri fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg llmmlvsvag rvdglELKKL GEVSWEEEAE ISGSSARYdv alseqgefkl lseekvpwdq vvmtslalvg aalhpfalll vlagwlfhvr garRSGDVLW DIPtpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliAAVPGK NVVNVQTKPS LFKVRNGGei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtevkee gkeelqeipt mlkkgmttvl dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrvvnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvLNRKTFE REYPTIKQKK PDfilatdia emganlcver vldcrtafKP VLVDEGRKVA IKGPLRISAS SAAQRRGRIG RNPNRDGdsy yyseptsenn ahhvcwleas mlldnmevrg gmvaplygvE GTKTPVSPGE MRLRddqrkv frelvRNCDL PVWLswqvak aglktndrkw cfegpeeHEI LNDSGETVKC RAPGGAKKPL RPRWCdervs sdqsalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyvmliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsavaanelg mlektkedlf gkknlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi mllvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgVA ENPVVDGNPT Vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnhya fvgvmynlwk mktgRRGSAN GKTLGEvwkr elnLLDKRQF ELYKRTDIVE VDRDTARRHL AEGKVDTGVA VSRGTAKLRW FHERGYVKLE grvidlgcgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfKDKTDIHR LEPVkcdtll cdIGESSSSS VTEGERTvrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgG TVIRNPLSRN SthemYYVSG ARSNVTFTVn qtsrllmRRM RRPTGKVTLE ADVILPIGTR SVETDKGPLD KEAieerver ikseymtswf ydndnpyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam TDTTPFGQQR VFKEKVDTRA KDPPAGTRKI mkvvnrwlfR HLAREKNPRL CTkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeeRKLHQ QGRCRTCVYN MMGKREkkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvKVLRP APGGKaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gcdrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelqlkd grrivvpcRE QDELIGRGRV SPGNGWmike taclskayan mwslmyfhkr dmrllslavs sAVPTSWVPQ GRTTWSIHGK GEWmttedml evwnrvwitN NPHMQDKTMV KKwrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdrys vdaDLQLGEL I
>P03314_REM465
1-9, 1072-1082, 1415-1424, 1656-1664, 1939-1947, 2085-2094, 2656-2667
MSGRKAQGKt lgvnmvrrgv rslsnkikqk tkqignrpgp srgvqgfiff flfniltgkk itahlkrlwk mldprqglav lrkvkrvvas lmrglssrkr rshdvltvqf lilgmllmtg gvtlvrknrw lllnvtsedl gktfsvgtgn cttnileaky wcpdsmeync pnlspreepd didcwcygve nvrvaygkcd sagrsrrsrr aidlpthenh glktrqekwm tgrmgerqlq kierwfvrnp ffavtaltia ylvgsnmtqr vviallvlav gpaysahcig itdrdfiegv hggtwvsatl eqdkcvtvma pdkpsldisl etvaidrpae vrkvcynavl thvkindkcp stgeahlaee negdnackrt ysdrgwgngc glfgkgsiva cakftcaksm slfevdqtki qyviraqlhv gakqenwntd iktlkfdals gsqevefigy gkatlecqvq tavdfgnsyi aemeteswiv drqwaqdltl pwqsgsggvw remhhlvefe pphaatirvl algnqegslk taltgamrvt kdtndnnlyk lhgghvscrv klsaltlkgt sykictdkmf fvknptdtgh gtvvmqvkvs kgapcripvi vaddltaain kgilvtvnpi astnddevli evnppfgdsy iivgrgdsrl tyqwhkegss igklftqtmk gverlavmgd tawdfssagg fftsvgkgih tvfgsafqgl fgglnwitkv imgavliwvg intrnmtmsm smilvgvimm flslgvgadq gcainfgkre lkcgdgifif rdsddwlnky syypedpvkl asivkasfee gkcglnsvds lehemwrsra deinaifeen evdisvvvqd pknvyqrgth pfsrirdglq ygwktwgknl vfspgrkngs fiidgksrke cpfsnrvwns fqieefgtgv fttrvymdav feytidcdgs ilgaavngkk sahgsptfwm gshevngtwm ihtlealdyk ecewplthti gtsveesemf mprsiggpvs shnhipgykv qtngpwmqvp levkreacpg tsviidgncd gRGKSTRSTT DSgkvipewc crsctmppvs fhgsdgcwyp meirprkthe shlvrswvta geihavpfgl vsmmiamevv lrkrqgpkqm lvggvvllga mlvgqvtlld llkltvavgl hfhemnnggd amymaliaaf sirpglligf glrtlwspre rlvltlgaam veialggvmg glwkylnavs lciltinava srkasntilp lmalltpvtm aevrlaamff cavviigvlh qnfkdtsmqk tiplvaltlt sylgltqpfl glcaflatri fgrrsipvne alaaaglvgv laglafqeme nflgpiavgg llmmlvsvag rvdglelkkl gevsWEEEAE ISGSsarydv alseqgefkl lseekvpwdq vvmtslalvg aalhpfalll vlagwlfhvr garrsgdvlw diptpkiiee cehledgiyg ifqstflgas qrgvgvaqgg vfhtmwhvtr gaflvrngkk lipswasvke dlvayggswk legrwdgeee vqliaavpgk nvvnvqtkps lfkvrnggei gavaldypsg tsgspivnrn geviglygng ilvgdnsfvs aisqtEVKEE GKEElqeipt mlkkgmttvl dfhpgagktr rflpqilaec arrrlrtlvl aptrvvlsem keafhgldvk fhtqafsahg sgrevidamc hatltyrmle ptrvvnwevi imdeahfldp asiaargwaa hraranesat ilmtatppgt sdefphsnge iedvqtdips epwntghdwi ladkrptawf lpsiraanvm aaslrkagks vvvlnrktfe reyptikqkk pdfilatdia emganlcver vldcrtafkp vlvdegrkva ikgplrisAS SAAQRRGrig rnpnrdgdsy yyseptsenn ahhvcwleas mlldnmevrg gmvaplygve gtktpvspge mrlrddqrkv frelvrncdl pvwlswqvak aglktndrkw cfegpeehei lndsgetvkc rapggakkpl rprwCDERVS SDQSalsefi kfaegrrgaa evlvvlselp dflakkggea mdtisvflhs eegsrayrna lsmmpeamti vmlfilagll tsgmviffms pkgisrmsma mgtmagcgyl mflggvkpth isyvmliffv lmvvvipepg qqrsiqdnqv ayliigiltl vsavaanelg mlektkedlf gkknlipssa spwswpdldl kpgaawtvyv givtmlspml hhwikveygn lslsgiaqsa svlsfmdkgi pfmkmnisvi mllvsgwnsi tvmpllcgig camlhwslil pgikaqqskl aqrrvfhgva enpvvdgnpt vdieeapemp alyekklaly lllalslasv amcrtpfsla egivlasaal gpliegntsl lwngpmavsm tgvmrgnhya fvgvmynlwk mktgrrgsan gktlgevwkr elnlldkrqf elykrtdive vdrdtarrhl aegkvdtgva vsrgtaklrw fhergyvkle grvidlgcgr ggwcyyaaaq kevsgvkgft lgrdghekpm nvqslgwnii tfkdktdihr lepvkcdtll cdigeSSSSS VTEGERTvrv ldtvekwlac gvdnfcvkvl apympdvlek lellqrrfgg tvirnplsrn sthemyyvsg arsnvtftvn qtsrllmrrm rrptgkvtle advilpigtr svetdkgpld keaieerver ikseymtswf ydndnpyrtw hycgsyvtkt sgsaasmvng vikiltypwd rieevtrmam tdttpfgqqr vfkekvdtra kdppagtrki mkvvnrwlfr hlareknprl ctkeefiakv rshaaigayl eeqeqwktan eavqdpkfwe lvdeerklhq qgrcrtcvyn mmgkrekkls efgkakgsra iwymwlgary lefealgfln edhwasrens gggvegiglq ylgyvirdla amdgggfyad dtagwdtrit eadlddeqei lnymsphhkk laqavmemty knkvvkvlrp apggkaymdv isrrdqrgsg qvvtyalnti tnlkvqlirm aeaemvihhq hvqdcdesvl trleawlteh gcdrlkrmav sgddcvvrpi ddrfglalsh lnamskvrkd isewqpskgw ndwenvpfcs hhfhelqlkd grrivvpcre qdeligrgrv spgngwmike taclskayan mwslmyfhkr dmrllslavs savptswvpq grttwsihgk gewmttedml evwnrvwitn nphmqdktmv kkwrdvpylt krqdklcgsl igmtnratwa shihlvihri rtligqekyt dyltvmdrys vdadlqlgel i
| JOB-ID | P03314_180909ZivtxX8AAQEAAHG53x8AAAAI |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03314 |
| Description | sp|P03314|POLG_YEFV1 Genome polyprotein OS=Yellow fever virus (strain 17D vaccine) OX=11090 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 3411 |
| Download predictions | smoothed scores raw scores |