>P03316_LOOPS
1-38, 55-104, 116-124, 134-222, 247-268, 277-308, 321-392, 398-440, 446-482, 489-549, 555-683, 721-738, 762-770, 806-821, 827-834, 842-908, 955-1122, 1127-1146, 1160-1169, 1176-1201
MNRGFFNMLG RRPFPAPTAM WRPRRRRQAA PMPARNGLas qiqqlttavs alviGQATRP QPPRPRPPPR QKKQAPKQPP KPKKPKTQEK KKKQPAKPKP GKRQrmalkl eadrlFDVKN EDGDvighal ameGKVMKPL HVKGTIDHPV LSKLKFTKSS AYDMEFAQLP VNMRSEAFTY TSEHPEGFYN WHHGAVQYSG GRFTIPRGVG GRGDSGRPIM DNsgrvvaiv lggadegtrt alsvvtWNSK GKTIKTTPEG TEEWSAAPlv tamcllGNVS FPCDRPPTCY TREPSRALDI LEENVNHEay dtllnailrc GSSGRSKRSV IDDFTLTSPY LGTCSYCHHT VPCFSPVKIE QVWDEADDNT IRIQTSAQFG YDQSGAASAN KYrymslKQD HTVKEGTMDD IKISTSGPCR RLSYKGYFLL AKCPPGDSVT vsivsSNSAT SCTLARKIKP KFVGREKYDL PPVHGKKIPC TVydrlkeTT AGYITMHRPR PHAYTSYLEE SSGKVYAKPP SGKNITYECK CGDYKTGTVS TRTEITGCTa ikqcVAYKSD QTKWVFNSPD LIRHDDHTAQ GKLHLPFKLI PSTCMVPVAH APNVIHGFKH ISLQLDTDHL TLLTTRRLGA NPEPTTEWIV GKTVRNFTVD RDGLEYIWGN HEPVRVYAQE SAPGDPHGWP HEIvqhyyhr hpvytilava satvammigv tvavlcacka RRECLTPYAL APNAVIPTsl allccvrsan aetftetmsy lWSNSQPFFW vqlciplaaf ivlmrccscc lpflvvagay lakvdAYEHA TTVPNVPQIP YkalveRAGY APLNleitvm sSEVLPSTNQ EYITCKFTTV VPSPKIKCCG SLECQPAAHA DYTCKVFGGV YPFMWGGAQC FCDSENSQms eayvelsadc asdhaqaikv htaamkvglr ivygnttsfl dvyvNGVTPG TSKDLKVIAG PISASFTPFD HKVVIHRGLV YNYDFPEYGA MKPGAFGDIQ ATSLTSKDLI ASTDIRLLKP SAKNVHVPYT QASSGFEMWK NNSGRPLQET APFGCKIAVN PLRAVDCSYG NIPISIDIPN AAFIRTSDAP LVSTVKCEVS ECTYSADFGG MAtlqyVSDR EGQCPVHSHS STATLQestv hvlekgavtV HFSTASPQAn fivslCGKKT TCNAECKPPA DHIVSTPHKN Dqefqaaisk tswswlfalf ggasslliig lmifacsmml tstrr
>P03316_HOTLOOPS
1-24, 57-106, 232-264, 375-389, 400-420, 445-483, 491-500, 626-647, 811-820, 1025-1036
MNRGFFNMLG RRPFPAPTAM WRPRrrrqaa pmparnglas qiqqlttavs alvigqATRP QPPRPRPPPR QKKQAPKQPP KPKKPKTQEK KKKQPAKPKP GKRQRMalkl eadrlfdvkn edgdvighal amegkvmkpl hvkgtidhpv lsklkftkss aydmefaqlp vnmrseafty tsehpegfyn whhgavqysg grftiprgvg grgdsgrpim dnsgrvvaiv lGGADEGTRT ALSVVTWNSK GKTIKTTPEG TEEWsaaplv tamcllgnvs fpcdrpptcy trepsraldi leenvnheay dtllnailrc gssgrskrsv iddftltspy lgtcsychht vpcfspvkie qvwdeaddnt iriqTSAQFG YDQSGAASAn kyrymslkqD HTVKEGTMDD IKISTSGPCR rlsykgyfll akcppgdsvt vsivSSNSAT SCTLARKIKP KFVGREKYDL PPVHGKKIPC TVYdrlkett AGYITMHRPR phaytsylee ssgkvyakpp sgknityeck cgdyktgtvs trteitgcta ikqcvayksd qtkwvfnspd lirhddhtaq gklhlpfkli pstcmvpvah apnvihgfkh islqldtdhl tllttRRLGA NPEPTTEWIV GKTVRNFtvd rdgleyiwgn hepvrvyaqe sapgdphgwp heivqhyyhr hpvytilava satvammigv tvavlcacka rrecltpyal apnaviptsl allccvrsan aetftetmsy lwsnsqpffw vqlciplaaf ivlmrccscc lpflvvagay lakvdayeha TTVPNVPQIP ykalveragy aplnleitvm ssevlpstnq eyitckfttv vpspkikccg slecqpaaha dytckvfggv ypfmwggaqc fcdsensqms eayvelsadc asdhaqaikv htaamkvglr ivygnttsfl dvyvngvtpg tskdlkviag pisasftpfd hkvvihrglv ynydfpeyga mkpgafgdiq atsltskdli astdIRLLKP SAKNVHvpyt qassgfemwk nnsgrplqet apfgckiavn plravdcsyg nipisidipn aafirtsdap lvstvkcevs ectysadfgg matlqyvsdr egqcpvhshs statlqestv hvlekgavtv hfstaspqan fivslcgkkt tcnaeckppa dhivstphkn dqefqaaisk tswswlfalf ggasslliig lmifacsmml tstrr
>P03316_REM465
57-103, 1129-1144
mnrgffnmlg rrpfpaptam wrprrrrqaa pmparnglas qiqqlttavs alvigqATRP QPPRPRPPPR QKKQAPKQPP KPKKPKTQEK KKKQPAKPKP GKRqrmalkl eadrlfdvkn edgdvighal amegkvmkpl hvkgtidhpv lsklkftkss aydmefaqlp vnmrseafty tsehpegfyn whhgavqysg grftiprgvg grgdsgrpim dnsgrvvaiv lggadegtrt alsvvtwnsk gktikttpeg teewsaaplv tamcllgnvs fpcdrpptcy trepsraldi leenvnheay dtllnailrc gssgrskrsv iddftltspy lgtcsychht vpcfspvkie qvwdeaddnt iriqtsaqfg ydqsgaasan kyrymslkqd htvkegtmdd ikistsgpcr rlsykgyfll akcppgdsvt vsivssnsat sctlarkikp kfvgrekydl ppvhgkkipc tvydrlkett agyitmhrpr phaytsylee ssgkvyakpp sgknityeck cgdyktgtvs trteitgcta ikqcvayksd qtkwvfnspd lirhddhtaq gklhlpfkli pstcmvpvah apnvihgfkh islqldtdhl tllttrrlga npepttewiv gktvrnftvd rdgleyiwgn hepvrvyaqe sapgdphgwp heivqhyyhr hpvytilava satvammigv tvavlcacka rrecltpyal apnaviptsl allccvrsan aetftetmsy lwsnsqpffw vqlciplaaf ivlmrccscc lpflvvagay lakvdayeha ttvpnvpqip ykalveragy aplnleitvm ssevlpstnq eyitckfttv vpspkikccg slecqpaaha dytckvfggv ypfmwggaqc fcdsensqms eayvelsadc asdhaqaikv htaamkvglr ivygnttsfl dvyvngvtpg tskdlkviag pisasftpfd hkvvihrglv ynydfpeyga mkpgafgdiq atsltskdli astdirllkp saknvhvpyt qassgfemwk nnsgrplqet apfgckiavn plravdcsyg nipisidipn aafirtsdap lvstvkcevs ectysadfgg matlqyvsDR EGQCPVHSHS STATlqestv hvlekgavtv hfstaspqan fivslcgkkt tcnaeckppa dhivstphkn dqefqaaisk tswswlfalf ggasslliig lmifacsmml tstrr
JOB-ID | P03316_114820Zgaqg38AAQEAAF8-stgAAABI |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P03316 |
Description | sp|P03316|POLS_SINDV Structural polyprotein OS=Sindbis virus OX=11034 PE=1 SV=1 |
Title/ID | none |
Sequence length | 1245 |
Download predictions | smoothed scores raw scores |