>P03347_LOOPS
1-30, 43-54, 64-72, 119-149, 162-183, 210-239, 249-260, 275-294, 349-358, 381-425, 435-512
MGARASVLSG GELDRWEKIR LRPGGKKKYK lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaAA DTGHSSQVSQ NYPIVQNIQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaA EWDRVHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamsqv tntatimmqr GNFRNQRKMV KCFNCGKEGH TARNCRAPRK KGCWKCGKEG HQMKDcterq anflGKIWPS YKGRPGNFLQ SRPEPTAPPF LQSRPEPTAP PEESFRSGVE TTTPPQKQEP IDKELYPLTS LRSLFGNDPS SQ
>P03347_HOTLOOPS
1-32, 121-129, 280-292, 397-411, 458-512
MGARASVLSG GELDRWEKIR LRPGGKKKYK LKhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaaa DTGHSSQVSq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tntatimmqr gnfrnqrkmv kcfncgKEGH TARNCRAPRK Kgcwkcgkeg hqmkdcterq anflgkiwps ykgrpgnflq srpeptaPPF LQSRPEPTAP PEESFRSGVE TTTPPQKQEP IDKELYPLTS LRSLFGNDPS SQ
>P03347_REM465
1-9, 106-128, 463-487
MGARASVLSg geldrwekir lrpggkkkyk lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieEEQNK SKKKAQQAAA DTGHSSQVsq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tntatimmqr gnfrnqrkmv kcfncgkegh tarncraprk kgcwkcgkeg hqmkdcterq anflgkiwps ykgrpgnflq srpeptappf lqSRPEPTAP PEESFRSGVE TTTPPQKqep idkelyplts lrslfgndps sq
JOB-ID | P03347_210745ZiA6IX8AAQEAADAZ0wAAAABH |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P03347 |
Description | sp|P03347|GAG_HV1B1 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate BH10) OX=11678 GN=gag PE=1 SV=3 |
Title/ID | none |
Sequence length | 512 |
Download predictions | smoothed scores raw scores |