Download PostScript file
>P03349_LOOPS
1-30, 43-54, 64-72, 122-151, 164-185, 212-241, 251-262, 277-296, 351-360, 371-427, 437-502
MGARASVLSG GELDKWEKIR LRPGGKKKYK lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq ridvkdtkea lekieeeqnk skkkaqqaaa aAGTGNSSQV SQNYPIVQNL QGQMVHQAIS Prtlnawvkv veeKAFSPEV IPMFSALSEG ATPQDlntml ntvgghqaam qmlketinee aAEWDRVHPV HAGPIAPGQM REPRGSDIAG Ttstlqeqig WMTNNPPIPV GEiykrwiil glnkivRMYS PTSILDIRQG PKEPFRdyvd rfyktlraeq asqdvknwmt etllvqnanp dcktilkalg paatleemmt ACQGVGGPGH karvlaeams QVTNPANIMM QRGNFRNQRK TVKCFNCGKE GHIAKNCRAP RKKGCWRCGR EGHQMKDcte rqanflGKIW PSYKGRPGNF LQSRPEPTAP PEESFRFGEE KTTPSQKQEP IDKELYPLTS LRSLFGNDPS SQ
>P03349_HOTLOOPS
1-31, 123-131, 282-294, 395-428, 459-502
MGARASVLSG GELDKWEKIR LRPGGKKKYK Lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq ridvkdtkea lekieeeqnk skkkaqqaaa aaGTGNSSQV Sqnypivqnl qgqmvhqais prtlnawvkv veekafspev ipmfsalseg atpqdlntml ntvgghqaam qmlketinee aaewdrvhpv hagpiapgqm reprgsdiag ttstlqeqig wmtnnppipv geiykrwiil glnkivrmys pTSILDIRQG PKEPfrdyvd rfyktlraeq asqdvknwmt etllvqnanp dcktilkalg paatleemmt acqgvggpgh karvlaeams qvtnpanimm qrgnfrnqrk tvkcFNCGKE GHIAKNCRAP RKKGCWRCGR EGHQMKDCte rqanflgkiw psykgrpgnf lqsrpeptAP PEESFRFGEE KTTPSQKQEP IDKELYPLTS LRSLFGNDPS SQ
>P03349_REM465
1-9, 106-129, 454-478
MGARASVLSg geldkwekir lrpggkkkyk lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq ridvkdtkea lekieEEQNK SKKKAQQAAA AAGTGNSSQv sqnypivqnl qgqmvhqais prtlnawvkv veekafspev ipmfsalseg atpqdlntml ntvgghqaam qmlketinee aaewdrvhpv hagpiapgqm reprgsdiag ttstlqeqig wmtnnppipv geiykrwiil glnkivrmys ptsildirqg pkepfrdyvd rfyktlraeq asqdvknwmt etllvqnanp dcktilkalg paatleemmt acqgvggpgh karvlaeams qvtnpanimm qrgnfrnqrk tvkcfncgke ghiakncrap rkkgcwrcgr eghqmkdcte rqanflgkiw psykgrpgnf lqsRPEPTAP PEESFRFGEE KTTPSQKQep idkelyplts lrslfgndps sq
| JOB-ID | P03349_125803Zj9rW38AAQEAAHbYjlcAAAAQ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03349 |
| Description | sp|P03349|GAG_HV1A2 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) OX=11685 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 502 |
| Download predictions | smoothed scores raw scores |