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>P03354_LOOPS
13-23, 36-54, 98-219, 230-255, 266-274, 282-293, 322-365, 385-402, 413-438, 445-455, 463-472, 493-589, 596-604, 614-675, 716-739, 751-767, 787-828, 835-884, 916-954, 967-999, 1019-1032, 1042-1064, 1088-1108, 1119-1134, 1144-1177, 1203-1213, 1225-1232, 1255-1284, 1316-1356, 1393-1408, 1421-1431, 1453-1464, 1479-1516, 1526-1603
meavikviss acKTYCGKTS PSKkeigaml sllqkEGLLM SPSDLYSPGS WDPItaalsq ramilgksge lktwglvlga lkaareeqvt seqakfwLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV GTSCYHCGTA IGCNCATASA PPPPYVGSGL YPSLAGVGEQ QGQGGDTPPG AEQSRAEPGH AGQAPGPALt dwarvreelA STGPPVVAMP VVIKTEGPAW TPLEPklitr ladtvRTKGL RSPItmaeve aLMSSPLLPH DVTnlmrvil gpapyalwmd awgvqlqtvi aAATRDPRHP ANGQGRGERT NLNRLKGLAD GMVGNPQGQA ALLRPgelva itasalqafr evarLAEPAG PWADIMQGPS ESfvdfanrl ikAVEGSDLP PSARAPVIID CFRQKSQPdi qqliRTAPST LTTPGeiiky vlDRQKTAPL TDqgiaaams saiqplimav vnRERDGQTG SGGRARGLCY TCGSPGHYQA QCPKKRKSGN SRERCQLCNG MGHNAKQCRK RDGNQGQRPG KGLSSGPWPG PEPPAVSLAM TMEHKDRPLv rviltNTGSH PVKQrsvyit allDSGADIT IISEEDWPTD WPVMEAANPQ IHGIGGGIPM RKSRDMIELG VINRDGSLER PLLLFpavam vrgsilgrdc lqglglrltn ligratvltv alhlaIPLKW KPDHTPVWID QWPLPEGKLv altqlvekel QLGHIEPSLS CWNTPVFvir kasgsyrllh dlravnAKLV PFGAVQQGAP VLSALPRGWP LMVLDLKDCF FSIPLAEQdr eafaFTLPSV NNQAPARRFQ WKVLPQGMTC SPTICQLVVG QVLEPLRLKH PSLCmlhymd dlllaasshd gleaageevi stlerAGFTI SPDKVQREPG VQYLGYKLGS TYVAPVGLVA EPRIatlwdv qklvgsLQWL RPALGIPPRL MGPFYEQLRG SDPNEAREWn ldmkmawrei vrlsttaaLE RWDPALPLEG AVarceqgai gVLGQGLSTH PRPCLWLFST QPTKaftawl evltllitkl rasavrtFGK EVDILLLPAC FREDLPLPeg illalkgfAG KIRSSDTPSI FDIArplhvs lkvRVTDHPV PGPTVFTDAS SSTHKGVVVW REGPRWEike iadlgasvqq learavamal llWPTTPTNV VTDsafvakm llkmGQEGVP STaaafiled alsqrsamaa vlhvRSHSEV PGFFTEGNDV ADSQATFQAY PLREakdlht alhigprals kacnismqqa revvqTCPHC NSAPALEAGV NPRGLGPLQI WQTDFTLEPR MAPRSWlavt vdtassaivv tqhgrvtsva vqhhwataia vlGRPKAIKT DNGSCFTSks trewlarwgi AHTTGIPGNS Qgqamveran rllkdrirvl aeGDGFMKRI PTSKqgella kamyalnhFE RGENTKTPIQ KHWRPTVLTE GPPVKIRIET GEWEKGwnvl vwgrgYAAVK NRDTDKVIWV PSRKVKPDIT QKDEVTKKDE ASPLFAGISD WIPWEDEQEG LQGETASNKQ ERPGEDTLAA NES
>P03354_HOTLOOPS
10-23, 97-150, 231-241, 246-257, 325-341, 414-424, 445-455, 520-531, 540-570, 595-605, 753-764, 918-929, 1152-1168, 1390-1405, 1423-1433, 1450-1465, 1481-1519, 1528-1565, 1583-1603
meavikvisS ACKTYCGKTS PSKkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramilgksge lktwglvlga lkaareeqvt seqakfWLGL GGGRVSPPGP ECIEKPATER RIDKGEEVGE TTVQRDAKMA PEETATPKTV gtscyhcgta igcncatasa ppppyvgsgl ypslagvgeq qgqggdtppg aeqsraepgh agqapgpalt dwarvreela STGPPVVAMP VviktEGPAW TPLEPKLitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaatRDPRHP ANGQGRGERT Nlnrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwadimqgps esfvdfanrl ikaVEGSDLP PSARapviid cfrqksqpdi qqliRTAPST LTTPGeiiky vldrqktapl tdqgiaaams saiqplimav vnrerdgqtg sggrarglcy tcgspghyqA QCPKKRKSGN SrercqlcnG MGHNAKQCRK RDGNQGQRPG KGLSSGPWPG peppavslam tmehkdrplv rvilTNTGSH PVKQRsvyit alldsgadit iiseedwptd wpvmeaanpq ihgigggipm rksrdmielg vinrdgsler plllfpavam vrgsilgrdc lqglglrltn ligratvltv alhlaiplkw kpdhtpvwid qwplpegklv altqlvekel qlGHIEPSLS CWNTpvfvir kasgsyrllh dlravnaklv pfgavqqgap vlsalprgwp lmvldlkdcf fsiplaeqdr eafaftlpsv nnqaparrfq wkvlpqgmtc spticqlvvg qvleplrlkh pslcmlhymd dlllaasshd gleaageevi stleragFTI SPDKVQREPg vqylgyklgs tyvapvglva epriatlwdv qklvgslqwl rpalgipprl mgpfyeqlrg sdpnearewn ldmkmawrei vrlsttaale rwdpalpleg avarceqgai gvlgqglsth prpclwlfst qptkaftawl evltllitkl rasavrtfgk evdilllpac fredlplpeg illalkgfag kirssdtpsi fdiarplhvs lkvrvtdhpv pGPTVFTDAS SSTHKGVVvw regprweike iadlgasvqq learavamal llwpttptnv vtdsafvakm llkmgqegvp staaafiled alsqrsamaa vlhvrshsev pgfftegndv adsqatfqay plreakdlht alhigprals kacnismqqa revvqtcphc nsapaleagv nprglgplqi wqtdftlepr maprswlavt vdtassaivv tqhgrvtsva vqhhwataiA VLGRPKAIKT DNGSCftsks trewlarwgi ahTTGIPGNS QGQamveran rllkdrirvL AEGDGFMKRI PTSKQgella kamyalnhfe RGENTKTPIQ KHWRPTVLTE GPPVKIRIET GEWEKGWNVl vwgrgyaAVK NRDTDKVIWV PSRKVKPDIT QKDEVTKKDE ASPLFagisd wipwedeqeg lqGETASNKQ ERPGEDTLAA NES
>P03354_REM465
189-216, 495-502, 518-532, 544-566, 1580-1603
meavikviss acktycgkts pskkeigaml sllqkegllm spsdlyspgs wdpitaalsq ramilgksge lktwglvlga lkaareeqvt seqakfwlgl gggrvsppgp eciekpater ridkgeevge ttvqrdakma peetatpktv gtscyhcgta igcncatasa ppppyvgsgl ypslagvgEQ QGQGGDTPPG AEQSRAEPGH AGQAPGpalt dwarvreela stgppvvamp vviktegpaw tplepklitr ladtvrtkgl rspitmaeve almsspllph dvtnlmrvil gpapyalwmd awgvqlqtvi aaatrdprhp angqgrgert nlnrlkglad gmvgnpqgqa allrpgelva itasalqafr evarlaepag pwadimqgps esfvdfanrl ikavegsdlp psarapviid cfrqksqpdi qqlirtapst lttpgeiiky vldrqktapl tdqgiaaams saiqplimav vnreRDGQTG SGgrarglcy tcgspghYQA QCPKKRKSGN SRercqlcng mghNAKQCRK RDGNQGQRPG KGLSSGpwpg peppavslam tmehkdrplv rviltntgsh pvkqrsvyit alldsgadit iiseedwptd wpvmeaanpq ihgigggipm rksrdmielg vinrdgsler plllfpavam vrgsilgrdc lqglglrltn ligratvltv alhlaiplkw kpdhtpvwid qwplpegklv altqlvekel qlghiepsls cwntpvfvir kasgsyrllh dlravnaklv pfgavqqgap vlsalprgwp lmvldlkdcf fsiplaeqdr eafaftlpsv nnqaparrfq wkvlpqgmtc spticqlvvg qvleplrlkh pslcmlhymd dlllaasshd gleaageevi stleragfti spdkvqrepg vqylgyklgs tyvapvglva epriatlwdv qklvgslqwl rpalgipprl mgpfyeqlrg sdpnearewn ldmkmawrei vrlsttaale rwdpalpleg avarceqgai gvlgqglsth prpclwlfst qptkaftawl evltllitkl rasavrtfgk evdilllpac fredlplpeg illalkgfag kirssdtpsi fdiarplhvs lkvrvtdhpv pgptvftdas ssthkgvvvw regprweike iadlgasvqq learavamal llwpttptnv vtdsafvakm llkmgqegvp staaafiled alsqrsamaa vlhvrshsev pgfftegndv adsqatfqay plreakdlht alhigprals kacnismqqa revvqtcphc nsapaleagv nprglgplqi wqtdftlepr maprswlavt vdtassaivv tqhgrvtsva vqhhwataia vlgrpkaikt dngscftsks trewlarwgi ahttgipgns qgqamveran rllkdrirvl aegdgfmkri ptskqgella kamyalnhfe rgentktpiq khwrptvlte gppvkiriet gewekgwnvl vwgrgyaavk nrdtdkviwv psrkvkpdit qkdevtkkde asplfagisd wipwedeqeG LQGETASNKQ ERPGEDTLAA NES
| JOB-ID | P03354_012424ZiHHx38AAQEAAHI6W1kAAAAR |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03354 |
| Description | sp|P03354|POL_RSVP Gag-Pol polyprotein OS=Rous sarcoma virus subgroup C (strain Prague) OX=11888 GN=gag-pol PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1603 |
| Download predictions | smoothed scores raw scores |