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>P03355_LOOPS
1-18, 24-33, 39-59, 67-251, 293-327, 342-365, 378-393, 431-438, 485-562, 567-628, 641-733, 742-807, 813-858, 944-957, 964-998, 1012-1025, 1031-1067, 1081-1093, 1102-1114, 1125-1152, 1160-1188, 1209-1216, 1235-1242, 1257-1272, 1285-1305, 1321-1343, 1366-1378, 1402-1414, 1437-1465, 1477-1486, 1501-1519, 1535-1549, 1565-1572, 1583-1621, 1647-1693, 1705-1718, 1726-1738
MGQTVTTPLS LTLGHWKDve riaHNQSVDV KKRrwvtfCS AEWPTFNVGW PRDGTFNRDl itqvkiKVFS PGPHGHPDQV PYIVTWEALA FDPPPWVKPF VHPKPPPPLP PSAPSLPLEP PRSTPPRSSL YPALTPSLGA KPKPQVLSDS GGPLIDLLTE DPPPYRDPRP PPSDRDGNGG EATPAGEAPD PSPMASRLRG RREPPVADST TSQAFPLRAG GNGQLQYWPF SSSDLYNWKN NNPSFSEDPG Kltaliesvl ithqptwddc qqllgtlltg eekqrvllea rkAVRGDDGR PTQLPNEVDA AFPLERPDWD YTTQAGRnhl vhyrqlllag lQNAGRSPTN LAKVKGITQG PNESPsafle rlkeayrRYT PYDPEDPGQE TNVsmsfiwq sapdigrkle rledlknktl gdlvreaeki FNKRETPEer eerirretee keerrrtede qkekerdrrr hremskllat vvsgQKQDRQ GGERRRSQLD RDQCAYCKEK GHWAKDCPKK PRGPRGPRPQ TSLLTLDDQG GQGQEPPPEP RITLKVGGQP VTflvdTGAQ HSVLTQNPGP LSDKSAWVQG ATGGKRYRWT TDRKVHLATG KVTHSFLHVP DCPYPLLGrd lltklkaqih FEGSGAQVMG PMGQPLQVLT LNIEDEHRLH ETSKEPDVSL GSTWLSDFPQ AWAETGGMGL AVRQAPLIIP LKATSTPVSI KQYPMSQEAR LGIkphiqrl lDQGILVPCQ SPWNTPLLPV KKPGTNDYRP VQDLREVNKR VEDIHPTVPN PYNLLSGLPP SHQWYTVldl kdAFFCLRLH PTSQPLFAFE WRDPEMGISG QLTWTRLPQG FKNSPTLFde alhrdladfr iqhpdlillq yvddlllaat seldcqqgtr allqtlgnlg yrasakkaqi cqkqvkylgy llkegqrwlt earKETVMGQ PTPKTPRqlr eflGTAGFCR LWIPGFAEMA APLYPLTKTG TLFNWGPDqq kayqeikqal lTAPALGLPD LTKPFelfvd EKQGYAKGVL TQKLGPWRRP VAYLSKKLDP VAAGWPPclr mvaaiavltk DAGKLTMGQP LVIlaphave aLVKQPPDRW LSNArmthyq alllDTDRVQ FGPVVALNPA TLLPLPEEGL QHncldilaE AHGTRPDLTD QPLPDADHTW YTDGSSLLqe gqrkagaavt teteviwaKA LPAGTSaqra elialtqalk maegKKLNVY TDsryafata hihgeiYRRR GLLTSEGKEI KNkdeilall kalfLPKRLS IIHCPGHQKG HSAEArgnrm adqaarkaai TETPDTSTLL IENSSPYTSE HFHytvtdik dltklgaiyd ktkkyWVYQG KPVMPDQFtf elldflhqlt hlsfskmkal lERSHSPYYM LNRDrtlkni tetckacaqv nasksaVKQG TRVRGHRPGT HWEIDFTEIK PGLYGykyll vfidtfSGWI EAFPTKketa kvvtkkllee IFPRFGMPQV LGTDNGPAFv skvsqtvadl lgidWKLHCA YRPQSSGQVe rmnrtiketl tkltLATGSR DWvlllplal yrARNTPGPH GLTPYEILYG APPPLVNFPD PDMTRVTNSP Slqahlqaly lvqhevwrpl aaayqeQLDR PVVPHPYRVG DTVWVRRHQT KNLEPRWKGP YTVLLTTPTA LKVdgiaawi haahVKAADP GGGPSSRLtw rvqrsQNPLK IRLTREAP
>P03355_HOTLOOPS
1-19, 24-34, 41-54, 68-77, 181-193, 206-220, 292-316, 354-366, 415-530, 575-602, 608-623, 672-682, 752-770, 942-959, 1037-1048, 1320-1339, 1429-1459, 1540-1551, 1561-1571, 1646-1681, 1707-1738
MGQTVTTPLS LTLGHWKDVe riaHNQSVDV KKRRwvtfcs AEWPTFNVGW PRDGtfnrdl itqvkikVFS PGPHGHPdqv pyivtweala fdpppwvkpf vhpkpppplp psapslplep prstpprssl ypaltpslga kpkpqvlsds ggplidllte dpppyrdprp ppsdrdgngg EATPAGEAPD PSPmasrlrg rreppVADST TSQAFPLRAG gngqlqywpf sssdlynwkn nnpsfsedpg kltaliesvl ithqptwddc qqllgtlltg eekqrvllea rKAVRGDDGR PTQLPNEVDA AFPLERpdwd yttqagrnhl vhyrqlllag lqnagrsptn lakVKGITQG PNESPSafle rlkeayrryt pydpedpgqe tnvsmsfiwq sapdigrkle rledLKNKTL GDLVREAEKI FNKRETPEER EERIRRETEE KEERRRTEDE QKEKERDRRR HREMSKLLAT VVSGQKQDRQ GGERRRSQLD RDQCAYCKEK GHWAKDCPKK PRGPRGPRPQ tslltlddqg gqgqepppep ritlkvggqp vtflvdtgaq hsvlTQNPGP LSDKSAWVQG ATGGKRYRWT TDrkvhlATG KVTHSFLHVP DCPypllgrd lltklkaqih fegsgaqvmg pmgqplqvlt lniedehrlh eTSKEPDVSL GStwlsdfpq awaetggmgl avrqapliip lkatstpvsi kqypmsqear lgikphiqrl ldqgilvpcq sPWNTPLLPV KKPGTNDYRP vqdlrevnkr vedihptvpn pynllsglpp shqwytvldl kdaffclrlh ptsqplfafe wrdpemgisg qltwtrlpqg fknsptlfde alhrdladfr iqhpdlillq yvddlllaat seldcqqgtr allqtlgnlg yrasakkaqi cqkqvkylgy llkegqrwlt eARKETVMGQ PTPKTPRQLr eflgtagfcr lwipgfaema aplypltktg tlfnwgpdqq kayqeikqal ltapalglpd ltkpfelfvd ekqgyaKGVL TQKLGPWRrp vaylskkldp vaagwppclr mvaaiavltk dagkltmgqp lvilaphave alvkqppdrw lsnarmthyq allldtdrvq fgpvvalnpa tllplpeegl qhncldilae ahgtrpdltd qplpdadhtw ytdgssllqe gqrkagaavt teteviwaka lpagtsaqra elialtqalk maegkklnvy tdsryafata hihgeiyrrr glltsegkei knkdeilall kalflpkrls iihcpghqkg hsaeargnrm adqaarkaaI TETPDTSTLL IENSSPYTSe hfhytvtdik dltklgaiyd ktkkywvyqg kpvmpdqftf elldflhqlt hlsfskmkal lershspyym lnrdrtlkni tetckacaQV NASKSAVKQG TRVRGHRPGT HWEIDFTEIk pglygykyll vfidtfsgwi eafptkketa kvvtkkllee ifprfgmpqv lgtdngpafv skvsqtvadl lgidwklhcA YRPQSSGQVE Rmnrtiketl TKLTLATGSR Dwvlllplal yrarntpgph gltpyeilyg appplvnfpd pdmtrvtnsp slqahlqaly lvqhevwrpl aaayqEQLDR PVVPHPYRVG DTVWVRRHQT KNLEPRWKGP Ytvllttpta lkvdgiaawi haahvkAADP GGGPSSRLTW RVQRSQNPLK IRLTREAP
>P03355_REM465
114-128, 168-211, 434-471, 481-500, 520-528, 538-547, 670-679, 1188-1201, 1297-1320, 1428-1445
mgqtvttpls ltlghwkdve riahnqsvdv kkrrwvtfcs aewptfnvgw prdgtfnrdl itqvkikvfs pgphghpdqv pyivtweala fdpppwvkpf vhpkpppplp psaPSLPLEP PRSTPPRSsl ypaltpslga kpkpqvlsds ggplidllte dpppyrdPRP PPSDRDGNGG EATPAGEAPD PSPMASRLRG RREPPVADST Tsqafplrag gngqlqywpf sssdlynwkn nnpsfsedpg kltaliesvl ithqptwddc qqllgtlltg eekqrvllea rkavrgddgr ptqlpnevda afplerpdwd yttqagrnhl vhyrqlllag lqnagrsptn lakvkgitqg pnespsafle rlkeayrryt pydpedpgqe tnvsmsfiwq sapdigrkle rledlknktl gdlvreaeki fnkRETPEER EERIRRETEE KEERRRTEDE QKEKERDRRR Hremskllat VVSGQKQDRQ GGERRRSQLD rdqcayckek ghwakdcpkK PRGPRGPRpq tslltldDQG GQGQEPPpep ritlkvggqp vtflvdtgaq hsvltqnpgp lsdksawvqg atggkryrwt tdrkvhlatg kvthsflhvp dcpypllgrd lltklkaqih fegsgaqvmg pmgqplqvlt lniedehrlH ETSKEPDVSl gstwlsdfpq awaetggmgl avrqapliip lkatstpvsi kqypmsqear lgikphiqrl ldqgilvpcq spwntpllpv kkpgtndyrp vqdlrevnkr vedihptvpn pynllsglpp shqwytvldl kdaffclrlh ptsqplfafe wrdpemgisg qltwtrlpqg fknsptlfde alhrdladfr iqhpdlillq yvddlllaat seldcqqgtr allqtlgnlg yrasakkaqi cqkqvkylgy llkegqrwlt earketvmgq ptpktprqlr eflgtagfcr lwipgfaema aplypltktg tlfnwgpdqq kayqeikqal ltapalglpd ltkpfelfvd ekqgyakgvl tqklgpwrrp vaylskkldp vaagwppclr mvaaiavltk dagkltmgqp lvilaphave alvkqppdrw lsnarmthyq allldtdrvq fgpvvalnpa tllplpeegl qhncldilae ahgtrpdltd qplpdadhtw ytdgsslLQE GQRKAGAAVT Teteviwaka lpagtsaqra elialtqalk maegkklnvy tdsryafata hihgeiyrrr glltsegkei knkdeilall kalflpkrls iihcpgHQKG HSAEARGNRM ADQAARKAAI tetpdtstll iensspytse hfhytvtdik dltklgaiyd ktkkywvyqg kpvmpdqftf elldflhqlt hlsfskmkal lershspyym lnrdrtlkni tetckacAQV NASKSAVKQG TRVRGhrpgt hweidfteik pglygykyll vfidtfsgwi eafptkketa kvvtkkllee ifprfgmpqv lgtdngpafv skvsqtvadl lgidwklhca yrpqssgqve rmnrtiketl tkltlatgsr dwvlllplal yrarntpgph gltpyeilyg appplvnfpd pdmtrvtnsp slqahlqaly lvqhevwrpl aaayqeqldr pvvphpyrvg dtvwvrrhqt knleprwkgp ytvllttpta lkvdgiaawi haahvkaadp gggpssrltw rvqrsqnplk irltreap
| JOB-ID | P03355_042936ZincMH8AAQEAAB1mKCIAAABQ |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P03355 |
| Description | sp|P03355|POL_MLVMS Gag-Pol polyprotein OS=Moloney murine leukemia virus (isolate Shinnick) OX=928306 GN=gag-pol PE=1 SV=5 |
| Title/ID | none |
| Sequence length | 1738 |
| Download predictions | smoothed scores raw scores |