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>P04050_LOOPS
1-25, 33-91, 145-202, 214-261, 277-287, 304-322, 331-385, 393-454, 464-495, 506-525, 552-575, 580-610, 619-629, 660-675, 703-712, 765-822, 853-860, 866-876, 882-891, 900-924, 948-958, 970-983, 1070-1098, 1108-1127, 1151-1167, 1181-1188, 1201-1210, 1228-1236, 1241-1252, 1272-1279, 1287-1329, 1357-1364, 1376-1401, 1414-1444, 1449-1733
MVGQQYSSAP LRTVKEVQFG LFSPEevrai svAKIRFPET MDETQTRAKI GGLNDPRLGS IDRNLKCQTC QEGMNECPGH FGHIDLAKPV Fhvgfiakik kvcecvcmhc gkllldehne lmrqalaikd skkrfaaiwt lcktKMVCET DVPSEDDPTQ LVSRGGCGNT QPTIRKDGLK LVGSWKKDRA TGDADEPELR VLsteeilni fkhISVKDFT SLGFNEVFSR PEWMILTCLP VPPPPVRPSI SFNESQRGED Dltfkladil kanislETLE HNGAPHHaie eaesllqfhv atyMDNDIAG QPQALQKSGR PVksirarlk GKEGRIRGNL MGKRVDFSAR TVISGDPNLE LDQVGVPKSI AKTLTYPEVV TPYNIdrltq lvRNGPNEHP GAKYVIRDSG DRIDLRYSKR AGDIQLQYGW KVERHIMDND PVLFNRQPSL HKMSmmahrv kviPYSTFRL NLSVTSPYNA DFDGDEMNLH VPQSEetrae lsqlcAVPLQ IVSPQSNKPC MGIVQdtlcg irkltlrdtf ieldqvlnml yWVPDWDGVI PTPAIIKPKP LWSGKqilsV AIPNGIHLQR FDEGTTLLSP KDNGMLIIDG qiifgvveKK TVGSSNGGLi hvvtrekgpq vcaklfgniq kvvnfwllhN GFSTGIGDTI ADGPTmreit etiaeakkkv ldvtkeaqan llTAKHGMTL REsfednvvr flneardkag rlaevnlkdl nnvkqmvmag skgsfiniaq msacVGQQSV EGKRIAFGFV DRTLPHFSKD DYSPESKGFV ENSYLRGLTP QEFFFHAMGG REglidtavk taetgyiqrr lvkaledimv hyDNTTRNSL gnviqFIYGE DGMDAAhiek qSLDTIGGSD AafekryrvD LLNTDHTLDP SLLESGSEIL GDLKlqvlld eeykqlvkdr kflrevfVDG EANWPLPVni rriiqnaqqT FHIDHTKPSD LTIkdivlgv kdlqenllvl rgkneiiqna qrdavtlfcc llrsrlatrr vlqeyrltkq afdwvlsnie aqflrsvvhp gemvgvlaaQ SIGEPATQMT LNTFHFAGVA SKKVTSGVpr lkeilnvAKN MKTPSLTVYL EPGHAADqeq aklirsaieh ttlksvtias EIYYDPDPRS TVIPEDEeii qlhfslldee AEQSFDQQsp wllrleldra AMNDKDLTMG qvgerikqtf kndlfviWSE DNDEKLiirc RVVRPKSLDA ETeaeedhml kkientmlen iTLRGVENIe rvvmmkYDRK VPSPTGEYVK EPEWVLETDG VNLSEVMTVP GIDPTRIYTn sfidimevlg ieagraalyk evynviASDG SYVNyrhmal lvdvmTTQGG LTSVTRHGFN RSNTGALMRC Sfeetveilf eagASAELDD CRGVSENVIL GQMAPIGTGA FDVMideeSL VKYMPEQKIT EIEDGQDGGV TPYSNESGLV NADLDVKDEL MFSPLVDSGS NDAMAGGFTA YGGADYGEAT SPFGAYGEAP TSPGFGVSSP GFSPTSPTYS PTSPAYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPA YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPNYSPTS PSYSPTSPGY SPGSPAYSPK QDEQKHNENE NSR
>P04050_HOTLOOPS
1-27, 32-61, 146-202, 213-221, 312-366, 373-383, 392-411, 418-435, 512-520, 701-712, 731-742, 785-796, 853-861, 948-958, 970-980, 1106-1113, 1227-1305, 1383-1396, 1459-1470, 1716-1733
MVGQQYSSAP LRTVKEVQFG LFSPEEVrai sVAKIRFPET MDETQTRAKI GGLNDPRLGS Idrnlkcqtc qegmnecpgh fghidlakpv fhvgfiakik kvcecvcmhc gkllldehne lmrqalaikd skkrfaaiwt lcktkMVCET DVPSEDDPTQ LVSRGGCGNT QPTIRKDGLK LVGSWKKDRA TGDADEPELR VLsteeilni fkHISVKDFT Slgfnevfsr pewmiltclp vppppvrpsi sfnesqrged dltfkladil kanisletle hngaphhaie eaesllqfhv atymdndiag qPQALQKSGR PVKSIRARLK GKEGRIRGNL MGKRVDFSAR TVISGDPNLE LDQVGVpksi akTLTYPEVV TPYnidrltq lVRNGPNEHP GAKYVIRDSG DridlrySKR AGDIQLQYGW KVERHimdnd pvlfnrqpsl hkmsmmahrv kvipystfrl nlsvtspyna dfdgdemnlh vpqseetrae lsqlcavplq iVSPQSNKPC mgivqdtlcg irkltlrdtf ieldqvlnml ywvpdwdgvi ptpaiikpkp lwsgkqilsv aipngihlqr fdegttllsp kdngmliidg qiifgvvekk tvgssnggli hvvtrekgpq vcaklfgniq kvvnfwllhn gfstgigdti adgptmreit etiaeakkkv ldvtkeaqan LLTAKHGMTL REsfednvvr flneardkag RLAEVNLKDL NNvkqmvmag skgsfiniaq msacvgqqsv egkriafgfv drtlPHFSKD DYSPESkgfv ensylrgltp qefffhamgg reglidtavk taetgyiqrr lvkaledimv hyDNTTRNSL Gnviqfiyge dgmdaahiek qsldtiggsd aafekryrvd llntdhtldp sllesgseil gdlklqvlld eeykqlvkdr kflrevfVDG EANWPLPVni rriiqnaqqT FHIDHTKPSD ltikdivlgv kdlqenllvl rgkneiiqna qrdavtlfcc llrsrlatrr vlqeyrltkq afdwvlsnie aqflrsvvhp gemvgvlaaq sigepatqmt lntfhfagva skkvtsgvpr lkeilNVAKN MKTpsltvyl epghaadqeq aklirsaieh ttlksvtias eiyydpdprs tvipedeeii qlhfslldee aeqsfdqqsp wllrleldra amndkdltmg qvgerikqtf kndlfvIWSE DNDEKLIIRC RVVRPKSLDA ETEAEEDHML KKIENTMLEN ITLRGVENIE RVVMMKYDRK VPSPTGEYVK EPEWVletdg vnlsevmtvp gidptriytn sfidimevlg ieagraalyk evynviasdg syvnyrhmal lvdvmttqgg ltSVTRHGFN RSNTGAlmrc sfeetveilf eagasaeldd crgvsenvil gqmapigtga fdvmideesl vkympeqkIT EIEDGQDGGV tpysnesglv nadldvkdel mfsplvdsgs ndamaggfta yggadygeat spfgaygeap tspgfgvssp gfsptsptys ptspayspts psysptspsy sptspsyspt spsysptsps ysptspsysp tspsysptsp sysptspsys ptspsyspts psysptspsy sptspsyspt spsysptspa ysptspsysp tspsysptsp sysptspsys ptspnyspts psysptspgy spgspAYSPK QDEQKHNENE NSR
>P04050_REM465
187-196, 312-323, 1540-1733
mvgqqyssap lrtvkevqfg lfspeevrai svakirfpet mdetqtraki gglndprlgs idrnlkcqtc qegmnecpgh fghidlakpv fhvgfiakik kvcecvcmhc gkllldehne lmrqalaikd skkrfaaiwt lcktkmvcet dvpseddptq lvsrggcgnt qptirkdglk lvgswkKDRA TGDADEpelr vlsteeilni fkhisvkdft slgfnevfsr pewmiltclp vppppvrpsi sfnesqrged dltfkladil kanisletle hngaphhaie eaesllqfhv atymdndiag qPQALQKSGR PVKsirarlk gkegrirgnl mgkrvdfsar tvisgdpnle ldqvgvpksi aktltypevv tpynidrltq lvrngpnehp gakyvirdsg dridlryskr agdiqlqygw kverhimdnd pvlfnrqpsl hkmsmmahrv kvipystfrl nlsvtspyna dfdgdemnlh vpqseetrae lsqlcavplq ivspqsnkpc mgivqdtlcg irkltlrdtf ieldqvlnml ywvpdwdgvi ptpaiikpkp lwsgkqilsv aipngihlqr fdegttllsp kdngmliidg qiifgvvekk tvgssnggli hvvtrekgpq vcaklfgniq kvvnfwllhn gfstgigdti adgptmreit etiaeakkkv ldvtkeaqan lltakhgmtl resfednvvr flneardkag rlaevnlkdl nnvkqmvmag skgsfiniaq msacvgqqsv egkriafgfv drtlphfskd dyspeskgfv ensylrgltp qefffhamgg reglidtavk taetgyiqrr lvkaledimv hydnttrnsl gnviqfiyge dgmdaahiek qsldtiggsd aafekryrvd llntdhtldp sllesgseil gdlklqvlld eeykqlvkdr kflrevfvdg eanwplpvni rriiqnaqqt fhidhtkpsd ltikdivlgv kdlqenllvl rgkneiiqna qrdavtlfcc llrsrlatrr vlqeyrltkq afdwvlsnie aqflrsvvhp gemvgvlaaq sigepatqmt lntfhfagva skkvtsgvpr lkeilnvakn mktpsltvyl epghaadqeq aklirsaieh ttlksvtias eiyydpdprs tvipedeeii qlhfslldee aeqsfdqqsp wllrleldra amndkdltmg qvgerikqtf kndlfviwse dndekliirc rvvrpkslda eteaeedhml kkientmlen itlrgvenie rvvmmkydrk vpsptgeyvk epewvletdg vnlsevmtvp gidptriytn sfidimevlg ieagraalyk evynviasdg syvnyrhmal lvdvmttqgg ltsvtrhgfn rsntgalmrc sfeetveilf eagasaeldd crgvsenvil gqmapigtga fdvmideesl vkympeqkit eiedgqdggv tpysnesglv nadldvkdel mfsplvdsgs ndamaggfta yggadygeat spfgaygeap tspgfgvssP GFSPTSPTYS PTSPAYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPS YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPSYSPTS PSYSPTSPSY SPTSPSYSPT SPSYSPTSPA YSPTSPSYSP TSPSYSPTSP SYSPTSPSYS PTSPNYSPTS PSYSPTSPGY SPGSPAYSPK QDEQKHNENE NSR
| JOB-ID | P04050_073649ZioIEX8AAQEAAB1l2RQAAAAX |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P04050 |
| Description | sp|P04050|RPB1_YEAST DNA-directed RNA polymerase II subunit RPB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPO21 PE=1 SV=2 |
| Title/ID | none |
| Sequence length | 1733 |
| Download predictions | smoothed scores raw scores |