>P04584_LOOPS
1-29, 63-76, 111-152, 165-192, 211-241, 251-263, 277-296, 306-315, 337-344, 352-359, 372-379, 390-470, 483-574, 588-597, 609-639, 656-681, 693-771, 800-808, 822-866, 880-888, 995-1004, 1019-1034, 1039-1075, 1098-1107, 1113-1125, 1147-1158, 1194-1201, 1253-1266, 1277-1293, 1307-1319, 1355-1370, 1403-1416, 1426-1433, 1441-1464
MGARNSVLRG KKADELERIR LRPGGKKKYr lkhivwaank ldrfglaesl leskegcqki ltVLDPMVPT GSENLKslfn tvcviwciha eekvkdtega kqivrrhlva ETGTAEKMPS TSRPTAPSSE KGGNYPVQHV GGNYTHIPLS PRtlnawvkl veekKFGAEV VPGFQALSEG CTPYDINQML NCvgdhqaam qiireiinee AAEWDVQHPI PGPLPAGQLR EPRGSDIAGT Tstveeqiqw MFRPQNPVPV GNIyrrwiqi glqkcvRMYN PTNILDIKQG PKEPFQsyvd rfyksLRAEQ TDPAVknwmt qtllvqnanp dcklvlKGLG MNPTleemlt aCQGVGGPGq karlmaealk eVIGPAPIPf aaaqqrkafK CWNCGKEGHS ARQCRAPRRQ GCWKCGKPGH IMTNCPDRQA GFLRTGPLGK EAPQLPRGPS SAGADTNSTP SGSSSGSTGE iyaarekter aeRETIQGSD RGLTAPRAGG DTIQGATNRG LAAPQFSLWK RPVVTAYIEG QPVEVLLDTG ADDSIVAGIE LGNNYSPKIV GGIGGFINTK EYKNveievl nkkvratIMT GDTPINIfgr niltalgmSL NLPVAKVEPI KIMLKPGKDG PKLRQWPLTk ekiealkeic ekmekEGQLE EAPPTNPYNT PTFAIKKKDK Nkwrmlidfr elNKVTQDFT EIQLGIPHPA GLAKKRRITV LDVGDAYFSI PLHEDFRPYT AFTLPSVNNA EPGKRYIYKV LPQGWKGSPA Ifqhtmrqvl epfrkankdv iiiqymddiL IASDRTDLeh drvvlqlkel lNGLGFSTPD EKFQKDPPYH WMGYELWPTK WKLQKIQLPQ KEIWTVndiq klvgvlnwaA QLYPGIKTkh lcrlirgkmt lteevqwtel aeaeleenri ilsqeqeghy yqeekeleat vqkdqenqwt ykihqeekil kvgkyakvkn thtngirlla qvvqkigkea lviwGRIPKF HLPVereiwe qwwdnywqVT WIPDWDFVST PPLVrlafNL VGDPIPGAET FYTDGSCNRQ SKEGKAGYVT DRGKDkvkkl eqttnqqael eafamalTDS GPKVNIIvds qyVMGISASQ PTESEskivn qiieemikke aiyvawVPAH KGIGGNQEvd hlvsqgirqv lflekiepaq eehekyhsnv kelSHKFGIP Nlvarqivns caqcqqkgea ihgqvnaelg twqmdcthle gkiiivavhv asGFIEAEVI PQESGRqtal fllklaSRWP ITHLHTDNGA NFTsqevkmv awwigiEQSF GVPYNPQSQg vveamnhhlk nqisrireqa ntietivlma ihcmNFKRRG GIGDMTPSER linmitteqe iqflqaknsk lkdfrvyfre grDQLWKGPG ELLWKGegav lvkvgTDIKI IPRrkakiir DYGGRQEMDS GSHLEGARED GEMA
>P04584_HOTLOOPS
1-32, 92-101, 110-130, 283-292, 398-410, 442-471, 476-499, 550-559, 586-595, 622-639, 655-681, 704-715, 744-752, 821-838, 953-962, 1050-1076, 1116-1126, 1404-1464
MGARNSVLRG KKADELERIR LRPGGKKKYR LKhivwaank ldrfglaesl leskegcqki ltvldpmvpt gsenlkslfn tvcviwciha eEKVKDTEGA KqivrrhlvA ETGTAEKMPS TSRPTAPSSE kggnypvqhv ggnythipls prtlnawvkl veekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiireiinee aaewdvqhpi pgplpagqlr eprgsdiagt tstveeqiqw mfrpqnpvpv gniyrrwiqi glqkcvrmyn ptNILDIKQG PKepfqsyvd rfykslraeq tdpavknwmt qtllvqnanp dcklvlkglg mnptleemlt acqgvggpgq karlmaealk evigpapipf aaaqqrkafk cwncgkeGHS ARQCRAPRRQ gcwkcgkpgh imtncpdrqa gflrtgplgk eAPQLPRGPS SAGADTNSTP SGSSSGSTGE IyaarEKTER AERETIQGSD RGLTAPRAGg dtiqgatnrg laapqfslwk rpvvtayieg qpvevlldtg addsivagiE LGNNYSPKIv ggiggfintk eyknveievl nkkvrATIMT GDTPInifgr niltalgmsl nlpvakvepi kIMLKPGKDG PKLRQWPLTk ekiealkeic ekmeKEGQLE EAPPTNPYNT PTFAIKKKDK Nkwrmlidfr elnkvtqdft eiqLGIPHPA GLAKKrritv ldvgdayfsi plhedfrpyt aftLPSVNNA EPgkryiykv lpqgwkgspa ifqhtmrqvl epfrkankdv iiiqymddil iasdrtdleh drvvlqlkel LNGLGFSTPD EKFQKDPPyh wmgyelwptk wklqkiqlpq keiwtvndiq klvgvlnwaa qlypgiktkh lcrlirgkmt lteevqwtel aeaeleenri ilsqeqeghy yqeekeleat vqkdqenqwt ykIHQEEKIL KVgkyakvkn thtngirlla qvvqkigkea lviwgripkf hlpvereiwe qwwdnywqvt wipdwdfvst pplvrlafnl vgdpipgaeT FYTDGSCNRQ SKEGKAGYVT DRGKDKvkkl eqttnqqael eafamaltds gpkvniivds qyvmgISASQ PTESESkivn qiieemikke aiyvawvpah kgiggnqevd hlvsqgirqv lflekiepaq eehekyhsnv kelshkfgip nlvarqivns caqcqqkgea ihgqvnaelg twqmdcthle gkiiivavhv asgfieaevi pqesgrqtal fllklasrwp ithlhtdnga nftsqevkmv awwigieqsf gvpynpqsqg vveamnhhlk nqisrireqa ntietivlma ihcmnfkrrg gigdmtpser linmitteqe iqflqaknsk lkdfrvyfre grdQLWKGPG ELLWKGEGAV LVKVGTDIKI IPRRKAKIIR DYGGRQEMDS GSHLEGARED GEMA
>P04584_REM465
1-10, 114-131, 395-410, 443-470, 475-487, 654-664, 1181-1188, 1449-1464
MGARNSVLRG kkadelerir lrpggkkkyr lkhivwaank ldrfglaesl leskegcqki ltvldpmvpt gsenlkslfn tvcviwciha eekvkdtega kqivrrhlva etgTAEKMPS TSRPTAPSSE Kggnypvqhv ggnythipls prtlnawvkl veekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiireiinee aaewdvqhpi pgplpagqlr eprgsdiagt tstveeqiqw mfrpqnpvpv gniyrrwiqi glqkcvrmyn ptnildikqg pkepfqsyvd rfykslraeq tdpavknwmt qtllvqnanp dcklvlkglg mnptleemlt acqgvggpgq karlmaealk evigpapipf aaaqqrkafk cwncGKEGHS ARQCRAPRRQ gcwkcgkpgh imtncpdrqa gflrtgplgk eaPQLPRGPS SAGADTNSTP SGSSSGSTGE iyaaREKTER AERETIQgsd rgltapragg dtiqgatnrg laapqfslwk rpvvtayieg qpvevlldtg addsivagie lgnnyspkiv ggiggfintk eyknveievl nkkvratimt gdtpinifgr niltalgmsl nlpvakvepi kimlkpgkdg pklrqwpltk ekiealkeic ekmEKEGQLE EAPPtnpynt ptfaikkkdk nkwrmlidfr elnkvtqdft eiqlgiphpa glakkrritv ldvgdayfsi plhedfrpyt aftlpsvnna epgkryiykv lpqgwkgspa ifqhtmrqvl epfrkankdv iiiqymddil iasdrtdleh drvvlqlkel lnglgfstpd ekfqkdppyh wmgyelwptk wklqkiqlpq keiwtvndiq klvgvlnwaa qlypgiktkh lcrlirgkmt lteevqwtel aeaeleenri ilsqeqeghy yqeekeleat vqkdqenqwt ykihqeekil kvgkyakvkn thtngirlla qvvqkigkea lviwgripkf hlpvereiwe qwwdnywqvt wipdwdfvst pplvrlafnl vgdpipgaet fytdgscnrq skegkagyvt drgkdkvkkl eqttnqqael eafamaltds gpkvniivds qyvmgisasq pteseskivn qiieemikke aiyvawvpah kgiggnqevd hlvsqgirqv lflekiepaq EEHEKYHSnv kelshkfgip nlvarqivns caqcqqkgea ihgqvnaelg twqmdcthle gkiiivavhv asgfieaevi pqesgrqtal fllklasrwp ithlhtdnga nftsqevkmv awwigieqsf gvpynpqsqg vveamnhhlk nqisrireqa ntietivlma ihcmnfkrrg gigdmtpser linmitteqe iqflqaknsk lkdfrvyfre grdqlwkgpg ellwkgegav lvkvgtdiki iprrkakiir dyggrqemDS GSHLEGARED GEMA
JOB-ID | P04584_102253ZgVE-X8AAQEAAG@7kxMAAABJ |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P04584 |
Description | sp|P04584|POL_HV2RO Gag-Pol polyprotein OS=Human immunodeficiency virus type 2 subtype A (isolate ROD) OX=11720 GN=gag-pol PE=1 SV=3 |
Title/ID | none |
Sequence length | 1464 |
Download predictions | smoothed scores raw scores |