>P04585_LOOPS
1-30, 43-54, 64-72, 120-149, 162-183, 210-239, 249-260, 275-294, 349-358, 381-424, 446-501, 512-539, 557-573, 580-614, 630-660, 676-746, 755-765, 773-783, 800-841, 852-861, 874-884, 896-909, 932-950, 969-983, 996-1009, 1017-1055, 1075-1086, 1093-1101, 1123-1133, 1169-1178, 1190-1215, 1229-1242, 1252-1269, 1281-1296, 1332-1343, 1374-1409, 1419-1435
MGARASVLSG GELDRWEKIR LRPGGKKKYK lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaaA DTGHSNQVSQ NYPIVQNIQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaA EWDRVHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamsqv tnsatimmqr GNFRNQRKIV KCFNCGKEGH TARNCRAPRK KGCWKCGKEG HQMKdcterq anflredlaf lqgkaREFSS EQTRANSPTR RELQVWGRDN NSPSEAGADR QGTVSFNFPQ VTLWQRPLVT Ikiggqlkea lLDTGADDTV LEEMSLPGRW KPKMIGGIGg fikvrqydqi lieicgHKAI GTVLVGPTPV NIIgrnlltQ IGCTLNFPIS PIETVPVKLK PGMDGPKVKQ WPLTeekika lveictemeK EGKISKIGPE NPYNTPVFAI KKKDSTKWRK lvdfrelnkr tqdfwEVQLG IPHPAGLKKK KSVTVLDVGD AYFSVPLDED FRKYTAFTIP SINNETPGIR YQYNVLPQGW KGSPAIfqss mtkiLEPFRK QNPDIviyqy mdDLYVGSDL EIGqhrtkie elrqhllrwG LTTPDKKHQK EPPFLWMGYE LHPDKWTVQP IVLPEKDSWT Vndiqklvgk lNWASQIYPG Ikvrqlckll rgtKALTEVI PLTEeaelel aenreILKEP VHGVYYDPSk dliaeiqkqg qgqwtyqiyq ePFKNLKTGK YARMRGAHTN dvkqlteavq kittesivIW GKTPKFKLPI QKEtwetwwt eywqaTWIPE WEFVNTPPLv klwyqlEKEP IVGAETFYVD GAANRETKLG KAGYVTNRGR QKVVTltdtt nqktelqaiy lalqDSGLEV NIVTDSqyal giIQAQPDQS Eselvnqiie qlikkekvyl awVPAHKGIG GNEqvdklvs agirkvlfld gidkaqdehe kyhsnwraMA SDFNLPPVva keivascdkC QLKGEAMHGQ VDCSPGIWQL DCTHLegkvi lvavhvasGY IEAEVIPAET GQetayfllk lAGRWPVKTI HTDNGSNFTg atvraacwwa GIKQEFGIPY NPQSQGvves mnkelkkiig qvrdqaehlk tavqmavfih nFKRKGGIGG YSAgerivdi iatdiqtkel qkqitkiqnf rvyYRDSRNP LWKGPAKLLW KGEGAVVIQD NSDIKVVPRr kakiirdyGK QMAGDDCVAS RQDED
>P04585_HOTLOOPS
1-32, 280-292, 394-411, 446-483, 522-535, 594-615, 630-659, 669-693, 718-728, 800-811, 851-859, 874-886, 965-981, 1034-1063, 1260-1269, 1391-1410, 1416-1435
MGARASVLSG GELDRWEKIR LRPGGKKKYK LKhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaaa dtghsnqvsq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrkiv kcfNCGKEGH TARNCRAPRK Kgcwkcgkeg hqmkdcterq anflredlaf lqgkaREFSS EQTRANSPTR RELQVWGRDN NSPSEAGADR QGTvsfnfpq vtlwqrplvt ikiggqlkea lldtgaddtv lEEMSLPGRW KPKMIggigg fikvrqydqi lieicghkai gtvlvgptpv niigrnlltq igctlnfpis pieTVPVKLK PGMDGPKVKQ WPLTEekika lveictemeK EGKISKIGPE NPYNTPVFAI KKKDSTKWRk lvdfrelnKR TQDFWEVQLG IPHPAGLKKK KSVtvldvgd ayfsvplded frkytafTIP SINNETPGir yqynvlpqgw kgspaifqss mtkilepfrk qnpdiviyqy mddlyvgsdl eigqhrtkie elrqhllrwG LTTPDKKHQK Eppflwmgye lhpdkwtvqp ivlpekdswt vndiqklvgk LNWASQIYPg ikvrqlckll rgtKALTEVI PLTEEAelel aenreilkep vhgvyydpsk dliaeiqkqg qgqwtyqiyq epfknlktgk yarmrgahtn dvkqlteavq kittESIVIW GKTPKFKLPI Qketwetwwt eywqatwipe wefvntpplv klwyqlekep ivgaetfyvd gaaNRETKLG KAGYVTNRGR QKVVTLTDTT NQKtelqaiy lalqdsglev nivtdsqyal giiqaqpdqs eselvnqiie qlikkekvyl awvpahkgig gneqvdklvs agirkvlfld gidkaqdehe kyhsnwrama sdfnlppvva keivascdkc qlkgeamhgq vdcspgiwql dcthlegkvi lvavhvasgy ieaevipaet gqetayfllk lagrwpvktI HTDNGSNFTg atvraacwwa gikqefgipy npqsqgvves mnkelkkiig qvrdqaehlk tavqmavfih nfkrkggigg ysagerivdi iatdiqtkel qkqitkiqnf rvyyrdsrnp lwkgpakllw KGEGAVVIQD NSDIKVVPRR kakiiRDYGK QMAGDDCVAS RQDED
>P04585_REM465
1-9, 106-126, 447-479, 1358-1366, 1402-1435
MGARASVLSg geldrwekir lrpggkkkyk lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieEEQNK SKKKAQQAAA DTGHSNqvsq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrkiv kcfncgkegh tarncraprk kgcwkcgkeg hqmkdcterq anflredlaf lqgkarEFSS EQTRANSPTR RELQVWGRDN NSPSEAGADr qgtvsfnfpq vtlwqrplvt ikiggqlkea lldtgaddtv leemslpgrw kpkmiggigg fikvrqydqi lieicghkai gtvlvgptpv niigrnlltq igctlnfpis pietvpvklk pgmdgpkvkq wplteekika lveictemek egkiskigpe npyntpvfai kkkdstkwrk lvdfrelnkr tqdfwevqlg iphpaglkkk ksvtvldvgd ayfsvplded frkytaftip sinnetpgir yqynvlpqgw kgspaifqss mtkilepfrk qnpdiviyqy mddlyvgsdl eigqhrtkie elrqhllrwg lttpdkkhqk eppflwmgye lhpdkwtvqp ivlpekdswt vndiqklvgk lnwasqiypg ikvrqlckll rgtkaltevi plteeaelel aenreilkep vhgvyydpsk dliaeiqkqg qgqwtyqiyq epfknlktgk yarmrgahtn dvkqlteavq kittesiviw gktpkfklpi qketwetwwt eywqatwipe wefvntpplv klwyqlekep ivgaetfyvd gaanretklg kagyvtnrgr qkvvtltdtt nqktelqaiy lalqdsglev nivtdsqyal giiqaqpdqs eselvnqiie qlikkekvyl awvpahkgig gneqvdklvs agirkvlfld gidkaqdehe kyhsnwrama sdfnlppvva keivascdkc qlkgeamhgq vdcspgiwql dcthlegkvi lvavhvasgy ieaevipaet gqetayfllk lagrwpvkti htdngsnftg atvraacwwa gikqefgipy npqsqgvves mnkelkkiig qvrdqaehlk tavqmavfih nfkrkggigg ysagerivdi iatdiqtKEL QKQITKiqnf rvyyrdsrnp lwkgpakllw kgegavviqd nSDIKVVPRR KAKIIRDYGK QMAGDDCVAS RQDED
JOB-ID | P04585_024450ZisVIn8AAQEAAB1mLi4AAABH |
---|---|
Frames used | smooth=8 peak=8 join=4 |
Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
Name | P04585 |
Description | sp|P04585|POL_HV1H2 Gag-Pol polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) OX=11706 GN=gag-pol PE=1 SV=4 |
Title/ID | none |
Sequence length | 1435 |
Download predictions | smoothed scores raw scores |