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>P04590_LOOPS
1-29, 63-76, 111-152, 165-192, 211-241, 251-263, 277-296, 306-315, 337-344, 352-359, 372-379, 390-463, 478-487, 495-522
MGARNSVLRG KKADELERIR LRPGGKKKYr lkhivwaank ldrfglaesl leskegcqki ltVLDPMVPT GSENLKslfn tvcviwciha eekvkdtega kqivrrhlva ETGTAEKMPS TSRPTAPSSE KGGNYPVQHV GGNYTHIPLS PRtlnawvkl veekKFGAEV VPGFQALSEG CTPYDINQML NCvgdhqaam qiireiinee AAEWDVQHPI PGPLPAGQLR EPRGSDIAGT Tstveeqiqw MFRPQNPVPV GNIyrrwiqi glqkcvRMYN PTNILDIKQG PKEPFQsyvd rfyksLRAEQ TDPAVknwmt qtllvqnanp dcklvlKGLG MNPTleemlt aCQGVGGPGq karlmaealk eVIGPAPIPf aaaqqrkafK CWNCGKEGHS ARQCRAPRRQ GCWKCGKPGH IMTNCPDRQA GFLGLGPWGK KPRNFPVAQV PQGLTPTAPP VDPavdllek ymqqgkrQRE QRERPYKevt edllHLEQGE TPYREPPTED LLHLNSLFGK DQ
>P04590_HOTLOOPS
1-32, 92-101, 110-130, 283-292, 398-410, 475-522
MGARNSVLRG KKADELERIR LRPGGKKKYR LKhivwaank ldrfglaesl leskegcqki ltvldpmvpt gsenlkslfn tvcviwciha eEKVKDTEGA KqivrrhlvA ETGTAEKMPS TSRPTAPSSE kggnypvqhv ggnythipls prtlnawvkl veekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiireiinee aaewdvqhpi pgplpagqlr eprgsdiagt tstveeqiqw mfrpqnpvpv gniyrrwiqi glqkcvrmyn ptNILDIKQG PKepfqsyvd rfykslraeq tdpavknwmt qtllvqnanp dcklvlkglg mnptleemlt acqgvggpgq karlmaealk evigpapipf aaaqqrkafk cwncgkeGHS ARQCRAPRRQ gcwkcgkpgh imtncpdrqa gflglgpwgk kprnfpvaqv pqgltptapp vdpavdllek ymqqGKRQRE QRERPYKEVT EDLLHLEQGE TPYREPPTED LLHLNSLFGK DQ
>P04590_REM465
1-10, 114-131, 395-410, 472-487
MGARNSVLRG kkadelerir lrpggkkkyr lkhivwaank ldrfglaesl leskegcqki ltvldpmvpt gsenlkslfn tvcviwciha eekvkdtega kqivrrhlva etgTAEKMPS TSRPTAPSSE Kggnypvqhv ggnythipls prtlnawvkl veekkfgaev vpgfqalseg ctpydinqml ncvgdhqaam qiireiinee aaewdvqhpi pgplpagqlr eprgsdiagt tstveeqiqw mfrpqnpvpv gniyrrwiqi glqkcvrmyn ptnildikqg pkepfqsyvd rfykslraeq tdpavknwmt qtllvqnanp dcklvlkglg mnptleemlt acqgvggpgq karlmaealk evigpapipf aaaqqrkafk cwncGKEGHS ARQCRAPRRQ gcwkcgkpgh imtncpdrqa gflglgpwgk kprnfpvaqv pqgltptapp vdpavdllek yMQQGKRQRE QRERPYKevt edllhleqge tpyreppted llhlnslfgk dq
| JOB-ID | P04590_113546ZiedEn8AAQEAAA8d1uUAAAAP |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P04590 |
| Description | sp|P04590|GAG_HV2RO Gag polyprotein OS=Human immunodeficiency virus type 2 subtype A (isolate ROD) OX=11720 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 522 |
| Download predictions | smoothed scores raw scores |