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>P04591_LOOPS
1-30, 43-54, 64-72, 120-149, 162-183, 210-239, 249-260, 275-294, 349-358, 381-425, 435-500
MGARASVLSG GELDRWEKIR LRPGGKKKYK lkhivwasre leRFAVNPGL LETSegcrqi lgqLQPSLQT GSeelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaaA DTGHSNQVSQ NYPIVQNIQG QMVHQAISPr tlnawvkvve eKAFSPEVIP MFSALSEGAT PQDlntmlnt vgghqaamqm lketineeaA EWDRVHPVHA GPIAPGQMRE PRGSDIAGTt stlqeqigWM TNNPPIPVGE iykrwiilgl nkivRMYSPT SILDIRQGPK EPFRdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtAC QGVGGPGHka rvlaeamsqv tnsatimmqr GNFRNQRKIV KCFNCGKEGH TARNCRAPRK KGCWKCGKEG HQMKDcterq anflGKIWPS YKGRPGNFLQ SRPEPTAPPE ESFRSGVETT TPPQKQEPID KELYPLTSLR SLFGNDPSSQ
>P04591_HOTLOOPS
1-32, 280-292, 394-411, 455-500
MGARASVLSG GELDRWEKIR LRPGGKKKYK LKhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieeeqnk skkkaqqaaa dtghsnqvsq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspT SILDIRQGPK EPfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrkiv kcfNCGKEGH TARNCRAPRK Kgcwkcgkeg hqmkdcterq anflgkiwps ykgrpgnflq srpePTAPPE ESFRSGVETT TPPQKQEPID KELYPLTSLR SLFGNDPSSQ
>P04591_REM465
1-9, 106-126, 451-475
MGARASVLSg geldrwekir lrpggkkkyk lkhivwasre lerfavnpgl letsegcrqi lgqlqpslqt gseelrslyn tvatlycvhq rieikdtkea ldkieEEQNK SKKKAQQAAA DTGHSNqvsq nypivqniqg qmvhqaispr tlnawvkvve ekafspevip mfsalsegat pqdlntmlnt vgghqaamqm lketineeaa ewdrvhpvha gpiapgqmre prgsdiagtt stlqeqigwm tnnppipvge iykrwiilgl nkivrmyspt sildirqgpk epfrdyvdrf yktlraeqas qevknwmtet llvqnanpdc ktilkalgpa atleemmtac qgvggpghka rvlaeamsqv tnsatimmqr gnfrnqrkiv kcfncgkegh tarncraprk kgcwkcgkeg hqmkdcterq anflgkiwps ykgrpgnflq SRPEPTAPPE ESFRSGVETT TPPQKqepid kelypltslr slfgndpssq
| JOB-ID | P04591_040941ZiCdBX8AAQEAADAZ1EYAAABU |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P04591 |
| Description | sp|P04591|GAG_HV1H2 Gag polyprotein OS=Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) OX=11706 GN=gag PE=1 SV=3 |
| Title/ID | none |
| Sequence length | 500 |
| Download predictions | smoothed scores raw scores |