Download PostScript file
>P08617_LOOPS
43-81, 135-203, 213-223, 231-250, 275-339, 356-440, 454-463, 476-574, 579-617, 627-634, 639-665, 679-694, 706-716, 726-762, 772-788, 818-835, 893-904, 915-930, 937-948, 1120-1129, 1181-1194, 1227-1238, 1250-1274, 1282-1307, 1312-1337, 1349-1366, 1422-1430, 1437-1450, 1480-1520, 1533-1541, 1551-1568, 1580-1590, 1605-1618, 1641-1657, 1663-1674, 1679-1698, 1752-1786, 1793-1807, 1831-1881, 1889-1911, 1919-1928, 1935-1962, 1975-1993, 2003-2014, 2029-2044, 2114-2134, 2143-2151
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gaSYFTSVDQ SSVHTAEVGS HQVEPLRTSV DKPGSKKTQG Ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqVQINPT PFQQGGLICA MVPGDQSYGS IASLTVYPHG LLNCNINNVV RIKVPFIYTR GAYHFKDPQY PVWeltirvw seLNIGTGTS AYTslnvlar FTDLELHGLT PLSTQMMRNE frvsttenvv nlsnyedara kmsfALDQED WKSDPSQGGG IKITHFTTWT SIPTLAAQFP FNASDSVGQQ IKVIPVDPYF FQMTNTNPDq kcitalasic qmfcfWRGDL VFDFQVFPTK YHSGRLLFCF VPGNELIDVS GITLKQATTA PCAVMDITGV QSTLRFRVPW ISDTPYRVNR YTKSAHQKGE ytaigklivy cynRLTSPSN VAShvrvnvy lsainLECFA PLYHAMDVTT QVGDDSGGFS TTVSTEQNVP DPQVGITTMK DLKGKANRGK MDVSGVQAPV GAITTIEDPV LAKKVPETFP ELKPGESRHT SDHMsiykFM GRSHFLCTFT FNSNNKEYTF PITLSSTSNP PHGLPSTlrw ffnlfqLYRG PLDLtiiiTG ATDVDGMAWF TPVGLAVDTP WVEKEsalsi dyktalgaVR FNTRRTGNIQ IRLPwysyly avsgaLDGLG DKTDSTfglv siqiaNYNHS DEYLSFSCYL SVTEQSEFYF PRAPLNSNAM LStesmmsri aAGDLESSVD DPRSEEDKrf eshiecrkpy kelrlevgkq rlkyaqeELS NEVLPPPRKM KGLFSqakis lfyteeheim kfswrgvtad tralrrfgfs laagrsvwtl emdagvltgr liRLNDEKWT EMKDdkivsl iekfTSNKYW SKVNFPHGML dleeiaANSK DFPNMSETdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv iqqlnqdehs hiigllrvmn yadigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklkdF YEVNYGKKKd ilnilkdnqq kiekaieead efcilqiqdv ekfeqyqkgv dliqklrtvh SMAQVDPNLM VHLSplrdci arvhqklknl gsinqamvtr cepvvcYLYG KRGGGKSLts ialatkickH YGVEPEKNIY TKPVASDYWD GYSGqlvcii dDIGQNTTDE DWSDFCQLVS GCPMRLNmas lEEKGRHFSS PFIIATSNWS NPSPKTVyvk eaidrrlhFK VEVKPASFFK NPHNDMlnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtefmelw sQGISDDDND savaefFQSF PSGEPSNSKL sgffqsvtnh kwvavgaavg ilgvlvggwF VYKHFSRKEE EPIPAEGVYH GVTKPKQVIK LDADPVESQS tleiaglvrk nlVQFGVGEK Ngcvrwvmna LGVKDDWLLV PSHAYKFEkd yemmefyfnR GGTYYSISAG nvviqsldvg fqdvVLMKVP TIPKFRDItq hfikkgdvpr alnrlatlvt TVNGTPMLIS EGPLKMEeka tyVHKKNDGT TVDLtvdqAW RGKGEGLPGM CGGALVSSnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nVVSKTLFRK SPIYHHIDKT MINFPAAMPF SKAEIDpmav mlSKYSLPIV EEPEDYKeas ifyqnkivgk tqlvddfldl DMAITGAPGI DAINMDSSPG FPYVQEKLTK RDLIWLDENG LLLGVHPRLA QrilfntvMM ENCSDLDVVF TTCPKDELRP LekvleskTR AIDACPLDys ilcrMYWGPA ISYFHLNPGF HTGVAIGIDP DRqwdelfkt mirfGDVGLD LDFSAFDASL SPFmireagr imSELSGTPS HFGTalinti iyskhllyNC CYHVCGSMPS GSPCtallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgMTATSAD KNVPQLKPVS ELTFlkrsfn lvEDRIRPAI Sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
>P08617_HOTLOOPS
55-77, 409-442, 503-516, 532-553, 558-571, 674-693, 774-802, 817-830, 869-905, 914-923, 1210-1219, 1252-1261, 1324-1335, 1356-1366, 1490-1502, 1551-1560, 1622-1631, 1638-1654, 1662-1673, 1911-1927, 2115-2151
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gasyftsvdq ssvhTAEVGS HQVEPLRTSV DKPGSKKtqg ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqvqinpt pfqqgglica mvpgdqsygs iasltvyphg llncninnvv rikvpfiytr gayhfkdpqy pvweltirvw selnigtgts aytslnvlar ftdlelhglt plstqmmrne frvsttenvv nlsnyedara kmsfaldqed wksdpsqggg ikithfttwt siptlaaqfp fnasdsvgqq ikvipvdpyf fqmtntnpdq kcitalasic qmfcfwrgdl vfdfqvfptk yhsgrllfcf vpgnelidvs gitlkqatta pcavmditGV QSTLRFRVPW ISDTPYRVNR YTKSAHQKGE YTaigklivy cynrltspsn vashvrvnvy lsainlecfa plyhamdvtt qvgddsggfs ttVSTEQNVP DPQVGIttmk dlkgkanrgk mDVSGVQAPV GAITTIEDPV LAKkvpeTFP ELKPGESRHT Sdhmsiykfm grshflctft fnsnnkeytf pitlsstsnp phglpstlrw ffnlfqlyrg pldltiiitg atdvdgmawf tpvglavdtp wvekesalsi dykTALGAVR FNTRRTGNIQ IRLpwysyly avsgaldglg dktdstfglv siqianynhs deylsfscyl svteqsefyf praplnsnam lstesmmsri aagDLESSVD DPRSEEDKRF ESHIECRKPY KElrlevgkq rlkyaqEELS NEVLPPPRKM kglfsqakis lfyteeheim kfswrgvtad tralrrfgFS LAAGRSVWTL EMDAGVLTGR LIRLNDEKWT EMKDDkivsl iekFTSNKYW SKVnfphgml dleeiaansk dfpnmsetdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv iqqlnqdehs hiigllrvmn yadigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklkdf yevnygkkkd ilnilkdnqq kiekaieead efcilqiqdv ekfeqyqkgv dliqklrtvh smaqvdpnlm vhlsplrdci arvhqklknL GSINQAMVTr cepvvcylyg krgggkslts ialatkickh yGVEPEKNIY Tkpvasdywd gysgqlvcii ddigqnttde dwsdfcqlvs gcpmrlnmas leekgrhfss pfiIATSNWS NPSPKtvyvk eaidrrlhfk vevkpASFFK NPHNDMlnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtefmelw sqgisdddnd savaeffqsf psgepsnskl sgffqsvtnh kwvavgaavg ilgvlvggwf vykhfsrkeE EPIPAEGVYH GVtkpkqvik ldadpvesqs tleiaglvrk nlvqfgvgek ngcvrwvmna LGVKDDWLLV pshaykfekd yemmefyfnr ggtyysisag nvviqsldvg fqdvvlmkvp tipkfrditq hFIKKGDVPR AlnrlatLVT TVNGTPMLIS EGPLkmeeka tYVHKKNDGT TVDltvdqaw rgkgeglpgm cggalvssnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nvvsktlfrk spiyhhidkt minfpaampf skaeidpmav mlskyslpiv eepedykeas ifyqnkivgk tqlvddfldl dmaitgapgi dainmdsspg fpyvqekltk rdliwldeng lllgvhprla qrilfntvmm encsdldvvf ttcpkdelrp LEKVLESKTR AIDACPLdys ilcrmywgpa isyfhlnpgf htgvaigidp drqwdelfkt mirfgdvgld ldfsafdasl spfmireagr imselsgtps hfgtalinti iyskhllync cyhvcgsmps gspctallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgmTATSAD KNVPQLKPVS ELTFLKRSFN LVEDRIRPAI Sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
>P08617_REM465
775-792
mnmsrqgifq tvgsgldhil sladieeeqm iqsvdrtavt gasyftsvdq ssvhtaevgs hqveplrtsv dkpgskktqg ekfflihsad wltthalfhe vakldvvkll yneqfavqgl lryhtyarfg ieiqvqinpt pfqqgglica mvpgdqsygs iasltvyphg llncninnvv rikvpfiytr gayhfkdpqy pvweltirvw selnigtgts aytslnvlar ftdlelhglt plstqmmrne frvsttenvv nlsnyedara kmsfaldqed wksdpsqggg ikithfttwt siptlaaqfp fnasdsvgqq ikvipvdpyf fqmtntnpdq kcitalasic qmfcfwrgdl vfdfqvfptk yhsgrllfcf vpgnelidvs gitlkqatta pcavmditgv qstlrfrvpw isdtpyrvnr ytksahqkge ytaigklivy cynrltspsn vashvrvnvy lsainlecfa plyhamdvtt qvgddsggfs ttvsteqnvp dpqvgittmk dlkgkanrgk mdvsgvqapv gaittiedpv lakkvpetfp elkpgesrht sdhmsiykfm grshflctft fnsnnkeytf pitlsstsnp phglpstlrw ffnlfqlyrg pldltiiitg atdvdgmawf tpvglavdtp wvekesalsi dyktalgavr fntrrtgniq irlpwysyly avsgaldglg dktdstfglv siqianynhs deylsfscyl svteqsefyf praplnsnam lstesmmsri aagdLESSVD DPRSEEDKRF EShiecrkpy kelrlevgkq rlkyaqeels nevlppprkm kglfsqakis lfyteeheim kfswrgvtad tralrrfgfs laagrsvwtl emdagvltgr lirlndekwt emkddkivsl iekftsnkyw skvnfphgml dleeiaansk dfpnmsetdl cfllhwlnpk kinladrmlg lsgvqeikeq gvgliaecrt fldsiagtlk smmfgfhhsv tveiintvlc fvksgillyv iqqlnqdehs hiigllrvmn yadigcsvis cgkvfskmle tvfnwqmdsr mmelrtqsfs nwlrdicsgi tifknfkdai ywlytklkdf yevnygkkkd ilnilkdnqq kiekaieead efcilqiqdv ekfeqyqkgv dliqklrtvh smaqvdpnlm vhlsplrdci arvhqklknl gsinqamvtr cepvvcylyg krgggkslts ialatkickh ygvepekniy tkpvasdywd gysgqlvcii ddigqnttde dwsdfcqlvs gcpmrlnmas leekgrhfss pfiiatsnws npspktvyvk eaidrrlhfk vevkpasffk nphndmlnvn laktndaikd mscvdlimdg hnvslmdlls slvmtveirk qnmtefmelw sqgisdddnd savaeffqsf psgepsnskl sgffqsvtnh kwvavgaavg ilgvlvggwf vykhfsrkee epipaegvyh gvtkpkqvik ldadpvesqs tleiaglvrk nlvqfgvgek ngcvrwvmna lgvkddwllv pshaykfekd yemmefyfnr ggtyysisag nvviqsldvg fqdvvlmkvp tipkfrditq hfikkgdvpr alnrlatlvt tvngtpmlis egplkmeeka tyvhkkndgt tvdltvdqaw rgkgeglpgm cggalvssnq siqnailgih vaggnsilva klvtqemfqn idkkiesqri mkveftqcsm nvvsktlfrk spiyhhidkt minfpaampf skaeidpmav mlskyslpiv eepedykeas ifyqnkivgk tqlvddfldl dmaitgapgi dainmdsspg fpyvqekltk rdliwldeng lllgvhprla qrilfntvmm encsdldvvf ttcpkdelrp lekvlesktr aidacpldys ilcrmywgpa isyfhlnpgf htgvaigidp drqwdelfkt mirfgdvgld ldfsafdasl spfmireagr imselsgtps hfgtalinti iyskhllync cyhvcgsmps gspctallns iinnvnlyyv fskifgkspv ffcqalkilc ygddvlivfs rdvqidnldl igqkivdefk klgmtatsad knvpqlkpvs eltflkrsfn lvedrirpai sektiwslia wqrsnaefeq nlenaqwfaf mhgyefyqkf yyfvqsclek emieyrlksy dwwrmrfydq cficdls
| JOB-ID | P08617_155634ZiPlsn8AAQEAACXMoBgAAAAO |
|---|---|
| Frames used | smooth=8 peak=8 join=4 |
| Thresholds used | coils=0.516 rem465=0.6 hot loops=0.1204 |
| Name | P08617 |
| Description | sp|P08617|POLG_HAVHM Genome polyprotein OS=Human hepatitis A virus genotype IB (isolate HM175) OX=12098 PE=1 SV=1 |
| Title/ID | none |
| Sequence length | 2227 |
| Download predictions | smoothed scores raw scores |